RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 ATP4AP20648 1035 aa12.06□□□□□ -0.48
NUP98-205ENST00000397007 CDK7P50613 346 aa12.06□□□□□ -0.48
NUP98-205ENST00000397007 RILPL1Q5EBL4 403 aa12.06□□□□□ -0.48
NUP98-205ENST00000397007 ATL3Q6DD88 541 aa12.06□□□□□ -0.48
NUP98-205ENST00000397007 METTL7BQ6UX53 244 aa12.06□□□□□ -0.48
NUP98-205ENST00000397007 LINC01465Q8N7H1 131 aa12.06□□□□□ -0.48
NUP98-205ENST00000397007 FAM20AQ96MK3 541 aa12.06□□□□□ -0.48
NUP98-205ENST00000397007 MMTAG2Q9BU76 263 aaKnown RBP12.06□□□□□ -0.48
NUP98-205ENST00000397007 MAFBQ9Y5Q3 323 aaPredicted RBP12.06□□□□□ -0.48
NUP98-205ENST00000397007 MMP3P08254 477 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 LY6KQ17RY6 165 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 TMEM87AQ8NBN3 555 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 KIF3AQ9Y496 699 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 CTDP1Q9Y5B0 961 aaPredicted RBP12.05□□□□□ -0.48
NUP98-205ENST00000397007 MYH11P35749 1972 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 SGPL1O95470 568 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 UBXN2AP68543 259 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 PDE4DQ08499 809 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 FCHSD1Q86WN1 690 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 FBXO2Q9UK22 296 aaPredicted RBP12.05□□□□□ -0.48
NUP98-205ENST00000397007 LYPLA2O95372 231 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 F2P00734 622 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 IRX5P78411 483 aaPredicted RBP12.05□□□□□ -0.48
NUP98-205ENST00000397007 GUCY1B3Q02153 619 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 MTMR1Q13613 665 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 HIC1Q14526 733 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 ARL6IP4Q66PJ3 421 aaKnown RBP12.05□□□□□ -0.48
NUP98-205ENST00000397007 RDM1Q8NG50 284 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 KCNN1Q92952 543 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 LENG1Q96BZ8 264 aaPredicted RBP12.05□□□□□ -0.48
NUP98-205ENST00000397007 IPO9Q96P70 1041 aaKnown RBP12.05□□□□□ -0.48
NUP98-205ENST00000397007 HSD17B14Q9BPX1 270 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 EHMT1Q9H9B1 1298 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 FAM184BQ9ULE4 1060 aa12.05□□□□□ -0.48
NUP98-205ENST00000397007 SLC26A4O43511 780 aa12.04□□□□□ -0.48
NUP98-205ENST00000397007 PURAQ00577 322 aaKnown RBP12.04□□□□□ -0.48
NUP98-205ENST00000397007 AXDND1Q5T1B0 1012 aaPredicted RBP12.04□□□□□ -0.48
NUP98-205ENST00000397007 ZNF746Q6NUN9 644 aaPredicted RBP12.04□□□□□ -0.48
NUP98-205ENST00000397007 COPS5Q92905 334 aa12.04□□□□□ -0.48
NUP98-205ENST00000397007 CDHR1Q96JP9 859 aa12.04□□□□□ -0.48
NUP98-205ENST00000397007 WRAP73Q9P2S5 460 aaPredicted RBP12.04□□□□□ -0.48
NUP98-205ENST00000397007 DNM1LO00429 736 aa12.04□□□□□ -0.48
NUP98-205ENST00000397007 NBR1Q14596 966 aa12.04□□□□□ -0.48
NUP98-205ENST00000397007 HSDL1Q3SXM5 330 aa12.04□□□□□ -0.48
NUP98-205ENST00000397007 RBL2Q08999 1139 aa12.04□□□□□ -0.48
NUP98-205ENST00000397007 LRRC41Q15345 812 aa12.04□□□□□ -0.48
NUP98-205ENST00000397007 LINC00301Q8NCQ3 95 aa12.04□□□□□ -0.48
NUP98-205ENST00000397007 GIMAP8Q8ND71 665 aaPredicted RBP12.04□□□□□ -0.48
NUP98-205ENST00000397007 DDX25Q9UHL0 483 aaKnown RBP12.04□□□□□ -0.48
NUP98-205ENST00000397007 SCN5AQ14524 2016 aa12.03□□□□□ -0.48
NUP98-205ENST00000397007 SPATA31C1P0DKV0 1188 aa12.03□□□□□ -0.48
NUP98-205ENST00000397007 BECN1Q14457 450 aa12.03□□□□□ -0.48
NUP98-205ENST00000397007 RALGAPA2Q2PPJ7 1873 aa12.03□□□□□ -0.48
NUP98-205ENST00000397007 SLC9C1Q4G0N8 1177 aa12.03□□□□□ -0.48
NUP98-205ENST00000397007 TTC38Q5R3I4 469 aa12.03□□□□□ -0.48
NUP98-205ENST00000397007 SAMD1Q6SPF0 538 aaPredicted RBP12.03□□□□□ -0.48
NUP98-205ENST00000397007 FAM184AQ8NB25 1140 aa12.03□□□□□ -0.48
NUP98-205ENST00000397007 UNC45AQ9H3U1 944 aa12.03□□□□□ -0.48
NUP98-205ENST00000397007 HMX1Q9NP08 348 aaPredicted RBP12.03□□□□□ -0.48
NUP98-205ENST00000397007 PDLIM7Q9NR12 457 aa12.03□□□□□ -0.48
NUP98-205ENST00000397007 RCOR1Q9UKL0 485 aa12.03□□□□□ -0.48
NUP98-205ENST00000397007 B4DLN1 442 aa12.03□□□□□ -0.48
NUP98-205ENST00000397007 EML1O00423 815 aa12.03□□□□□ -0.48
NUP98-205ENST00000397007 TNFAIP2Q03169 654 aa12.03□□□□□ -0.48
NUP98-205ENST00000397007 TTLL4Q14679 1199 aa12.03□□□□□ -0.48
NUP98-205ENST00000397007 TARBP2Q15633 366 aaKnown RBP12.03□□□□□ -0.48
NUP98-205ENST00000397007 TBC1D22BQ9NU19 505 aa12.03□□□□□ -0.48
NUP98-205ENST00000397007 CLIC4Q9Y696 253 aa12.03□□□□□ -0.48
NUP98-205ENST00000397007 PDIA5Q14554 519 aa12.02□□□□□ -0.48
NUP98-205ENST00000397007 SLC39A14Q15043 492 aa12.02□□□□□ -0.48
NUP98-205ENST00000397007 GJC2Q5T442 439 aaPredicted RBP12.02□□□□□ -0.48
NUP98-205ENST00000397007 USP28Q96RU2 1077 aa12.02□□□□□ -0.48
NUP98-205ENST00000397007 ELP1O95163 1332 aa12.02□□□□□ -0.48
NUP98-205ENST00000397007 IPO5O00410 1097 aaKnown RBP12.02□□□□□ -0.49
NUP98-205ENST00000397007 PPP6R2O75170 966 aa12.02□□□□□ -0.49
NUP98-205ENST00000397007 MUTP22033 750 aa12.02□□□□□ -0.49
NUP98-205ENST00000397007 SLC4A3P48751 1232 aa12.02□□□□□ -0.49
NUP98-205ENST00000397007 LAMC2Q13753 1193 aa12.02□□□□□ -0.49
NUP98-205ENST00000397007 PLPPR4Q7Z2D5 763 aa12.02□□□□□ -0.49
NUP98-205ENST00000397007 TLK2Q86UE8 772 aa12.02□□□□□ -0.49
NUP98-205ENST00000397007 NLRX1Q86UT6 975 aa12.02□□□□□ -0.49
NUP98-205ENST00000397007 VWCEQ96DN2 955 aa12.02□□□□□ -0.49
NUP98-205ENST00000397007 FTOQ9C0B1 505 aaKnown RBP eCLIP12.02□□□□□ -0.49
NUP98-205ENST00000397007 MRVI1Q9Y6F6 885 aa12.02□□□□□ -0.49
NUP98-205ENST00000397007 ANK1P16157 1881 aa12.02□□□□□ -0.49
NUP98-205ENST00000397007 CD4P01730 458 aa12.02□□□□□ -0.49
NUP98-205ENST00000397007 SMAP1Q8IYB5 467 aaPredicted RBP12.02□□□□□ -0.49
NUP98-205ENST00000397007 MPHOSPH6Q99547 160 aaKnown RBP12.02□□□□□ -0.49
NUP98-205ENST00000397007 GBF1Q92538 1859 aa12.02□□□□□ -0.49
NUP98-205ENST00000397007 KIAA1671Q9BY89 1806 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 GH1P01241 217 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 NEDD9Q14511 834 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 TRAF7Q6Q0C0 670 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 ZNF579Q8NAF0 562 aaKnown RBP12.01□□□□□ -0.49
NUP98-205ENST00000397007 BRMS1Q9HCU9 246 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 CCDC194A0A1B0GVG4 234 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 MOXD2PA6NHM9 499 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 YEATS4O95619 227 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 GRIN1Q05586 938 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 TRIM29Q14134 588 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms