RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 NBNO60934 754 aa18.8■□□□□ 0.6
DDR1-229ENST00000396342 GJB5O95377 273 aa18.8■□□□□ 0.6
DDR1-229ENST00000396342 POU3F3P20264 500 aaPredicted RBP18.8■□□□□ 0.6
DDR1-229ENST00000396342 ANTXR2P58335 489 aa18.8■□□□□ 0.6
DDR1-229ENST00000396342 ZNF200P98182 395 aaPredicted RBP18.8■□□□□ 0.6
DDR1-229ENST00000396342 SP2Q02086 613 aa18.8■□□□□ 0.6
DDR1-229ENST00000396342 USP17L6PQ6QN14 398 aa18.8■□□□□ 0.6
DDR1-229ENST00000396342 MYOCDQ8IZQ8 938 aa18.8■□□□□ 0.6
DDR1-229ENST00000396342 GLG1Q92896 1179 aa18.8■□□□□ 0.6
DDR1-229ENST00000396342 HLA-CQ95604 372 aa18.8■□□□□ 0.6
DDR1-229ENST00000396342 GPRASP2Q96D09 838 aa18.8■□□□□ 0.6
DDR1-229ENST00000396342 VWCEQ96DN2 955 aa18.8■□□□□ 0.6
DDR1-229ENST00000396342 ESYT1Q9BSJ8 1104 aa18.8■□□□□ 0.6
DDR1-229ENST00000396342 SENP2Q9HC62 589 aa18.8■□□□□ 0.6
DDR1-229ENST00000396342 MTCH2Q9Y6C9 303 aa18.8■□□□□ 0.6
DDR1-229ENST00000396342 SCN10AQ9Y5Y9 1956 aa18.8■□□□□ 0.6
DDR1-229ENST00000396342 LCTP09848 1927 aa18.8■□□□□ 0.6
DDR1-229ENST00000396342 A0A0C4DFX4 3053 aa18.8■□□□□ 0.6
DDR1-229ENST00000396342 SH2B2O14492 632 aaPredicted RBP18.79■□□□□ 0.6
DDR1-229ENST00000396342 SLC27A2O14975 620 aa18.79■□□□□ 0.6
DDR1-229ENST00000396342 MAFGO15525 162 aa18.79■□□□□ 0.6
DDR1-229ENST00000396342 RPLP2P05387 115 aaKnown RBP18.79■□□□□ 0.6
DDR1-229ENST00000396342 ARHGAP4P98171 946 aa18.79■□□□□ 0.6
DDR1-229ENST00000396342 PTPROQ16827 1216 aa18.79■□□□□ 0.6
DDR1-229ENST00000396342 HEATR3Q7Z4Q2 680 aa18.79■□□□□ 0.6
DDR1-229ENST00000396342 APBB2Q92870 758 aa18.79■□□□□ 0.6
DDR1-229ENST00000396342 YME1L1Q96TA2 773 aa18.79■□□□□ 0.6
DDR1-229ENST00000396342 GPR20Q99678 358 aa18.79■□□□□ 0.6
DDR1-229ENST00000396342 AZI2Q9H6S1 392 aa18.79■□□□□ 0.6
DDR1-229ENST00000396342 RBM28Q9NW13 759 aaKnown RBP18.79■□□□□ 0.6
DDR1-229ENST00000396342 FRMPD4Q14CM0 1322 aa18.78■□□□□ 0.6
DDR1-229ENST00000396342 NRCAMQ92823 1304 aa18.78■□□□□ 0.6
DDR1-229ENST00000396342 RFXAPO00287 272 aa18.78■□□□□ 0.6
DDR1-229ENST00000396342 DEFB103AP81534 67 aa18.78■□□□□ 0.6
DDR1-229ENST00000396342 MRPS9P82933 396 aaKnown RBP18.78■□□□□ 0.6
DDR1-229ENST00000396342 MTMR1Q13613 665 aa18.78■□□□□ 0.6
DDR1-229ENST00000396342 KRT32Q14532 448 aa18.78■□□□□ 0.6
DDR1-229ENST00000396342 CREB3L3Q68CJ9 461 aa18.78■□□□□ 0.6
DDR1-229ENST00000396342 TAF2Q6P1X5 1199 aa18.78■□□□□ 0.6
DDR1-229ENST00000396342 MICU3Q86XE3 530 aa18.78■□□□□ 0.6
DDR1-229ENST00000396342 TEX2Q8IWB9 1127 aa18.78■□□□□ 0.6
DDR1-229ENST00000396342 CCDC82Q8N4S0 544 aa18.78■□□□□ 0.6
DDR1-229ENST00000396342 FANCBQ8NB91 859 aa18.78■□□□□ 0.6
DDR1-229ENST00000396342 SAMD11Q96NU1 681 aa18.78■□□□□ 0.6
DDR1-229ENST00000396342 CTAGE1Q96RT6 745 aa18.78■□□□□ 0.6
DDR1-229ENST00000396342 GLT8D2Q9H1C3 349 aa18.78■□□□□ 0.6
DDR1-229ENST00000396342 RNPEPQ9H4A4 650 aa18.78■□□□□ 0.6
DDR1-229ENST00000396342 SETD4Q9NVD3 440 aa18.78■□□□□ 0.6
DDR1-229ENST00000396342 MTUS1Q9ULD2 1270 aa18.78■□□□□ 0.6
DDR1-229ENST00000396342 NAP1L2Q9ULW6 460 aaPredicted RBP18.78■□□□□ 0.6
DDR1-229ENST00000396342 CTSHP09668 335 aa18.77■□□□□ 0.6
DDR1-229ENST00000396342 GRB10Q13322 594 aa18.77■□□□□ 0.6
DDR1-229ENST00000396342 DBF4BQ8NFT6 615 aa18.77■□□□□ 0.6
DDR1-229ENST00000396342 SEPT1Q8WYJ6 367 aa18.77■□□□□ 0.6
DDR1-229ENST00000396342 GPKOWQ92917 476 aaPredicted RBP eCLIP18.77■□□□□ 0.6
DDR1-229ENST00000396342 SDF4Q9BRK5 362 aa18.77■□□□□ 0.6
DDR1-229ENST00000396342 ERAP1Q9NZ08 941 aa18.77■□□□□ 0.6
DDR1-229ENST00000396342 M0QZ92 97 aa18.76■□□□□ 0.59
DDR1-229ENST00000396342 TREHO43280 583 aa18.76■□□□□ 0.59
DDR1-229ENST00000396342 PLEKHA8P1O95397 391 aa18.76■□□□□ 0.59
DDR1-229ENST00000396342 TCF7P36402 384 aaPredicted RBP18.76■□□□□ 0.59
DDR1-229ENST00000396342 PPFIA1Q13136 1202 aa18.76■□□□□ 0.59
DDR1-229ENST00000396342 SLC35G1Q2M3R5 365 aa18.76■□□□□ 0.59
DDR1-229ENST00000396342 TRIM71Q2Q1W2 868 aaKnown RBP18.76■□□□□ 0.59
DDR1-229ENST00000396342 SRBD1Q8N5C6 995 aaKnown RBP18.76■□□□□ 0.59
DDR1-229ENST00000396342 FBXO22Q8NEZ5 403 aa18.76■□□□□ 0.59
DDR1-229ENST00000396342 LSG1Q9H089 658 aaKnown RBP18.76■□□□□ 0.59
DDR1-229ENST00000396342 SMARCAD1Q9H4L7 1026 aa18.76■□□□□ 0.59
DDR1-229ENST00000396342 TCEAL9Q9UHQ7 104 aa18.76■□□□□ 0.59
DDR1-229ENST00000396342 TAF6LQ9Y6J9 622 aa18.76■□□□□ 0.59
DDR1-229ENST00000396342 MEIS2O14770 477 aa18.75■□□□□ 0.59
DDR1-229ENST00000396342 FOSP01100 380 aaPredicted RBP18.75■□□□□ 0.59
DDR1-229ENST00000396342 HMGB1P09429 215 aaKnown RBP18.75■□□□□ 0.59
DDR1-229ENST00000396342 RXRAP19793 462 aa18.75■□□□□ 0.59
DDR1-229ENST00000396342 ZNF76P36508 570 aa18.75■□□□□ 0.59
DDR1-229ENST00000396342 NAPAP54920 295 aa18.75■□□□□ 0.59
DDR1-229ENST00000396342 ERVK-21P61565 698 aa18.75■□□□□ 0.59
DDR1-229ENST00000396342 PLEKHG4Q58EX7 1191 aa18.75■□□□□ 0.59
DDR1-229ENST00000396342 CENPQQ7L2Z9 268 aaPredicted RBP18.75■□□□□ 0.59
DDR1-229ENST00000396342 NEK1Q96PY6 1258 aa18.75■□□□□ 0.59
DDR1-229ENST00000396342 CCDC196A0A1B0GTZ2 297 aa18.74■□□□□ 0.59
DDR1-229ENST00000396342 LINC01553A4QN01 128 aa18.74■□□□□ 0.59
DDR1-229ENST00000396342 RRN3P2A6NIE6 340 aa18.74■□□□□ 0.59
DDR1-229ENST00000396342 hCG_1984214I3L0E3 225 aa18.74■□□□□ 0.59
DDR1-229ENST00000396342 UPP2O95045 317 aa18.74■□□□□ 0.59
DDR1-229ENST00000396342 BMP2KLQ5H9B9 411 aa18.74■□□□□ 0.59
DDR1-229ENST00000396342 PPP1R18Q6NYC8 613 aa18.74■□□□□ 0.59
DDR1-229ENST00000396342 TMTC3Q6ZXV5 915 aa18.74■□□□□ 0.59
DDR1-229ENST00000396342 TMCO2Q7Z6W1 182 aaPredicted RBP18.74■□□□□ 0.59
DDR1-229ENST00000396342 CMTR1Q8N1G2 835 aaKnown RBP18.74■□□□□ 0.59
DDR1-229ENST00000396342 ZNF713Q8N859 430 aaPredicted RBP18.74■□□□□ 0.59
DDR1-229ENST00000396342 IFIH1Q9BYX4 1025 aaKnown RBP18.74■□□□□ 0.59
DDR1-229ENST00000396342 PKD2L1Q9P0L9 805 aa18.74■□□□□ 0.59
DDR1-229ENST00000396342 PCDHA6Q9UN73 950 aa18.74■□□□□ 0.59
DDR1-229ENST00000396342 PCDHA8Q9Y5H6 950 aa18.74■□□□□ 0.59
DDR1-229ENST00000396342 LAMA2P24043 3122 aaKnown RBP18.74■□□□□ 0.59
DDR1-229ENST00000396342 LCHNA4D1U4 455 aa18.73■□□□□ 0.59
DDR1-229ENST00000396342 ZBTB43O43298 467 aa18.73■□□□□ 0.59
DDR1-229ENST00000396342 ADCY7P51828 1080 aa18.73■□□□□ 0.59
DDR1-229ENST00000396342 GPNMBQ14956 572 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms