RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 KRT18P05783 430 aaKnown RBP16.75■□□□□ 0.27
GPC3-202ENST00000394299 ARP10275 920 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 RPA1P27694 616 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 PTGER2P43116 358 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 CASP5P51878 434 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 MYOCDQ8IZQ8 938 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 NLGN2Q8NFZ4 835 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 PIGOQ8TEQ8 1089 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 PCMTD1Q96MG8 357 aaPredicted RBP16.75■□□□□ 0.27
GPC3-202ENST00000394299 FAM20AQ96MK3 541 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 EIF2AK1Q9BQI3 630 aaKnown RBP16.75■□□□□ 0.27
GPC3-202ENST00000394299 LRRC27Q9C0I9 530 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 DEFB129Q9H1M3 183 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 HOMER2Q9NSB8 354 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 RSPH10B2B2RC85 870 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 NFIBO00712 420 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 URI1O94763 535 aaPredicted RBP16.75■□□□□ 0.27
GPC3-202ENST00000394299 CCDC175P0C221 793 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 RSPH10BP0C881 870 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 LRRC55Q6ZSA7 311 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 SLF1Q9BQI6 1058 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 NAA15Q9BXJ9 866 aaKnown RBP16.75■□□□□ 0.27
GPC3-202ENST00000394299 COL20A1Q9P218 1284 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 TFR2Q9UP52 801 aa16.75■□□□□ 0.27
GPC3-202ENST00000394299 LUC7L2Q9Y383 392 aaKnown RBP16.75■□□□□ 0.27
GPC3-202ENST00000394299 MRPL11Q9Y3B7 192 aaKnown RBP16.75■□□□□ 0.27
GPC3-202ENST00000394299 A0A1W2PQC6 194 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 SFI1A8K8P3 1242 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 PSMD2Q13200 908 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 HAUS3Q68CZ6 603 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 MCTP2Q6DN12 878 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 WDR59Q6PJI9 974 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 OTOP1Q7RTM1 612 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 FAM160B2Q86V87 743 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 BHMT2Q9H2M3 363 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 PKD2L1Q9P0L9 805 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 CCPG1Q9ULG6 757 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 DNM3Q9UQ16 869 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 EPHB6O15197 1021 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 FECHP22830 423 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 PPP1R2P41236 205 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 GIT2Q14161 759 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 KIF4BQ2VIQ3 1234 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 FBXO41Q8TF61 875 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 SCFD1Q8WVM8 642 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 CCDC51Q96ER9 411 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 ZMYND15Q9H091 742 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 SH2D4AQ9H788 454 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 L2HGDHQ9H9P8 463 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 RAVER2Q9HCJ3 691 aaKnown RBP16.74■□□□□ 0.27
GPC3-202ENST00000394299 CAPN11Q9UMQ6 739 aa16.74■□□□□ 0.27
GPC3-202ENST00000394299 TRAF5O00463 557 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 TRIM21P19474 475 aaKnown RBP16.73■□□□□ 0.27
GPC3-202ENST00000394299 GLIPR1L2Q4G1C9 344 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 FAM114A1Q8IWE2 563 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 TPH2Q8IWU9 490 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 CCDC65Q8IXS2 484 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 OR8K1Q8NGG5 319 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 ANKRD7Q92527 254 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 ZKSCAN4Q969J2 545 aaPredicted RBP16.73■□□□□ 0.27
GPC3-202ENST00000394299 HOOK2Q96ED9 719 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 REEP2Q9BRK0 252 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 RUSC1Q9BVN2 902 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 ABCB11O95342 1321 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 ZNF541Q9H0D2 1346 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 FER1L6Q2WGJ9 1857 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 SLITRK3O94933 977 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 SLU7O95391 586 aaKnown RBP16.73■□□□□ 0.27
GPC3-202ENST00000394299 MTMR2Q13614 643 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 VWA3BQ502W6 1294 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 LRCH2Q5VUJ6 765 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 CYP26C1Q6V0L0 522 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 TMTC1Q8IUR5 882 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 SYT2Q8N9I0 419 aaPredicted RBP16.73■□□□□ 0.27
GPC3-202ENST00000394299 IL31RAQ8NI17 732 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 ERMNQ8TAM6 284 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 DYDC2Q96IM9 177 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 PURBQ96QR8 312 aaKnown RBP16.73■□□□□ 0.27
GPC3-202ENST00000394299 SGIP1Q9BQI5 828 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 TANGO6Q9C0B7 1094 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 TTYH3Q9C0H2 523 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 NDST4Q9H3R1 872 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 EMILIN3Q9NT22 766 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 PHLPP2Q6ZVD8 1323 aa16.73■□□□□ 0.27
GPC3-202ENST00000394299 DDX39AO00148 427 aaKnown RBP16.72■□□□□ 0.27
GPC3-202ENST00000394299 PLA2G6O60733 806 aa16.72■□□□□ 0.27
GPC3-202ENST00000394299 PSMD10O75832 226 aa16.72■□□□□ 0.27
GPC3-202ENST00000394299 ALAS1P13196 640 aa16.72■□□□□ 0.27
GPC3-202ENST00000394299 TRIM14Q14142 442 aa16.72■□□□□ 0.27
GPC3-202ENST00000394299 ZCWPW2Q504Y3 356 aa16.72■□□□□ 0.27
GPC3-202ENST00000394299 MUM1L1Q5H9M0 696 aa16.72■□□□□ 0.27
GPC3-202ENST00000394299 WNK4Q96J92 1243 aa16.72■□□□□ 0.27
GPC3-202ENST00000394299 WRAP73Q9P2S5 460 aaPredicted RBP16.72■□□□□ 0.27
GPC3-202ENST00000394299 REXO2Q9Y3B8 237 aaKnown RBP16.72■□□□□ 0.27
GPC3-202ENST00000394299 FZD9O00144 591 aa16.72■□□□□ 0.27
GPC3-202ENST00000394299 LRRC63Q05C16 580 aa16.72■□□□□ 0.27
GPC3-202ENST00000394299 SPP2Q13103 211 aa16.72■□□□□ 0.27
GPC3-202ENST00000394299 CEP55Q53EZ4 464 aa16.72■□□□□ 0.27
GPC3-202ENST00000394299 DLK2Q6UY11 383 aa16.72■□□□□ 0.27
GPC3-202ENST00000394299 SFR1Q86XK3 245 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms