RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 PAX7P23759 505 aa10.82□□□□□ -0.68
TRIM39-203ENST00000396547 IL6STP40189 918 aaPredicted RBP10.82□□□□□ -0.68
TRIM39-203ENST00000396547 KCNQ4P56696 695 aa10.82□□□□□ -0.68
TRIM39-203ENST00000396547 IFFO1Q0D2I5 559 aa10.82□□□□□ -0.68
TRIM39-203ENST00000396547 KCNB1Q14721 858 aa10.82□□□□□ -0.68
TRIM39-203ENST00000396547 NELFCDQ8IXH7 590 aa10.82□□□□□ -0.68
TRIM39-203ENST00000396547 CDK5RAP3Q96JB5 506 aa10.82□□□□□ -0.68
TRIM39-203ENST00000396547 DDX47Q9H0S4 455 aaKnown RBP10.82□□□□□ -0.68
TRIM39-203ENST00000396547 GGT7Q9UJ14 662 aa10.82□□□□□ -0.68
TRIM39-203ENST00000396547 TRAF5O00463 557 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 CALML3P27482 149 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 FLT3P36888 993 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 HSD17B3P37058 310 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 TRAPPC10P48553 1259 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 SMTNP53814 917 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 MAGOHP61326 146 aaKnown RBP10.81□□□□□ -0.68
TRIM39-203ENST00000396547 PPP1R7Q15435 360 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 KRT71Q3SY84 523 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 ARL6IP4Q66PJ3 421 aaKnown RBP10.81□□□□□ -0.68
TRIM39-203ENST00000396547 CYB5D1Q6P9G0 228 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 KIAA0895Q8NCT3 520 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 TCP11Q8WWU5 503 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 MAGOHBQ96A72 148 aaKnown RBP10.81□□□□□ -0.68
TRIM39-203ENST00000396547 ERGIC2Q96RQ1 377 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 LSM14BQ9BX40 385 aaKnown RBP10.81□□□□□ -0.68
TRIM39-203ENST00000396547 OSBPL7Q9BZF2 842 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 KBTBD4Q9NVX7 518 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 PCDHA4Q9UN74 947 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 EIF4E1BA6NMX2 242 aaKnown RBP10.81□□□□□ -0.68
TRIM39-203ENST00000396547 CLTAP09496 248 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 EZRP15311 586 aaKnown RBP10.81□□□□□ -0.68
TRIM39-203ENST00000396547 CRKLP46109 303 aaKnown RBP10.81□□□□□ -0.68
TRIM39-203ENST00000396547 TFAP4Q01664 338 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 CHRNDQ07001 517 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 ITGB3BPQ13352 177 aaPredicted RBP10.81□□□□□ -0.68
TRIM39-203ENST00000396547 HIBCHQ6NVY1 386 aaPredicted RBP10.81□□□□□ -0.68
TRIM39-203ENST00000396547 FAM133AQ8N9E0 248 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 SEC16BQ96JE7 1060 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 ANKRD31Q8N7Z5 1873 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 A6NNZ2 444 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 CDC25CP30307 473 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 ERVK-9P63128 1117 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 CACNB1Q02641 598 aaPredicted RBP10.81□□□□□ -0.68
TRIM39-203ENST00000396547 PRPF4BQ13523 1007 aaKnown RBP10.81□□□□□ -0.68
TRIM39-203ENST00000396547 TUBB8Q3ZCM7 444 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 SLC9C1Q4G0N8 1177 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 SFMBT2Q5VUG0 894 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 CACNA2D3Q8IZS8 1091 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 DYNLL2Q96FJ2 89 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 SELENOSQ9BQE4 189 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 CCDC113Q9H0I3 377 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 GDF3Q9NR23 364 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 CNOT8Q9UFF9 292 aaKnown RBP10.81□□□□□ -0.68
TRIM39-203ENST00000396547 FBXL5Q9UKA1 691 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 TPX2Q9ULW0 747 aaKnown RBP10.81□□□□□ -0.68
TRIM39-203ENST00000396547 PCDHA6Q9UN73 950 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 PCDHA8Q9Y5H6 950 aa10.81□□□□□ -0.68
TRIM39-203ENST00000396547 ECM29Q5VYK3 1845 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 USP17L3A6NCW0 530 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 USP17L4A6NCW7 530 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 HMGB1P1B2RPK0 211 aaPredicted RBP10.8□□□□□ -0.68
TRIM39-203ENST00000396547 PRLRP16471 622 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 TNNC1P63316 161 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 SUSD4Q5VX71 490 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 ZNF662Q6ZS27 426 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 USP17L1Q7RTZ2 530 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 SPATS2Q86XZ4 545 aaKnown RBP10.8□□□□□ -0.68
TRIM39-203ENST00000396547 GJA10Q969M2 543 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 MCM9Q9NXL9 1143 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 BIN2Q9UBW5 565 aaPredicted RBP10.8□□□□□ -0.68
TRIM39-203ENST00000396547 SIK3Q9Y2K2 1263 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 LEMD3Q9Y2U8 911 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 CD2APQ9Y5K6 639 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 DAPK3O43293 454 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 KIF5BP33176 963 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 EPS15P42566 896 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 NAPAP54920 295 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 RPS6KA1Q15418 735 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 MSL1Q68DK7 614 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 CNNM4Q6P4Q7 775 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 SV2BQ7L1I2 683 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 FUKQ8N0W3 1084 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 ARFGAP2Q8N6H7 521 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 RAPGEF5Q92565 580 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 THOC1Q96FV9 657 aaKnown RBP10.8□□□□□ -0.68
TRIM39-203ENST00000396547 CALML4Q96GE6 196 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 LRRC4CQ9HCJ2 640 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 RTCBQ9Y3I0 505 aaKnown RBP10.8□□□□□ -0.68
TRIM39-203ENST00000396547 AKAP11Q9UKA4 1901 aa10.8□□□□□ -0.68
TRIM39-203ENST00000396547 A0A087X0T9 212 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 MARCH6O60337 910 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 DDAH1O94760 285 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 USP17L8P0C7I0 530 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 FAM228BP0C875 321 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 KLHL30Q0D2K2 578 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 CDC37Q16543 378 aaPredicted RBP10.79□□□□□ -0.68
TRIM39-203ENST00000396547 MAN2A1Q16706 1144 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 FAM133BQ5BKY9 247 aaKnown RBP10.79□□□□□ -0.68
TRIM39-203ENST00000396547 PDXDC1Q6P996 788 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 CCDC84Q86UT8 332 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms