RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 ASGR1P07306 291 aa21.79■■□□□ 1.08
HOXA9-202ENST00000396345 U2AF2P26368 475 aaKnown RBP eCLIP21.79■■□□□ 1.08
HOXA9-202ENST00000396345 ACLYP53396 1101 aa21.79■■□□□ 1.08
HOXA9-202ENST00000396345 BECN1Q14457 450 aa21.79■■□□□ 1.08
HOXA9-202ENST00000396345 Q4G0T1 1027 aa21.79■■□□□ 1.08
HOXA9-202ENST00000396345 PPTC7Q8NI37 304 aa21.79■■□□□ 1.08
HOXA9-202ENST00000396345 FERMT2Q96AC1 680 aa21.79■■□□□ 1.08
HOXA9-202ENST00000396345 LENG9Q96B70 501 aa21.79■■□□□ 1.08
HOXA9-202ENST00000396345 NAP1L4Q99733 375 aaKnown RBP21.79■■□□□ 1.08
HOXA9-202ENST00000396345 ZNF577Q9BSK1 485 aa21.79■■□□□ 1.08
HOXA9-202ENST00000396345 CCNT1O60563 726 aaKnown RBP21.78■■□□□ 1.08
HOXA9-202ENST00000396345 MMP3P08254 477 aa21.78■■□□□ 1.08
HOXA9-202ENST00000396345 MYL3P08590 195 aa21.78■■□□□ 1.08
HOXA9-202ENST00000396345 COL6A1P12109 1028 aa21.78■■□□□ 1.08
HOXA9-202ENST00000396345 GCFC2P16383 781 aaKnown RBP21.78■■□□□ 1.08
HOXA9-202ENST00000396345 PPP4R3AQ6IN85 833 aa21.78■■□□□ 1.08
HOXA9-202ENST00000396345 SPRYD3Q8NCJ5 442 aa21.78■■□□□ 1.08
HOXA9-202ENST00000396345 MBOAT7Q96N66 472 aa21.78■■□□□ 1.08
HOXA9-202ENST00000396345 SDF4Q9BRK5 362 aa21.78■■□□□ 1.08
HOXA9-202ENST00000396345 SENP6Q9GZR1 1112 aaPredicted RBP21.78■■□□□ 1.08
HOXA9-202ENST00000396345 POLR3EQ9NVU0 708 aa21.78■■□□□ 1.08
HOXA9-202ENST00000396345 DDX25Q9UHL0 483 aaKnown RBP21.78■■□□□ 1.08
HOXA9-202ENST00000396345 NFASCO94856 1347 aa21.78■■□□□ 1.08
HOXA9-202ENST00000396345 TNRC18O15417 2968 aaPredicted RBP21.78■■□□□ 1.08
HOXA9-202ENST00000396345 A0A1W2PQ45 241 aaPredicted RBP21.77■■□□□ 1.08
HOXA9-202ENST00000396345 A0A1W2PQY0 241 aa21.77■■□□□ 1.08
HOXA9-202ENST00000396345 IPO5O00410 1097 aaKnown RBP21.77■■□□□ 1.08
HOXA9-202ENST00000396345 NOP56O00567 594 aaKnown RBP21.77■■□□□ 1.08
HOXA9-202ENST00000396345 ITGB3BPQ13352 177 aaPredicted RBP21.77■■□□□ 1.08
HOXA9-202ENST00000396345 HSDL1Q3SXM5 330 aa21.77■■□□□ 1.08
HOXA9-202ENST00000396345 UIMC1Q96RL1 719 aa21.77■■□□□ 1.08
HOXA9-202ENST00000396345 VPS37CA5D8V6 355 aaPredicted RBP21.76■■□□□ 1.07
HOXA9-202ENST00000396345 MSH4O15457 936 aa21.76■■□□□ 1.07
HOXA9-202ENST00000396345 KPNA6O60684 536 aa21.76■■□□□ 1.07
HOXA9-202ENST00000396345 SYT1P21579 422 aa21.76■■□□□ 1.07
HOXA9-202ENST00000396345 SP4Q02446 784 aa21.76■■□□□ 1.07
HOXA9-202ENST00000396345 DGKDQ16760 1214 aa21.76■■□□□ 1.07
HOXA9-202ENST00000396345 CXCL17Q6UXB2 119 aa21.76■■□□□ 1.07
HOXA9-202ENST00000396345 VTI1AQ96AJ9 217 aa21.76■■□□□ 1.07
HOXA9-202ENST00000396345 JPH1Q9HDC5 661 aaPredicted RBP21.76■■□□□ 1.07
HOXA9-202ENST00000396345 TBC1D22BQ9NU19 505 aa21.76■■□□□ 1.07
HOXA9-202ENST00000396345 SLC37A4O43826 429 aa21.75■■□□□ 1.07
HOXA9-202ENST00000396345 PPFIA4O75335 1185 aa21.75■■□□□ 1.07
HOXA9-202ENST00000396345 CABYRO75952 493 aa21.75■■□□□ 1.07
HOXA9-202ENST00000396345 ATP2B1P20020 1258 aa21.75■■□□□ 1.07
HOXA9-202ENST00000396345 GLT1D1Q96MS3 346 aa21.75■■□□□ 1.07
HOXA9-202ENST00000396345 GPR20Q99678 358 aa21.75■■□□□ 1.07
HOXA9-202ENST00000396345 SLC9A2Q9UBY0 812 aa21.75■■□□□ 1.07
HOXA9-202ENST00000396345 NOL7Q9UMY1 257 aaKnown RBP21.75■■□□□ 1.07
HOXA9-202ENST00000396345 DDX39AO00148 427 aaKnown RBP21.74■■□□□ 1.07
HOXA9-202ENST00000396345 DHX15O43143 795 aaKnown RBP21.74■■□□□ 1.07
HOXA9-202ENST00000396345 HOXD8P13378 290 aaPredicted RBP21.74■■□□□ 1.07
HOXA9-202ENST00000396345 PURAQ00577 322 aaKnown RBP21.74■■□□□ 1.07
HOXA9-202ENST00000396345 SLC5A5Q92911 643 aa21.74■■□□□ 1.07
HOXA9-202ENST00000396345 MTG1Q9BT17 334 aaPredicted RBP21.74■■□□□ 1.07
HOXA9-202ENST00000396345 STARD7Q9NQZ5 370 aa21.74■■□□□ 1.07
HOXA9-202ENST00000396345 TELO2Q9Y4R8 837 aa21.74■■□□□ 1.07
HOXA9-202ENST00000396345 ELP1O95163 1332 aa21.74■■□□□ 1.07
HOXA9-202ENST00000396345 WNT7AO00755 349 aa21.73■■□□□ 1.07
HOXA9-202ENST00000396345 TRAPPC10P48553 1259 aa21.73■■□□□ 1.07
HOXA9-202ENST00000396345 ATN1P54259 1190 aaPredicted RBP21.73■■□□□ 1.07
HOXA9-202ENST00000396345 ETNPPLQ8TBG4 499 aa21.73■■□□□ 1.07
HOXA9-202ENST00000396345 SEPT1Q8WYJ6 367 aa21.73■■□□□ 1.07
HOXA9-202ENST00000396345 STX6O43752 255 aa21.72■■□□□ 1.07
HOXA9-202ENST00000396345 TTC38Q5R3I4 469 aa21.72■■□□□ 1.07
HOXA9-202ENST00000396345 LRCH2Q5VUJ6 765 aa21.72■■□□□ 1.07
HOXA9-202ENST00000396345 SLC39A5Q6ZMH5 540 aa21.72■■□□□ 1.07
HOXA9-202ENST00000396345 POTEDQ86YR6 584 aa21.72■■□□□ 1.07
HOXA9-202ENST00000396345 GJA10Q969M2 543 aa21.72■■□□□ 1.07
HOXA9-202ENST00000396345 RIT2Q99578 217 aa21.72■■□□□ 1.07
HOXA9-202ENST00000396345 KCNMB3Q9NPA1 279 aa21.72■■□□□ 1.07
HOXA9-202ENST00000396345 TCEAL9Q9UHQ7 104 aa21.72■■□□□ 1.07
HOXA9-202ENST00000396345 A0A0U1RQG5 324 aaPredicted RBP21.71■■□□□ 1.07
HOXA9-202ENST00000396345 GSTTP1A0A1W2PQM5 241 aa21.71■■□□□ 1.07
HOXA9-202ENST00000396345 MARCH6O60337 910 aa21.71■■□□□ 1.07
HOXA9-202ENST00000396345 GAS7O60861 476 aa21.71■■□□□ 1.07
HOXA9-202ENST00000396345 ZNF286BP0CG31 522 aa21.71■■□□□ 1.07
HOXA9-202ENST00000396345 MCM7P33993 719 aa21.71■■□□□ 1.07
HOXA9-202ENST00000396345 ACTR2P61160 394 aa21.71■■□□□ 1.07
HOXA9-202ENST00000396345 ZNF174Q15697 407 aa21.71■■□□□ 1.07
HOXA9-202ENST00000396345 FAM20AQ96MK3 541 aa21.71■■□□□ 1.07
HOXA9-202ENST00000396345 HTATIP2Q9BUP3 242 aa21.71■■□□□ 1.07
HOXA9-202ENST00000396345 TEKT3Q9BXF9 490 aa21.71■■□□□ 1.07
HOXA9-202ENST00000396345 MTMR6Q9Y217 621 aa21.71■■□□□ 1.07
HOXA9-202ENST00000396345 TBX3O15119 743 aa21.7■■□□□ 1.06
HOXA9-202ENST00000396345 NEMFO60524 1076 aa21.7■■□□□ 1.06
HOXA9-202ENST00000396345 PSMD10O75832 226 aa21.7■■□□□ 1.06
HOXA9-202ENST00000396345 BAG4O95429 457 aaKnown RBP21.7■■□□□ 1.06
HOXA9-202ENST00000396345 CCNE2O96020 404 aa21.7■■□□□ 1.06
HOXA9-202ENST00000396345 LGALS2P05162 132 aa21.7■■□□□ 1.06
HOXA9-202ENST00000396345 TCF7P36402 384 aaPredicted RBP21.7■■□□□ 1.06
HOXA9-202ENST00000396345 TOB1P50616 345 aaPredicted RBP21.7■■□□□ 1.06
HOXA9-202ENST00000396345 PSMC6P62333 389 aa21.7■■□□□ 1.06
HOXA9-202ENST00000396345 KRT76Q01546 638 aa21.7■■□□□ 1.06
HOXA9-202ENST00000396345 ORC2Q13416 577 aaPredicted RBP21.7■■□□□ 1.06
HOXA9-202ENST00000396345 LRRC26Q2I0M4 334 aa21.7■■□□□ 1.06
HOXA9-202ENST00000396345 UTP14CQ5TAP6 766 aaKnown RBP21.7■■□□□ 1.06
HOXA9-202ENST00000396345 ZNF746Q6NUN9 644 aaPredicted RBP21.7■■□□□ 1.06
HOXA9-202ENST00000396345 BRAPQ7Z569 592 aa21.7■■□□□ 1.06
HOXA9-202ENST00000396345 FERMT3Q86UX7 667 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms