RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 TGFBRAP1Q8WUH2 860 aa15.73■□□□□ 0.11
CLIP2-203ENST00000395060 GDF3Q9NR23 364 aa15.73■□□□□ 0.11
CLIP2-203ENST00000395060 CNOT8Q9UFF9 292 aaKnown RBP15.73■□□□□ 0.11
CLIP2-203ENST00000395060 DNM1LO00429 736 aa15.73■□□□□ 0.11
CLIP2-203ENST00000395060 SLC37A4O43826 429 aa15.73■□□□□ 0.11
CLIP2-203ENST00000395060 CCDC172P0C7W6 258 aa15.73■□□□□ 0.11
CLIP2-203ENST00000395060 GRB10Q13322 594 aa15.73■□□□□ 0.11
CLIP2-203ENST00000395060 ITGB3BPQ13352 177 aaPredicted RBP15.73■□□□□ 0.11
CLIP2-203ENST00000395060 NBPF9Q3BBW0 867 aa15.73■□□□□ 0.11
CLIP2-203ENST00000395060 CCDC84Q86UT8 332 aaPredicted RBP15.73■□□□□ 0.11
CLIP2-203ENST00000395060 ZNF444Q8N0Y2 327 aaPredicted RBP15.73■□□□□ 0.11
CLIP2-203ENST00000395060 PIGSQ96S52 555 aa15.73■□□□□ 0.11
CLIP2-203ENST00000395060 DDX20Q9UHI6 824 aaKnown RBP15.73■□□□□ 0.11
CLIP2-203ENST00000395060 FBXL5Q9UKA1 691 aa15.73■□□□□ 0.11
CLIP2-203ENST00000395060 A0A1W2PQJ5 194 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 PPP1R12BO60237 982 aaPredicted RBP15.72■□□□□ 0.11
CLIP2-203ENST00000395060 SOGA3Q5TF21 947 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 CENPPQ6IPU0 288 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 LINC00116Q8NCU8 138 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 LARP4BQ92615 738 aaKnown RBP15.72■□□□□ 0.11
CLIP2-203ENST00000395060 NGLY1Q96IV0 654 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 BLOC1S4Q9NUP1 217 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 SUFUQ9UMX1 484 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 TNNI2P48788 182 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 MAGOHP61326 146 aaKnown RBP15.72■□□□□ 0.11
CLIP2-203ENST00000395060 PARP10Q53GL7 1025 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 SPTY2D1Q68D10 685 aaPredicted RBP15.72■□□□□ 0.11
CLIP2-203ENST00000395060 CPLX4Q7Z7G2 160 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 CLEC10AQ8IUN9 316 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 MAGOHBQ96A72 148 aaKnown RBP15.72■□□□□ 0.11
CLIP2-203ENST00000395060 C7orf25Q9BPX7 421 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 BARHL2Q9NY43 387 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 GRID2IPA4D2P6 1211 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 LLGL1Q15334 1064 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 KRT71Q3SY84 523 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 NEK8Q86SG6 692 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 TMEM47Q9BQJ4 181 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 OSBPL7Q9BZF2 842 aa15.72■□□□□ 0.11
CLIP2-203ENST00000395060 IFFO1Q0D2I5 559 aa15.71■□□□□ 0.11
CLIP2-203ENST00000395060 RPS6KA1Q15418 735 aa15.71■□□□□ 0.11
CLIP2-203ENST00000395060 UAP1Q16222 522 aaPredicted RBP15.71■□□□□ 0.11
CLIP2-203ENST00000395060 CALCRLQ16602 461 aa15.71■□□□□ 0.11
CLIP2-203ENST00000395060 TCERG1LQ5VWI1 586 aa15.71■□□□□ 0.11
CLIP2-203ENST00000395060 SH3RF3Q8TEJ3 882 aaPredicted RBP15.71■□□□□ 0.11
CLIP2-203ENST00000395060 MINPP1Q9UNW1 487 aa15.71■□□□□ 0.11
CLIP2-203ENST00000395060 FSBPO95073 299 aa15.71■□□□□ 0.11
CLIP2-203ENST00000395060 FAM107AO95990 144 aa15.71■□□□□ 0.11
CLIP2-203ENST00000395060 PRLRP16471 622 aa15.71■□□□□ 0.11
CLIP2-203ENST00000395060 ECM1Q16610 540 aa15.71■□□□□ 0.11
CLIP2-203ENST00000395060 CCDC113Q9H0I3 377 aa15.71■□□□□ 0.11
CLIP2-203ENST00000395060 VCPKMTQ9H867 229 aa15.71■□□□□ 0.11
CLIP2-203ENST00000395060 ATP8A1Q9Y2Q0 1164 aa15.71■□□□□ 0.11
CLIP2-203ENST00000395060 NOL4O94818 638 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 CDK17Q00537 523 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 CDC37Q16543 378 aaPredicted RBP15.7■□□□□ 0.1
CLIP2-203ENST00000395060 UBE2SQ16763 222 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 USP38Q8NB14 1042 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 TRIM51Q9BSJ1 452 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 NUP98P52948 1817 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 EP400Q96L91 3159 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 GMNCA6NCL1 334 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 EIF4E1BA6NMX2 242 aaKnown RBP15.7■□□□□ 0.1
CLIP2-203ENST00000395060 M0R2N6 131 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 TTI1O43156 1089 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 SART1O43290 800 aaKnown RBP15.7■□□□□ 0.1
CLIP2-203ENST00000395060 SKAP2O75563 359 aaPredicted RBP15.7■□□□□ 0.1
CLIP2-203ENST00000395060 NF2P35240 595 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 TNNC1P63316 161 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 GRIK5Q16478 980 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 TBC1D9BQ66K14 1250 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 PNMA5Q96PV4 448 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 TSG101Q99816 390 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 SELENOSQ9BQE4 189 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 TAF1DQ9H5J8 278 aaPredicted RBP15.7■□□□□ 0.1
CLIP2-203ENST00000395060 BAIAP2L1Q9UHR4 511 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 ODF2LQ9ULJ1 636 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.7■□□□□ 0.1
CLIP2-203ENST00000395060 DUOX1Q9NRD9 1551 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 KRIT1O00522 736 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 ORC4O43929 436 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 CDC25CP30307 473 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 ZNF844Q08AG5 666 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 ASTE1Q2TB18 679 aaPredicted RBP15.7■□□□□ 0.1
CLIP2-203ENST00000395060 DCAF17Q5H9S7 520 aaPredicted RBP15.7■□□□□ 0.1
CLIP2-203ENST00000395060 FIGNQ5HY92 759 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 LRRC55Q6ZSA7 311 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 INPP4AQ96PE3 977 aaPredicted RBP15.7■□□□□ 0.1
CLIP2-203ENST00000395060 SPAG5Q96R06 1193 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 ZNF652Q9Y2D9 606 aa15.7■□□□□ 0.1
CLIP2-203ENST00000395060 GSCP56915 257 aaPredicted RBP15.69■□□□□ 0.1
CLIP2-203ENST00000395060 GJB7Q6PEY0 223 aa15.69■□□□□ 0.1
CLIP2-203ENST00000395060 TMBIM4Q9HC24 238 aa15.69■□□□□ 0.1
CLIP2-203ENST00000395060 LEMD3Q9Y2U8 911 aa15.69■□□□□ 0.1
CLIP2-203ENST00000395060 COL4A1P02462 1669 aa15.69■□□□□ 0.1
CLIP2-203ENST00000395060 SPATA31A5Q5VU36 1347 aa15.69■□□□□ 0.1
CLIP2-203ENST00000395060 SPATA31A7Q8IWB4 1347 aa15.69■□□□□ 0.1
CLIP2-203ENST00000395060 SLC9A1P19634 815 aa15.69■□□□□ 0.1
CLIP2-203ENST00000395060 HNRNPH3P31942 346 aaKnown RBP15.69■□□□□ 0.1
CLIP2-203ENST00000395060 IFNAR2P48551 515 aa15.69■□□□□ 0.1
CLIP2-203ENST00000395060 PTK2Q05397 1052 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms