RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 ALS2CR12Q96Q35 445 aa15.36■□□□□ 0.05
NUP98-204ENST00000397004 EYA3Q99504 573 aa15.36■□□□□ 0.05
NUP98-204ENST00000397004 TDRD12Q587J7 1177 aaKnown RBP15.36■□□□□ 0.05
NUP98-204ENST00000397004 EMC10Q5UCC4 262 aa15.36■□□□□ 0.05
NUP98-204ENST00000397004 GBP6Q6ZN66 633 aa15.36■□□□□ 0.05
NUP98-204ENST00000397004 SUGP1Q8IWZ8 645 aaKnown RBP15.36■□□□□ 0.05
NUP98-204ENST00000397004 CASP5P51878 434 aa15.36■□□□□ 0.05
NUP98-204ENST00000397004 LRRC63Q05C16 580 aa15.36■□□□□ 0.05
NUP98-204ENST00000397004 ITGB3BPQ13352 177 aaPredicted RBP15.36■□□□□ 0.05
NUP98-204ENST00000397004 NAA35Q5VZE5 725 aa15.36■□□□□ 0.05
NUP98-204ENST00000397004 FAM133AQ8N9E0 248 aa15.36■□□□□ 0.05
NUP98-204ENST00000397004 CALML4Q96GE6 196 aa15.36■□□□□ 0.05
NUP98-204ENST00000397004 RIOX1Q9H6W3 641 aa15.36■□□□□ 0.05
NUP98-204ENST00000397004 ABCB11O95342 1321 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 NOVP48745 357 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 AMPD3Q01432 767 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 CFAP221Q4G0U5 840 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 KDM7AQ6ZMT4 941 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 NELFCDQ8IXH7 590 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 RNF10Q8N5U6 811 aaKnown RBP15.35■□□□□ 0.05
NUP98-204ENST00000397004 LSM14BQ9BX40 385 aaKnown RBP15.35■□□□□ 0.05
NUP98-204ENST00000397004 GANQ9H2C0 597 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 C6orf50Q9HD87 102 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 MYH4Q9Y623 1939 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 MYH7BA7E2Y1 1941 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 HSF2BPO75031 334 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 LDHBP07195 334 aaKnown RBP15.35■□□□□ 0.05
NUP98-204ENST00000397004 MMS22LQ6ZRQ5 1243 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 C16orf86Q6ZW13 317 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 TRIM59Q8IWR1 403 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 SNX29Q8TEQ0 813 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 KCTD10Q9H3F6 313 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 ATP6V0A2Q9Y487 856 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 SPATA31A6Q5VVP1 1343 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 BTAF1O14981 1849 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 DCDC2CA8MYV0 355 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 OPA1O60313 960 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 PDHBP11177 359 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 PPP4CP60510 307 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 HDLBPQ00341 1268 aaKnown RBP15.35■□□□□ 0.05
NUP98-204ENST00000397004 CDC37Q16543 378 aaPredicted RBP15.35■□□□□ 0.05
NUP98-204ENST00000397004 CACNA2D4Q7Z3S7 1137 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 MREGQ8N565 214 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 OLIG1Q8TAK6 271 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 TANGO6Q9C0B7 1094 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 CEP72Q9P209 647 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 ZNF652Q9Y2D9 606 aa15.35■□□□□ 0.05
NUP98-204ENST00000397004 BHMG1C9JSJ3 638 aaPredicted RBP15.34■□□□□ 0.05
NUP98-204ENST00000397004 E9PMD0 336 aa15.34■□□□□ 0.05
NUP98-204ENST00000397004 NDUFAB1O14561 156 aa15.34■□□□□ 0.05
NUP98-204ENST00000397004 NAP1L1P55209 391 aaKnown RBP15.34■□□□□ 0.05
NUP98-204ENST00000397004 SLC18A3Q16572 532 aa15.34■□□□□ 0.05
NUP98-204ENST00000397004 NEDD1Q8NHV4 660 aa15.34■□□□□ 0.05
NUP98-204ENST00000397004 SCFD1Q8WVM8 642 aa15.34■□□□□ 0.05
NUP98-204ENST00000397004 COL4A3BPQ9Y5P4 624 aa15.34■□□□□ 0.05
NUP98-204ENST00000397004 HOXD13P35453 343 aa15.34■□□□□ 0.05
NUP98-204ENST00000397004 PAFAH1B1P43034 410 aa15.34■□□□□ 0.05
NUP98-204ENST00000397004 IRF2BP2Q7Z5L9 587 aa15.34■□□□□ 0.05
NUP98-204ENST00000397004 KLHL7Q8IXQ5 586 aa15.34■□□□□ 0.05
NUP98-204ENST00000397004 USP38Q8NB14 1042 aa15.34■□□□□ 0.05
NUP98-204ENST00000397004 RBM46Q8TBY0 533 aaKnown RBP15.34■□□□□ 0.05
NUP98-204ENST00000397004 STK17AQ9UEE5 414 aa15.34■□□□□ 0.05
NUP98-204ENST00000397004 ARFGEF1Q9Y6D6 1849 aa15.34■□□□□ 0.05
NUP98-204ENST00000397004 SERPING1P05155 500 aa15.34■□□□□ 0.05
NUP98-204ENST00000397004 RHBDL3P58872 404 aa15.34■□□□□ 0.05
NUP98-204ENST00000397004 PTK2Q05397 1052 aa15.34■□□□□ 0.05
NUP98-204ENST00000397004 KIAA0753Q2KHM9 967 aa15.34■□□□□ 0.05
NUP98-204ENST00000397004 ZNF571Q7Z3V5 609 aaPredicted RBP15.34■□□□□ 0.05
NUP98-204ENST00000397004 FAM170AA1A519 330 aa15.33■□□□□ 0.05
NUP98-204ENST00000397004 TRAF5O00463 557 aa15.33■□□□□ 0.05
NUP98-204ENST00000397004 GNA11P29992 359 aa15.33■□□□□ 0.05
NUP98-204ENST00000397004 EIF6P56537 245 aaKnown RBP15.33■□□□□ 0.05
NUP98-204ENST00000397004 PTGISQ16647 500 aa15.33■□□□□ 0.05
NUP98-204ENST00000397004 GLE1Q53GS7 698 aaKnown RBP15.33■□□□□ 0.05
NUP98-204ENST00000397004 IFT20Q8IY31 132 aa15.33■□□□□ 0.05
NUP98-204ENST00000397004 PRPF38AQ8NAV1 312 aaKnown RBP15.33■□□□□ 0.05
NUP98-204ENST00000397004 BACH1O14867 736 aa15.33■□□□□ 0.04
NUP98-204ENST00000397004 ARSHQ5FYA8 562 aa15.33■□□□□ 0.04
NUP98-204ENST00000397004 SFMBT2Q5VUG0 894 aa15.33■□□□□ 0.04
NUP98-204ENST00000397004 CD302Q8IX05 232 aa15.33■□□□□ 0.04
NUP98-204ENST00000397004 PLAAQ9Y263 795 aa15.33■□□□□ 0.04
NUP98-204ENST00000397004 LY75O60449 1722 aa15.33■□□□□ 0.04
NUP98-204ENST00000397004 ATAD5Q96QE3 1844 aa15.33■□□□□ 0.04
NUP98-204ENST00000397004 ITGA4P13612 1032 aa15.33■□□□□ 0.04
NUP98-204ENST00000397004 SLC9A1P19634 815 aa15.33■□□□□ 0.04
NUP98-204ENST00000397004 POLD1P28340 1107 aa15.33■□□□□ 0.04
NUP98-204ENST00000397004 PPP1R2P41236 205 aa15.33■□□□□ 0.04
NUP98-204ENST00000397004 TTBK2Q6IQ55 1244 aa15.33■□□□□ 0.04
NUP98-204ENST00000397004 CCDC70Q6NSX1 233 aa15.33■□□□□ 0.04
NUP98-204ENST00000397004 LRRC57Q8N9N7 239 aa15.33■□□□□ 0.04
NUP98-204ENST00000397004 ZNF473Q8WTR7 871 aaKnown RBP15.33■□□□□ 0.04
NUP98-204ENST00000397004 CCDC47Q96A33 483 aaKnown RBP15.33■□□□□ 0.04
NUP98-204ENST00000397004 EPN3Q9H201 632 aa15.33■□□□□ 0.04
NUP98-204ENST00000397004 IKZF4Q9H2S9 585 aa15.33■□□□□ 0.04
NUP98-204ENST00000397004 CNOT8Q9UFF9 292 aaKnown RBP15.33■□□□□ 0.04
NUP98-204ENST00000397004 QPCTQ16769 361 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 SLC9C1Q4G0N8 1177 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 CFAP58Q5T655 872 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 MYOCDQ8IZQ8 938 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 CNPY4Q8N129 248 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms