RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 STAT3P40763 770 aa22.77■■□□□ 1.23
CLK3-202ENST00000395066 FAM26FQ5R3K3 315 aa22.77■■□□□ 1.23
CLK3-202ENST00000395066 ICE2Q659A1 982 aa22.77■■□□□ 1.23
CLK3-202ENST00000395066 HAUS3Q68CZ6 603 aa22.77■■□□□ 1.23
CLK3-202ENST00000395066 TSEN2Q8NCE0 465 aaKnown RBP22.77■■□□□ 1.23
CLK3-202ENST00000395066 TBC1D16Q8TBP0 767 aa22.77■■□□□ 1.23
CLK3-202ENST00000395066 COL4A3BPQ9Y5P4 624 aa22.77■■□□□ 1.23
CLK3-202ENST00000395066 MYH7BA7E2Y1 1941 aa22.76■■□□□ 1.23
CLK3-202ENST00000395066 POTEB3A0JP26 581 aa22.76■■□□□ 1.23
CLK3-202ENST00000395066 POTECB2RU33 542 aa22.76■■□□□ 1.23
CLK3-202ENST00000395066 PDIA5Q14554 519 aa22.76■■□□□ 1.23
CLK3-202ENST00000395066 ZCWPW2Q504Y3 356 aa22.76■■□□□ 1.23
CLK3-202ENST00000395066 ASPRV1Q53RT3 343 aa22.76■■□□□ 1.23
CLK3-202ENST00000395066 TTC19Q6DKK2 380 aaPredicted RBP22.76■■□□□ 1.23
CLK3-202ENST00000395066 POTEBQ6S5H4 581 aa22.76■■□□□ 1.23
CLK3-202ENST00000395066 GAKO14976 1311 aa22.76■■□□□ 1.23
CLK3-202ENST00000395066 ESYT3A0FGR9 886 aa22.76■■□□□ 1.23
CLK3-202ENST00000395066 SCNN1DP51172 638 aa22.76■■□□□ 1.23
CLK3-202ENST00000395066 FAM83BQ5T0W9 1011 aa22.76■■□□□ 1.23
CLK3-202ENST00000395066 RIC8AQ9NPQ8 531 aa22.76■■□□□ 1.23
CLK3-202ENST00000395066 PCDHA12Q9UN75 941 aa22.76■■□□□ 1.23
CLK3-202ENST00000395066 FGFR1OPO95684 399 aaKnown RBP22.75■■□□□ 1.23
CLK3-202ENST00000395066 ZNF543Q08ER8 600 aa22.75■■□□□ 1.23
CLK3-202ENST00000395066 PTPROQ16827 1216 aa22.75■■□□□ 1.23
CLK3-202ENST00000395066 C15orf52Q6ZUT6 534 aaKnown RBP22.75■■□□□ 1.23
CLK3-202ENST00000395066 PACSIN1Q9BY11 444 aa22.75■■□□□ 1.23
CLK3-202ENST00000395066 POLD4Q9HCU8 107 aa22.75■■□□□ 1.23
CLK3-202ENST00000395066 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.75■■□□□ 1.23
CLK3-202ENST00000395066 ATP2B4P23634 1241 aa22.75■■□□□ 1.23
CLK3-202ENST00000395066 IRAK1P51617 712 aa22.75■■□□□ 1.23
CLK3-202ENST00000395066 GABPAQ06546 454 aa22.75■■□□□ 1.23
CLK3-202ENST00000395066 PNMA6FA0A0J9YX94 578 aa22.74■■□□□ 1.23
CLK3-202ENST00000395066 FAM196BA6NMK8 535 aa22.74■■□□□ 1.23
CLK3-202ENST00000395066 SNHG28P0DPA3 235 aa22.74■■□□□ 1.23
CLK3-202ENST00000395066 FKBP3Q00688 224 aaKnown RBP22.74■■□□□ 1.23
CLK3-202ENST00000395066 ORC2Q13416 577 aaPredicted RBP22.74■■□□□ 1.23
CLK3-202ENST00000395066 TADA2BQ86TJ2 420 aa22.74■■□□□ 1.23
CLK3-202ENST00000395066 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.74■■□□□ 1.23
CLK3-202ENST00000395066 FAM107BQ9H098 131 aa22.74■■□□□ 1.23
CLK3-202ENST00000395066 LRRC4BQ9NT99 713 aa22.74■■□□□ 1.23
CLK3-202ENST00000395066 CPP00450 1065 aa22.74■■□□□ 1.23
CLK3-202ENST00000395066 TCP1P17987 556 aaKnown RBP22.74■■□□□ 1.23
CLK3-202ENST00000395066 PPFIA1Q13136 1202 aa22.74■■□□□ 1.23
CLK3-202ENST00000395066 RAPGEF1Q13905 1077 aa22.74■■□□□ 1.23
CLK3-202ENST00000395066 TBC1D5Q92609 795 aa22.74■■□□□ 1.23
CLK3-202ENST00000395066 A0A087WUV0 522 aaPredicted RBP22.73■■□□□ 1.23
CLK3-202ENST00000395066 PALMO75781 387 aa22.73■■□□□ 1.23
CLK3-202ENST00000395066 KLRC1P26715 233 aa22.73■■□□□ 1.23
CLK3-202ENST00000395066 SFMBT2Q5VUG0 894 aa22.73■■□□□ 1.23
CLK3-202ENST00000395066 NOX5Q96PH1 765 aa22.73■■□□□ 1.23
CLK3-202ENST00000395066 NHSQ6T4R5 1651 aa22.73■■□□□ 1.23
CLK3-202ENST00000395066 TTLL1O95922 423 aa22.73■■□□□ 1.23
CLK3-202ENST00000395066 TAL1P17542 331 aaPredicted RBP22.73■■□□□ 1.23
CLK3-202ENST00000395066 CCT5P48643 541 aa22.73■■□□□ 1.23
CLK3-202ENST00000395066 CLK2P49760 499 aaKnown RBP22.73■■□□□ 1.23
CLK3-202ENST00000395066 SNAP25P60880 206 aa22.73■■□□□ 1.23
CLK3-202ENST00000395066 HERC4Q5GLZ8 1057 aaPredicted RBP22.73■■□□□ 1.23
CLK3-202ENST00000395066 GPBP1Q86WP2 473 aa22.73■■□□□ 1.23
CLK3-202ENST00000395066 CERS5Q8N5B7 392 aa22.73■■□□□ 1.23
CLK3-202ENST00000395066 FAM133AQ8N9E0 248 aa22.73■■□□□ 1.23
CLK3-202ENST00000395066 CUL5Q93034 780 aa22.73■■□□□ 1.23
CLK3-202ENST00000395066 IQCDQ96DY2 449 aa22.73■■□□□ 1.23
CLK3-202ENST00000395066 FAM163AQ96GL9 167 aaPredicted RBP22.73■■□□□ 1.23
CLK3-202ENST00000395066 PSTPIP2Q9H939 334 aa22.73■■□□□ 1.23
CLK3-202ENST00000395066 STIM2Q9P246 746 aa22.73■■□□□ 1.23
CLK3-202ENST00000395066 PJA2O43164 708 aa22.72■■□□□ 1.23
CLK3-202ENST00000395066 GTF2A1P52655 376 aaPredicted RBP22.72■■□□□ 1.23
CLK3-202ENST00000395066 PPP4R3AQ6IN85 833 aa22.72■■□□□ 1.23
CLK3-202ENST00000395066 C8orf74Q6P047 294 aa22.72■■□□□ 1.23
CLK3-202ENST00000395066 ZNF572Q7Z3I7 529 aaPredicted RBP22.72■■□□□ 1.23
CLK3-202ENST00000395066 RUBCNQ92622 972 aa22.72■■□□□ 1.23
CLK3-202ENST00000395066 GOLPH3Q9H4A6 298 aa22.72■■□□□ 1.23
CLK3-202ENST00000395066 A0A087X0T9 212 aa22.72■■□□□ 1.23
CLK3-202ENST00000395066 IGKV6D-41A0A0C4DH26 115 aa22.72■■□□□ 1.23
CLK3-202ENST00000395066 FAM228BP0C875 321 aa22.72■■□□□ 1.23
CLK3-202ENST00000395066 ACTN1P12814 892 aa22.72■■□□□ 1.23
CLK3-202ENST00000395066 CASP5P51878 434 aa22.72■■□□□ 1.23
CLK3-202ENST00000395066 ITIH3Q06033 890 aa22.72■■□□□ 1.23
CLK3-202ENST00000395066 SLC9C1Q4G0N8 1177 aa22.72■■□□□ 1.23
CLK3-202ENST00000395066 SCFD1Q8WVM8 642 aa22.72■■□□□ 1.23
CLK3-202ENST00000395066 CAPS2Q9BXY5 557 aa22.72■■□□□ 1.23
CLK3-202ENST00000395066 ADAMTS1Q9UHI8 967 aa22.72■■□□□ 1.23
CLK3-202ENST00000395066 ABCB11O95342 1321 aa22.71■■□□□ 1.23
CLK3-202ENST00000395066 POTEFA5A3E0 1075 aa22.71■■□□□ 1.23
CLK3-202ENST00000395066 GOLGA8KD6RF30 607 aa22.71■■□□□ 1.23
CLK3-202ENST00000395066 hCG_1984214I3L0E3 225 aa22.71■■□□□ 1.23
CLK3-202ENST00000395066 SERPINB2P05120 415 aa22.71■■□□□ 1.23
CLK3-202ENST00000395066 GLI1P08151 1106 aa22.71■■□□□ 1.23
CLK3-202ENST00000395066 PLA2G4BP0C869 781 aa22.71■■□□□ 1.23
CLK3-202ENST00000395066 POTEIP0CG38 1075 aa22.71■■□□□ 1.23
CLK3-202ENST00000395066 PRLRP16471 622 aa22.71■■□□□ 1.23
CLK3-202ENST00000395066 PAFAH1B1P43034 410 aa22.71■■□□□ 1.23
CLK3-202ENST00000395066 PSMD2Q13200 908 aa22.71■■□□□ 1.23
CLK3-202ENST00000395066 VPS72Q15906 364 aa22.71■■□□□ 1.23
CLK3-202ENST00000395066 POTEGQ6S5H5 508 aa22.71■■□□□ 1.23
CLK3-202ENST00000395066 POTEEQ6S8J3 1075 aa22.71■■□□□ 1.23
CLK3-202ENST00000395066 ZNF713Q8N859 430 aaPredicted RBP22.71■■□□□ 1.23
CLK3-202ENST00000395066 BCAS3Q9H6U6 928 aa22.71■■□□□ 1.23
CLK3-202ENST00000395066 CEP72Q9P209 647 aa22.71■■□□□ 1.23
CLK3-202ENST00000395066 SERPINB13Q9UIV8 391 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms