RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 RAVER2Q9HCJ3 691 aaKnown RBP11.42□□□□□ -0.58
TUBB-208ENST00000396389 HPCAL4Q9UM19 191 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 FAM169AQ9Y6X4 670 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 WDR90Q96KV7 1748 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 CNTNAP5Q8WYK1 1306 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 A0A087WUV0 522 aaPredicted RBP11.42□□□□□ -0.58
TUBB-208ENST00000396389 ZNF185O15231 689 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 PPP1R11O60927 126 aaPredicted RBP11.42□□□□□ -0.58
TUBB-208ENST00000396389 CALM1P0DP23 149 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 CALM2P0DP24 149 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 CALM3P0DP25 149 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 ARHGAP25P42331 645 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 CDC37Q16543 378 aaPredicted RBP11.42□□□□□ -0.58
TUBB-208ENST00000396389 NBPF20Q3BBV1 942 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 ENOX1Q8TC92 643 aaKnown RBP11.42□□□□□ -0.58
TUBB-208ENST00000396389 CXorf56Q9H5V9 222 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 AS3MTQ9HBK9 375 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 SEC63Q9UGP8 760 aaKnown RBP11.42□□□□□ -0.58
TUBB-208ENST00000396389 PRR12Q9ULL5 1215 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 A0A1B0GTH6 734 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 FAM205CA6NFA0 338 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 AGPSO00116 658 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 AOC2O75106 756 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 PPP6R2O75170 966 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 FUT2Q10981 343 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 GPIHBP1Q8IV16 184 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 PLIN4Q96Q06 1357 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 SCN4AP35499 1836 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 CCL15-CCL14A0A0B4J2E2 113 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 POTEB2H3BUK9 544 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 MYO1FO00160 1098 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 MFAP3LO75121 409 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 IFNAR1P17181 557 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 HOXA13P31271 388 aaPredicted RBP11.41□□□□□ -0.58
TUBB-208ENST00000396389 TOB1P50616 345 aaPredicted RBP11.41□□□□□ -0.58
TUBB-208ENST00000396389 IRAK1P51617 712 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 STIM1Q13586 685 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 MORC3Q14149 939 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 PKN1Q16512 942 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 CCL15Q16663 113 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 QRICH1Q2TAL8 776 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 CCDC178Q5BJE1 867 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 CEP120Q8N960 986 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 JMYQ8N9B5 988 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 BCAS4Q8TDM0 211 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 MKL1Q969V6 931 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 PURBQ96QR8 312 aaKnown RBP11.41□□□□□ -0.58
TUBB-208ENST00000396389 PANX2Q96RD6 677 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 SPDYE5A6NIY4 337 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 ATP1A1P05023 1023 aaKnown RBP11.41□□□□□ -0.58
TUBB-208ENST00000396389 NAPAP54920 295 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 UBXN2AP68543 259 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 LDLRAD1Q5T700 205 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 SYDE2Q5VT97 1194 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 FBXL16Q8N461 479 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 KRI1Q8N9T8 703 aaKnown RBP11.41□□□□□ -0.58
TUBB-208ENST00000396389 TBC1D5Q92609 795 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 ANKS1AQ92625 1134 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 RRP36Q96EU6 259 aaKnown RBP11.41□□□□□ -0.58
TUBB-208ENST00000396389 KIAA1683Q9H0B3 1180 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 SH2D4AQ9H788 454 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 MAPK8IP1Q9UQF2 711 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 CTDP1Q9Y5B0 961 aaPredicted RBP11.41□□□□□ -0.58
TUBB-208ENST00000396389 PCDHB6Q9Y5E3 794 aa11.41□□□□□ -0.58
TUBB-208ENST00000396389 COL2A1P02458 1487 aaPredicted RBP11.41□□□□□ -0.58
TUBB-208ENST00000396389 CDKL5O76039 1030 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 FMNL1O95466 1100 aaPredicted RBP11.4□□□□□ -0.58
TUBB-208ENST00000396389 DPYDQ12882 1025 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 UBE2SQ16763 222 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 CCDC148Q8NFR7 591 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 EEF2KMTQ96G04 330 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 MED4Q9NPJ6 270 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 RBM28Q9NW13 759 aaKnown RBP11.4□□□□□ -0.58
TUBB-208ENST00000396389 PCDHA1Q9Y5I3 950 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 MYH8P13535 1937 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 A0A087X0B3 334 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 USP17L15C9J2P7 530 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 USP17L13C9JLJ4 530 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 USP17L11C9JVI0 530 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 USP17L18D6R9N7 530 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 USP17L22D6RA61 530 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 USP17L17D6RBQ6 530 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 USP17L19D6RCP7 530 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 USP17L20D6RJB6 530 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 ALAS1P13196 640 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 NLRP5P59047 1200 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 USP17L24Q0WX57 530 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 USP17L6PQ6QN14 398 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 SMCR8Q8TEV9 937 aaPredicted RBP11.4□□□□□ -0.58
TUBB-208ENST00000396389 EPSTI1Q96J88 318 aa11.4□□□□□ -0.58
TUBB-208ENST00000396389 JPH2Q9BR39 696 aaPredicted RBP11.4□□□□□ -0.58
TUBB-208ENST00000396389 SNHG28P0DPA3 235 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 SCG2P13521 617 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 USP14P54578 494 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 AMPD2Q01433 879 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 TRIM29Q14134 588 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 ASPRV1Q53RT3 343 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 MLKLQ8NB16 471 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 GMCL1P1Q8NEA9 526 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 P2RX7Q99572 595 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms