RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 EHD2Q9NZN4 543 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 NCK2O43639 380 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 BAG3O95817 575 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 GLI1P08151 1106 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 GNA11P29992 359 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 TECP42680 631 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 FXR2P51116 673 aaKnown RBP eCLIP14.7□□□□□ -0.06
TRIM40-207ENST00000396581 KCNMA1Q12791 1236 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 DIXDC1Q155Q3 683 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 LETM2Q2VYF4 491 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 CERS3Q8IU89 383 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 EIF1ADQ8N9N8 165 aaKnown RBP14.7□□□□□ -0.06
TRIM40-207ENST00000396581 C7orf43Q8WVR3 580 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 PIK3R5Q8WYR1 880 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 PNMA5Q96PV4 448 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 RIC8AQ9NPQ8 531 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 ESYT2A0FGR8 921 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 ZNF233A6NK53 670 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 RIMBP2O15034 1052 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 MYBP10242 640 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 CHRNA5P30532 468 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 GFPT1Q06210 699 aaPredicted RBP14.69□□□□□ -0.06
TRIM40-207ENST00000396581 PAK2Q13177 524 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 PSMD2Q13200 908 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 YTHDF3Q7Z739 585 aaKnown RBP14.69□□□□□ -0.06
TRIM40-207ENST00000396581 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.69□□□□□ -0.06
TRIM40-207ENST00000396581 TMEM47Q9BQJ4 181 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 SUGT1Q9Y2Z0 365 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 PCDHGC5Q9Y5F6 944 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 GPR75-ASB3A0A0A6YYF3 556 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 USP17L3A6NCW0 530 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 USP17L4A6NCW7 530 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 SLC1A4P43007 532 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 MATR3P43243 847 aaKnown RBP eCLIP14.69□□□□□ -0.06
TRIM40-207ENST00000396581 RASSF7Q02833 373 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 ZCWPW2Q504Y3 356 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 MCTP2Q6DN12 878 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 USP17L1Q7RTZ2 530 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 CNPY4Q8N129 248 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 INPP4AQ96PE3 977 aaPredicted RBP14.69□□□□□ -0.06
TRIM40-207ENST00000396581 EYA3Q99504 573 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 RTFDC1Q9BY42 306 aaPredicted RBP14.69□□□□□ -0.06
TRIM40-207ENST00000396581 C6orf50Q9HD87 102 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 CEP72Q9P209 647 aa14.69□□□□□ -0.06
TRIM40-207ENST00000396581 MYH10P35580 1976 aa14.68□□□□□ -0.06
TRIM40-207ENST00000396581 SMCO2A6NFE2 343 aa14.68□□□□□ -0.06
TRIM40-207ENST00000396581 KLRF2D3W0D1 207 aa14.68□□□□□ -0.06
TRIM40-207ENST00000396581 CES2O00748 559 aa14.68□□□□□ -0.06
TRIM40-207ENST00000396581 SERPING1P05155 500 aa14.68□□□□□ -0.06
TRIM40-207ENST00000396581 INPP5BP32019 993 aa14.68□□□□□ -0.06
TRIM40-207ENST00000396581 CARSP49589 748 aaKnown RBP14.68□□□□□ -0.06
TRIM40-207ENST00000396581 LIG3P49916 1009 aa14.68□□□□□ -0.06
TRIM40-207ENST00000396581 NAPAP54920 295 aa14.68□□□□□ -0.06
TRIM40-207ENST00000396581 GTF2IP78347 998 aa14.68□□□□□ -0.06
TRIM40-207ENST00000396581 MRPS25P82663 173 aaKnown RBP14.68□□□□□ -0.06
TRIM40-207ENST00000396581 NAB2Q15742 525 aa14.68□□□□□ -0.06
TRIM40-207ENST00000396581 PRPF38AQ8NAV1 312 aaKnown RBP14.68□□□□□ -0.06
TRIM40-207ENST00000396581 WHAMMQ8TF30 809 aa14.68□□□□□ -0.06
TRIM40-207ENST00000396581 LARP4BQ92615 738 aaKnown RBP14.68□□□□□ -0.06
TRIM40-207ENST00000396581 DYNLL2Q96FJ2 89 aa14.68□□□□□ -0.06
TRIM40-207ENST00000396581 PSMB7Q99436 277 aa14.68□□□□□ -0.06
TRIM40-207ENST00000396581 GGA2Q9UJY4 613 aa14.68□□□□□ -0.06
TRIM40-207ENST00000396581 TMEM59LQ9UK28 342 aa14.68□□□□□ -0.06
TRIM40-207ENST00000396581 TLR2O60603 784 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 NOL4O94818 638 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 HEXIM1O94992 359 aaKnown RBP14.67□□□□□ -0.06
TRIM40-207ENST00000396581 FSBPO95073 299 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 KRT14P02533 472 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 FAM153BP0C7A2 387 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 FNTAP49354 379 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 PDCLQ13371 301 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 FAM153CQ494X1 144 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 CFAP58Q5T655 872 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 MEI1Q5TIA1 1274 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 SLF2Q8IX21 1173 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 PLCD3Q8N3E9 789 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 TBCKQ8TEA7 893 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 MS4A14Q96JA4 679 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 CCDC43Q96MW1 224 aaKnown RBP14.67□□□□□ -0.06
TRIM40-207ENST00000396581 EPN3Q9H201 632 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 FAM153AQ9UHL3 310 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 GAKO14976 1311 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 BTNL10A8MVZ5 291 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 BHMG1C9JSJ3 638 aaPredicted RBP14.67□□□□□ -0.06
TRIM40-207ENST00000396581 NDUFAB1O14561 156 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 TSPY3P0CV98 308 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 TSPY8P0CW00 308 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 LSP1P33241 339 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 MARSP56192 900 aaKnown RBP14.67□□□□□ -0.06
TRIM40-207ENST00000396581 PDIA5Q14554 519 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 SKIDA1Q1XH10 827 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 SLC9C1Q4G0N8 1177 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 CC2D2BQ6DHV5 1058 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 KCNV1Q6PIU1 500 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 PODNQ7Z5L7 613 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 SH3RF3Q8TEJ3 882 aaPredicted RBP14.67□□□□□ -0.06
TRIM40-207ENST00000396581 RNPC3Q96LT9 517 aaKnown RBP14.67□□□□□ -0.06
TRIM40-207ENST00000396581 LRRC27Q9C0I9 530 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 MKNK2Q9HBH9 465 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 EPB41L5Q9HCM4 733 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms