RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 NR2F2P24468 414 aa12.77□□□□□ -0.37
PDXDC1-202ENST00000396410 SHROOM1Q2M3G4 852 aaPredicted RBP12.77□□□□□ -0.37
PDXDC1-202ENST00000396410 CC2D1AQ6P1N0 951 aaPredicted RBP12.77□□□□□ -0.37
PDXDC1-202ENST00000396410 TRMT1LQ7Z2T5 733 aaKnown RBP12.77□□□□□ -0.37
PDXDC1-202ENST00000396410 HDXQ7Z353 690 aa12.77□□□□□ -0.37
PDXDC1-202ENST00000396410 LRRC53A6NM62 1247 aa12.77□□□□□ -0.37
PDXDC1-202ENST00000396410 EIF3CLB5ME19 914 aaKnown RBP12.77□□□□□ -0.37
PDXDC1-202ENST00000396410 PLSCR1O15162 318 aa12.77□□□□□ -0.37
PDXDC1-202ENST00000396410 TUBBP07437 444 aa12.77□□□□□ -0.37
PDXDC1-202ENST00000396410 VAV2P52735 878 aa12.77□□□□□ -0.37
PDXDC1-202ENST00000396410 TRIM58Q8NG06 486 aa12.77□□□□□ -0.37
PDXDC1-202ENST00000396410 ERGIC2Q96RQ1 377 aa12.77□□□□□ -0.37
PDXDC1-202ENST00000396410 EIF3CQ99613 913 aaKnown RBP12.77□□□□□ -0.37
PDXDC1-202ENST00000396410 PKD2L1Q9P0L9 805 aa12.77□□□□□ -0.37
PDXDC1-202ENST00000396410 SAMM50Q9Y512 469 aa12.77□□□□□ -0.37
PDXDC1-202ENST00000396410 RXRBP28702 533 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 KIF11P52732 1056 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 HAS1Q92839 578 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 IDI2Q9BXS1 227 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 NUCKS1Q9H1E3 243 aaKnown RBP12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 HDAC6Q9UBN7 1215 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 RABGAP1Q9Y3P9 1069 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 MYH1P12882 1939 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 ENTPD3O75355 529 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 LONRF2Q1L5Z9 754 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 STXBP4Q6ZWJ1 553 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 MYCT1Q8N699 235 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 PRMT6Q96LA8 375 aaPredicted RBP12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 PSMB7Q99436 277 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 DLEC1Q9Y238 1755 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 CCDC151A5D8V7 595 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 EPB41P11171 864 aaKnown RBP12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 TMEM119Q4V9L6 283 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 FAM83BQ5T0W9 1011 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 MIGA2Q7L4E1 593 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 SYCP3Q8IZU3 236 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 ANKRD13CQ8N6S4 541 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 PCDHA13Q9Y5I0 950 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 THSD7AQ9UPZ6 1657 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 ATP8B1O43520 1251 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 GAS7O60861 476 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 SRGAP2O75044 1071 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 DMTNQ08495 405 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 VPS36Q86VN1 386 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 BHMT2Q9H2M3 363 aa12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 ARMCX3Q9UH62 379 aaPredicted RBP12.76□□□□□ -0.37
PDXDC1-202ENST00000396410 CLSTN1O94985 981 aa12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 SMC1AQ14683 1233 aaKnown RBP12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 ASIC2Q16515 512 aa12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 KRT26Q7Z3Y9 468 aa12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 TAF4BQ92750 862 aa12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 DDX39AO00148 427 aaKnown RBP12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 ABL1P00519 1130 aa12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 OAS2P29728 719 aaKnown RBP12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 FAM193AP78312 1265 aa12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 KLHL30Q0D2K2 578 aa12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 LRCH2Q5VUJ6 765 aa12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 MKL1Q969V6 931 aa12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 FAM20AQ96MK3 541 aa12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 POLD4Q9HCU8 107 aa12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 MRPL11Q9Y3B7 192 aaKnown RBP12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 A0A1W2PQJ5 194 aa12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 ATP1A1P05023 1023 aaKnown RBP12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 AKT1S1Q96B36 256 aa12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 CEP63Q96MT8 703 aa12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 NOX5Q96PH1 765 aa12.75□□□□□ -0.37
PDXDC1-202ENST00000396410 FANCGO15287 622 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 XRCC5P13010 732 aaKnown RBP12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 NOP2P46087 812 aaKnown RBP12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 NOVP48745 357 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 RASSF7Q02833 373 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 SEPT11Q9NVA2 429 aaKnown RBP12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 FAM184BQ9ULE4 1060 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 PRR12Q9ULL5 1215 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 PCDHB13Q9Y5F0 798 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 BUB1O43683 1085 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 MED24O75448 989 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 TAL1P17542 331 aaPredicted RBP12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 HERVK_113P62684 666 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 PLS1Q14651 629 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 ECM1Q16610 540 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 RSRC2Q7L4I2 434 aaKnown RBP12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 SFR1Q86XK3 245 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 GLIS3Q8NEA6 775 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 ZFP91Q96JP5 570 aaPredicted RBP12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 DNAJC18Q9H819 358 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 ZNF446Q9NWS9 450 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 HERC5Q9UII4 1024 aaKnown RBP12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 PRPF6O94906 941 aaKnown RBP12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 MOCS3O95396 460 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 ARHGAP25P42331 645 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 CTTNQ14247 550 aaKnown RBP12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 MIIPQ5JXC2 388 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 HS2ST1Q7LGA3 356 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 CATSPER3Q86XQ3 398 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 NIM1KQ8IY84 436 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 RPGRIP1Q96KN7 1286 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 MRIQ9BWK5 157 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 CCDC66A2RUB6 948 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 CCDC155Q8N6L0 562 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms