RNA–Protein interactions for RNA: ENST00000396039.1

PARD6B-202, Transcript of par-6 family cell polarity regulator beta, humanhuman

TSL 1 (best) BASIC

Gene PARD6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6B-202ENST00000396039 SMARCC2Q8TAQ2 1214 aa25.49■■□□□ 1.67
PARD6B-202ENST00000396039 IGDCC4Q8TDY8 1250 aa25.49■■□□□ 1.67
PARD6B-202ENST00000396039 ATP6V0A1Q93050 837 aa25.49■■□□□ 1.67
PARD6B-202ENST00000396039 EPOPA6NHQ4 379 aa25.48■■□□□ 1.67
PARD6B-202ENST00000396039 HOXC8P31273 242 aa25.48■■□□□ 1.67
PARD6B-202ENST00000396039 THPOP40225 353 aa25.48■■□□□ 1.67
PARD6B-202ENST00000396039 GRB10Q13322 594 aa25.48■■□□□ 1.67
PARD6B-202ENST00000396039 TRAF7Q6Q0C0 670 aa25.48■■□□□ 1.67
PARD6B-202ENST00000396039 ZNF654Q8IZM8 581 aa25.48■■□□□ 1.67
PARD6B-202ENST00000396039 TGS1Q96RS0 853 aaKnown RBP25.48■■□□□ 1.67
PARD6B-202ENST00000396039 SENP7Q9BQF6 1050 aa25.48■■□□□ 1.67
PARD6B-202ENST00000396039 SENP2Q9HC62 589 aa25.48■■□□□ 1.67
PARD6B-202ENST00000396039 SPATA31C2B4DYI2 1134 aa25.47■■□□□ 1.67
PARD6B-202ENST00000396039 PIK3CDO00329 1044 aa25.47■■□□□ 1.67
PARD6B-202ENST00000396039 SORBS3O60504 671 aa25.47■■□□□ 1.67
PARD6B-202ENST00000396039 AMHP03971 560 aa25.47■■□□□ 1.67
PARD6B-202ENST00000396039 ANTXR2P58335 489 aa25.47■■□□□ 1.67
PARD6B-202ENST00000396039 MRPS9P82933 396 aaKnown RBP25.47■■□□□ 1.67
PARD6B-202ENST00000396039 ZNF200P98182 395 aaPredicted RBP25.47■■□□□ 1.67
PARD6B-202ENST00000396039 PCNX4Q63HM2 1172 aa25.47■■□□□ 1.67
PARD6B-202ENST00000396039 NLRX1Q86UT6 975 aa25.47■■□□□ 1.67
PARD6B-202ENST00000396039 TMEM87BQ96K49 555 aa25.47■■□□□ 1.67
PARD6B-202ENST00000396039 INSL6Q9Y581 213 aa25.47■■□□□ 1.67
PARD6B-202ENST00000396039 RBM8AQ9Y5S9 174 aaKnown RBP25.47■■□□□ 1.67
PARD6B-202ENST00000396039 ARHGEF15O94989 841 aa25.46■■□□□ 1.67
PARD6B-202ENST00000396039 SMIM10L2AP0DMW4 78 aa25.46■■□□□ 1.67
PARD6B-202ENST00000396039 SMIM10L2BP0DMW5 78 aa25.46■■□□□ 1.67
PARD6B-202ENST00000396039 CALM1P0DP23 149 aa25.46■■□□□ 1.67
PARD6B-202ENST00000396039 CALM2P0DP24 149 aa25.46■■□□□ 1.67
PARD6B-202ENST00000396039 CALM3P0DP25 149 aa25.46■■□□□ 1.67
PARD6B-202ENST00000396039 BMP1P13497 986 aa25.46■■□□□ 1.67
PARD6B-202ENST00000396039 MCM5P33992 734 aa25.46■■□□□ 1.67
PARD6B-202ENST00000396039 WNT8BQ93098 351 aa25.46■■□□□ 1.67
PARD6B-202ENST00000396039 CDHR1Q96JP9 859 aa25.46■■□□□ 1.67
PARD6B-202ENST00000396039 LY9Q9HBG7 655 aa25.46■■□□□ 1.67
PARD6B-202ENST00000396039 REV3LO60673 3130 aa25.45■■□□□ 1.66
PARD6B-202ENST00000396039 LCHNA4D1U4 455 aa25.45■■□□□ 1.66
PARD6B-202ENST00000396039 CCDC69A6NI79 296 aa25.45■■□□□ 1.66
PARD6B-202ENST00000396039 ERVK-21P61565 698 aa25.45■■□□□ 1.66
PARD6B-202ENST00000396039 MBTPS1Q14703 1052 aa25.45■■□□□ 1.66
PARD6B-202ENST00000396039 CYFIP1Q7L576 1253 aa25.45■■□□□ 1.66
PARD6B-202ENST00000396039 GPKOWQ92917 476 aaPredicted RBP eCLIP25.45■■□□□ 1.66
PARD6B-202ENST00000396039 HLA-CQ95604 372 aa25.45■■□□□ 1.66
PARD6B-202ENST00000396039 TFF2Q03403 129 aa25.44■■□□□ 1.66
PARD6B-202ENST00000396039 PLEKHG4Q58EX7 1191 aa25.44■■□□□ 1.66
PARD6B-202ENST00000396039 NFXL1Q6ZNB6 911 aa25.44■■□□□ 1.66
PARD6B-202ENST00000396039 PIBF1Q8WXW3 757 aa25.44■■□□□ 1.66
PARD6B-202ENST00000396039 SEPT8Q92599 483 aa25.44■■□□□ 1.66
PARD6B-202ENST00000396039 GPR20Q99678 358 aa25.44■■□□□ 1.66
PARD6B-202ENST00000396039 TAF6LQ9Y6J9 622 aa25.44■■□□□ 1.66
PARD6B-202ENST00000396039 PRC1O43663 620 aa25.43■■□□□ 1.66
PARD6B-202ENST00000396039 LPXNO60711 386 aa25.43■■□□□ 1.66
PARD6B-202ENST00000396039 DBF4BQ8NFT6 615 aa25.43■■□□□ 1.66
PARD6B-202ENST00000396039 APBB2Q92870 758 aa25.43■■□□□ 1.66
PARD6B-202ENST00000396039 ZFP91Q96JP5 570 aaPredicted RBP25.43■■□□□ 1.66
PARD6B-202ENST00000396039 SAMD11Q96NU1 681 aa25.43■■□□□ 1.66
PARD6B-202ENST00000396039 RNPEPQ9H4A4 650 aa25.43■■□□□ 1.66
PARD6B-202ENST00000396039 BRWD1Q9NSI6 2320 aa25.43■■□□□ 1.66
PARD6B-202ENST00000396039 COL4A6Q14031 1691 aa25.42■■□□□ 1.66
PARD6B-202ENST00000396039 LINC01553A4QN01 128 aa25.42■■□□□ 1.66
PARD6B-202ENST00000396039 TREHO43280 583 aa25.42■■□□□ 1.66
PARD6B-202ENST00000396039 LIFRP42702 1097 aa25.42■■□□□ 1.66
PARD6B-202ENST00000396039 HIC1Q14526 733 aa25.42■■□□□ 1.66
PARD6B-202ENST00000396039 TMCO2Q7Z6W1 182 aaPredicted RBP25.42■■□□□ 1.66
PARD6B-202ENST00000396039 MYOCDQ8IZQ8 938 aa25.42■■□□□ 1.66
PARD6B-202ENST00000396039 GDPD5Q8WTR4 605 aa25.42■■□□□ 1.66
PARD6B-202ENST00000396039 GPRASP2Q96D09 838 aa25.42■■□□□ 1.66
PARD6B-202ENST00000396039 RTEL1Q9NZ71 1219 aa25.42■■□□□ 1.66
PARD6B-202ENST00000396039 XIRP2A4UGR9 3374 aa25.42■■□□□ 1.66
PARD6B-202ENST00000396039 NRCAMQ92823 1304 aa25.41■■□□□ 1.66
PARD6B-202ENST00000396039 RALGAPA2Q2PPJ7 1873 aa25.41■■□□□ 1.66
PARD6B-202ENST00000396039 NLRC5Q86WI3 1866 aa25.41■■□□□ 1.66
PARD6B-202ENST00000396039 MEIS2O14770 477 aa25.41■■□□□ 1.66
PARD6B-202ENST00000396039 SEMA3FQ13275 785 aa25.41■■□□□ 1.66
PARD6B-202ENST00000396039 KRT40Q6A162 431 aa25.41■■□□□ 1.66
PARD6B-202ENST00000396039 USP17L6PQ6QN14 398 aa25.41■■□□□ 1.66
PARD6B-202ENST00000396039 SH2B2O14492 632 aaPredicted RBP25.4■■□□□ 1.66
PARD6B-202ENST00000396039 KCNQ1P51787 676 aa25.4■■□□□ 1.66
PARD6B-202ENST00000396039 MKRN4PQ13434 485 aaPredicted RBP25.4■■□□□ 1.66
PARD6B-202ENST00000396039 TCTN1Q2MV58 587 aa25.4■■□□□ 1.66
PARD6B-202ENST00000396039 MYL10Q9BUA6 226 aa25.4■■□□□ 1.66
PARD6B-202ENST00000396039 C1QTNF1Q9BXJ1 281 aa25.4■■□□□ 1.66
PARD6B-202ENST00000396039 PSTPIP2Q9H939 334 aa25.4■■□□□ 1.66
PARD6B-202ENST00000396039 EHMT1Q9H9B1 1298 aa25.4■■□□□ 1.66
PARD6B-202ENST00000396039 SUGCTQ9HAC7 445 aa25.4■■□□□ 1.66
PARD6B-202ENST00000396039 HTRA4P83105 476 aaPredicted RBP25.39■■□□□ 1.66
PARD6B-202ENST00000396039 FAM117BQ6P1L5 589 aa25.39■■□□□ 1.66
PARD6B-202ENST00000396039 TEX2Q8IWB9 1127 aa25.39■■□□□ 1.66
PARD6B-202ENST00000396039 FBXO22Q8NEZ5 403 aa25.39■■□□□ 1.66
PARD6B-202ENST00000396039 SP7Q8TDD2 431 aaPredicted RBP25.39■■□□□ 1.66
PARD6B-202ENST00000396039 MTUS1Q9ULD2 1270 aa25.39■■□□□ 1.66
PARD6B-202ENST00000396039 SLC12A7Q9Y666 1083 aa25.39■■□□□ 1.66
PARD6B-202ENST00000396039 SPDYE3A6NKU9 549 aa25.38■■□□□ 1.65
PARD6B-202ENST00000396039 MAFGO15525 162 aa25.38■■□□□ 1.65
PARD6B-202ENST00000396039 RPLP2P05387 115 aaKnown RBP25.38■■□□□ 1.65
PARD6B-202ENST00000396039 ARHGAP4P98171 946 aa25.38■■□□□ 1.65
PARD6B-202ENST00000396039 UTP14CQ5TAP6 766 aaKnown RBP25.38■■□□□ 1.65
PARD6B-202ENST00000396039 TAF2Q6P1X5 1199 aa25.38■■□□□ 1.65
PARD6B-202ENST00000396039 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.38■■□□□ 1.651e-6■■□□□ 12.2
PARD6B-202ENST00000396039 SPRED2Q7Z698 418 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms