RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ATF7P17544 494 aaPredicted RBP11.08□□□□□ -0.64
NEDD9-203ENST00000397378 CALML3P27482 149 aa11.08□□□□□ -0.64
NEDD9-203ENST00000397378 NRIP1P48552 1158 aa11.08□□□□□ -0.64
NEDD9-203ENST00000397378 PSEN2P49810 448 aa11.08□□□□□ -0.64
NEDD9-203ENST00000397378 MRPL12P52815 198 aaKnown RBP11.08□□□□□ -0.64
NEDD9-203ENST00000397378 RPS6P62753 249 aaKnown RBP11.08□□□□□ -0.64
NEDD9-203ENST00000397378 ZNF200P98182 395 aaPredicted RBP11.08□□□□□ -0.64
NEDD9-203ENST00000397378 MTMR3Q13615 1198 aa11.08□□□□□ -0.64
NEDD9-203ENST00000397378 COL9A2Q14055 689 aaPredicted RBP11.08□□□□□ -0.64
NEDD9-203ENST00000397378 CCDC96Q2M329 555 aa11.08□□□□□ -0.64
NEDD9-203ENST00000397378 ASTLQ6HA08 431 aaPredicted RBP11.08□□□□□ -0.64
NEDD9-203ENST00000397378 TTBK2Q6IQ55 1244 aa11.08□□□□□ -0.64
NEDD9-203ENST00000397378 SLC30A10Q6XR72 485 aa11.08□□□□□ -0.64
NEDD9-203ENST00000397378 RNF207Q6ZRF8 634 aa11.08□□□□□ -0.64
NEDD9-203ENST00000397378 RBM23Q86U06 439 aaKnown RBP11.08□□□□□ -0.64
NEDD9-203ENST00000397378 KREMEN2Q8NCW0 462 aa11.08□□□□□ -0.64
NEDD9-203ENST00000397378 SEC62Q99442 399 aaKnown RBP11.08□□□□□ -0.64
NEDD9-203ENST00000397378 KATNAL1Q9BW62 490 aa11.08□□□□□ -0.64
NEDD9-203ENST00000397378 NCOR2Q9Y618 2525 aa11.08□□□□□ -0.64
NEDD9-203ENST00000397378 CFAP47Q6ZTR5 3102 aa11.08□□□□□ -0.64
NEDD9-203ENST00000397378 ADGRA3Q8IWK6 1321 aa11.08□□□□□ -0.64
NEDD9-203ENST00000397378 GLP2RO95838 553 aa11.07□□□□□ -0.64
NEDD9-203ENST00000397378 LMNAP02545 664 aaKnown RBP11.07□□□□□ -0.64
NEDD9-203ENST00000397378 SLC16A2P36021 539 aa11.07□□□□□ -0.64
NEDD9-203ENST00000397378 MFSD10Q14728 455 aa11.07□□□□□ -0.64
NEDD9-203ENST00000397378 ZMYM1Q5SVZ6 1142 aa11.07□□□□□ -0.64
NEDD9-203ENST00000397378 CCDC62Q6P9F0 684 aa11.07□□□□□ -0.64
NEDD9-203ENST00000397378 UBALD2Q8IYN6 164 aa11.07□□□□□ -0.64
NEDD9-203ENST00000397378 ANAPC4Q9UJX5 808 aa11.07□□□□□ -0.64
NEDD9-203ENST00000397378 WDR19Q8NEZ3 1342 aa11.07□□□□□ -0.64
NEDD9-203ENST00000397378 FOXP2O15409 715 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 ORC4O43929 436 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 RANBP6O60518 1105 aaKnown RBP11.06□□□□□ -0.64
NEDD9-203ENST00000397378 GH1P01241 217 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 FGRP09769 529 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 LINC00271P0C7V0 271 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 CTDSPL2Q05D32 466 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 CAMK1Q14012 370 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 BTG3Q14201 252 aaPredicted RBP11.06□□□□□ -0.64
NEDD9-203ENST00000397378 DGKDQ16760 1214 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 LY6KQ17RY6 165 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 KIAA0753Q2KHM9 967 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 TSHZ3Q63HK5 1081 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 RGS22Q8NE09 1264 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 PLVAPQ9BX97 442 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 MAF1Q9H063 256 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 TSHZ2Q9NRE2 1034 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 DLL3Q9NYJ7 618 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 PLAGL2Q9UPG8 496 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 SORCS3Q9UPU3 1222 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 MTMR7Q9Y216 660 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 TTC41PQ6P2S7 1318 aa11.06□□□□□ -0.64
NEDD9-203ENST00000397378 TPRP12270 2363 aaKnown RBP11.05□□□□□ -0.64
NEDD9-203ENST00000397378 BRD1O95696 1058 aa11.05□□□□□ -0.64
NEDD9-203ENST00000397378 CTSHP09668 335 aa11.05□□□□□ -0.64
NEDD9-203ENST00000397378 ZNF286BP0CG31 522 aa11.05□□□□□ -0.64
NEDD9-203ENST00000397378 TOP1P11387 765 aaKnown RBP11.05□□□□□ -0.64
NEDD9-203ENST00000397378 DNAJB1P25685 340 aa11.05□□□□□ -0.64
NEDD9-203ENST00000397378 ARHGAP1Q07960 439 aa11.05□□□□□ -0.64
NEDD9-203ENST00000397378 ANGPT1Q15389 498 aa11.05□□□□□ -0.64
NEDD9-203ENST00000397378 FLCNQ8NFG4 579 aa11.05□□□□□ -0.64
NEDD9-203ENST00000397378 SUSD6Q92537 303 aa11.05□□□□□ -0.64
NEDD9-203ENST00000397378 CLP1Q92989 425 aaKnown RBP11.05□□□□□ -0.64
NEDD9-203ENST00000397378 DCTPP1Q9H773 170 aa11.05□□□□□ -0.64
NEDD9-203ENST00000397378 TCP11L1Q9NUJ3 509 aa11.05□□□□□ -0.64
NEDD9-203ENST00000397378 KIAA1671Q9BY89 1806 aa11.05□□□□□ -0.64
NEDD9-203ENST00000397378 KAT6AQ92794 2004 aa11.04□□□□□ -0.64
NEDD9-203ENST00000397378 F2P00734 622 aa11.04□□□□□ -0.64
NEDD9-203ENST00000397378 PDHBP11177 359 aa11.04□□□□□ -0.64
NEDD9-203ENST00000397378 CLCN5P51795 746 aa11.04□□□□□ -0.64
NEDD9-203ENST00000397378 RBM10P98175 930 aaKnown RBP11.04□□□□□ -0.64
NEDD9-203ENST00000397378 SEPT14Q6ZU15 432 aa11.04□□□□□ -0.64
NEDD9-203ENST00000397378 SERINC5Q86VE9 423 aa11.04□□□□□ -0.64
NEDD9-203ENST00000397378 PI4K2BQ8TCG2 481 aa11.04□□□□□ -0.64
NEDD9-203ENST00000397378 APBB2Q92870 758 aa11.04□□□□□ -0.64
NEDD9-203ENST00000397378 P2RX5Q93086 422 aa11.04□□□□□ -0.64
NEDD9-203ENST00000397378 NEK1Q96PY6 1258 aa11.04□□□□□ -0.64
NEDD9-203ENST00000397378 TMEM47Q9BQJ4 181 aa11.04□□□□□ -0.64
NEDD9-203ENST00000397378 OSBPL7Q9BZF2 842 aa11.04□□□□□ -0.64
NEDD9-203ENST00000397378 SMOC2Q9H3U7 446 aa11.04□□□□□ -0.64
NEDD9-203ENST00000397378 TLE6Q9H808 572 aa11.04□□□□□ -0.64
NEDD9-203ENST00000397378 GPCPD1Q9NPB8 672 aa11.04□□□□□ -0.64
NEDD9-203ENST00000397378 RALYQ9UKM9 306 aaKnown RBP11.04□□□□□ -0.64
NEDD9-203ENST00000397378 ZNF292O60281 2723 aa11.04□□□□□ -0.64
NEDD9-203ENST00000397378 FRMPD2Q68DX3 1309 aaPredicted RBP11.04□□□□□ -0.64
NEDD9-203ENST00000397378 PER2O15055 1255 aa11.03□□□□□ -0.64
NEDD9-203ENST00000397378 ITGB1P05556 798 aa11.03□□□□□ -0.64
NEDD9-203ENST00000397378 SNHG28P0DPA3 235 aa11.03□□□□□ -0.64
NEDD9-203ENST00000397378 ZNF543Q08ER8 600 aa11.03□□□□□ -0.64
NEDD9-203ENST00000397378 HIC1Q14526 733 aa11.03□□□□□ -0.64
NEDD9-203ENST00000397378 ALX1Q15699 326 aa11.03□□□□□ -0.64
NEDD9-203ENST00000397378 RSPO4Q2I0M5 234 aaPredicted RBP11.03□□□□□ -0.64
NEDD9-203ENST00000397378 CYP2W1Q8TAV3 490 aa11.03□□□□□ -0.64
NEDD9-203ENST00000397378 POF1BQ8WVV4 589 aa11.03□□□□□ -0.64
NEDD9-203ENST00000397378 EMID1Q96A84 441 aaPredicted RBP11.03□□□□□ -0.64
NEDD9-203ENST00000397378 CHAMP1Q96JM3 812 aa11.03□□□□□ -0.64
NEDD9-203ENST00000397378 TTC14Q96N46 770 aa11.03□□□□□ -0.64
NEDD9-203ENST00000397378 APOL5Q9BWW9 433 aa11.03□□□□□ -0.64
NEDD9-203ENST00000397378 SEMA4AQ9H3S1 761 aa11.03□□□□□ -0.64
NEDD9-203ENST00000397378 NR2E1Q9Y466 385 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms