RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 DKC1O60832 514 aaKnown RBP eCLIP4.71□□□□□ -1.66
HERC4-204ENST00000395198 MICAL2O94851 1124 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 BAG2O95816 211 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 POU2F2P09086 479 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 TCF7P36402 384 aaPredicted RBP4.71□□□□□ -1.66
HERC4-204ENST00000395198 GRIK3Q13003 919 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 SART3Q15020 963 aaKnown RBP4.71□□□□□ -1.66
HERC4-204ENST00000395198 SYCP1Q15431 976 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 DBN1Q16643 649 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 AARDQ4LEZ3 155 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 RNF135Q8IUD6 432 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 NFATC2IPQ8NCF5 419 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 SCG3Q8WXD2 468 aaKnown RBP4.71□□□□□ -1.66
HERC4-204ENST00000395198 ASB12Q8WXK4 309 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 ANAPC16Q96DE5 110 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 FAM129BQ96TA1 746 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 SLC26A6Q9BXS9 759 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 KIAA1683Q9H0B3 1180 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 BRD8Q9H0E9 1235 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 SMARCAD1Q9H4L7 1026 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 DNAJC18Q9H819 358 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 FBRSQ9HAH7 460 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 DKK3Q9UBP4 350 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 FRMPD2Q68DX3 1309 aaPredicted RBP4.71□□□□□ -1.66
HERC4-204ENST00000395198 ZNF189O75820 626 aaPredicted RBP4.71□□□□□ -1.66
HERC4-204ENST00000395198 MYBP10242 640 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 ALAS2P22557 587 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 ATP5DP30049 168 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 CDC25CP30307 473 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 USP8P40818 1118 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 ZAP70P43403 619 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 WDR73Q6P4I2 378 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 LARP1Q6PKG0 1096 aaKnown RBP4.71□□□□□ -1.66
HERC4-204ENST00000395198 CAND1Q86VP6 1230 aaKnown RBP4.71□□□□□ -1.66
HERC4-204ENST00000395198 FAM9CQ8IZT9 166 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 ANKRD52Q8NB46 1076 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 BSNDQ8WZ55 320 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 CENPIQ92674 756 aaPredicted RBP4.71□□□□□ -1.66
HERC4-204ENST00000395198 NT5C1BQ96P26 610 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 CORO1BQ9BR76 489 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 TACO1Q9BSH4 297 aaKnown RBP4.71□□□□□ -1.66
HERC4-204ENST00000395198 CCDC106Q9BWC9 280 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 ADAM33Q9BZ11 813 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 MTMR12Q9C0I1 747 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 TRMT13Q9NUP7 481 aaKnown RBP4.71□□□□□ -1.66
HERC4-204ENST00000395198 GRID1Q9ULK0 1009 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 ZNF804BA4D1E1 1349 aa4.71□□□□□ -1.66
HERC4-204ENST00000395198 MRC2Q9UBG0 1479 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 PSDA5PKW4 1024 aaPredicted RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 GAKO14976 1311 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 SMAD7O15105 426 aaKnown RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 CYP2A6P11509 494 aaPredicted RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 HNRNPMP52272 730 aaKnown RBP eCLIP4.7□□□□□ -1.668e-8■■■■■ 31.1
HERC4-204ENST00000395198 BYSLQ13895 437 aaKnown RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 CLUL1Q15846 466 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 FGD5Q6ZNL6 1462 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 LRRC71Q8N4P6 559 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.7□□□□□ -1.66
HERC4-204ENST00000395198 ZNF280CQ8ND82 737 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 LRRC59Q96AG4 307 aaKnown RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 CLUHP3Q96NS8 147 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 SEC62Q99442 399 aaKnown RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 TTLL2Q9BWV7 592 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 WDR12Q9GZL7 423 aaKnown RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 SYNCQ9H7C4 482 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 BRD9Q9H8M2 597 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 ITM2CQ9NQX7 267 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 KCNH4Q9UQ05 1017 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 CHD1O14646 1710 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 RAPGEF2Q9Y4G8 1499 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 KDM2BQ8NHM5 1336 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 A8MVJ9 347 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 RIPK2O43353 540 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 SIN3BO75182 1162 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 SLITRK5O94991 958 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 ADCY5O95622 1261 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 ACTN2P35609 894 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 ZNF252P-AS1Q0IIN9 211 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 USP4Q13107 963 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 NR6A1Q15406 480 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 PERM1Q5SV97 790 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 ZNF600Q6ZNG1 722 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 HOOK3Q86VS8 718 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 CEP97Q8IW35 865 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 THAP3Q8WTV1 239 aaPredicted RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 MPHOSPH8Q99549 860 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 DDX23Q9BUQ8 820 aaKnown RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 PHF20Q9BVI0 1012 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 EDEM3Q9BZQ6 932 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 VPS37BQ9H9H4 285 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 ATP13A1Q9HD20 1204 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 PRKAG3Q9UGI9 489 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 ADGRE2Q9UHX3 823 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 KIAA1257Q9ULG3 409 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 TRAF3IP3Q9Y228 551 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 E2F8A0AVK6 867 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 ENO4A6NNW6 628 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 CHURC1-FNTBB4DL54 471 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 MAFO75444 373 aaPredicted RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 ENDOD1O94919 500 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms