RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 CCDC155Q8N6L0 562 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 SMCR8Q8TEV9 937 aaPredicted RBP13.61□□□□□ -0.23
RFC5-201ENST00000392542 MASTLQ96GX5 879 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 IDI2Q9BXS1 227 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 DBNDD1Q9H9R9 158 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 MLXIPQ9HAP2 919 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 RNF216Q9NWF9 866 aaPredicted RBP13.61□□□□□ -0.23
RFC5-201ENST00000392542 TBC1D7Q9P0N9 293 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 CEP72Q9P209 647 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 PI4KBQ9UBF8 816 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 SNX12Q9UMY4 172 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 ATAD5Q96QE3 1844 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 SSU72P8A0A1W2PR75 194 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 PDE2AO00408 941 aaPredicted RBP13.61□□□□□ -0.23
RFC5-201ENST00000392542 MEIS2O14770 477 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 ZNF185O15231 689 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 MED24O75448 989 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 ERCC3P19447 782 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 MAGEA1P43355 309 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 FKBP1AP62942 108 aaKnown RBP13.61□□□□□ -0.23
RFC5-201ENST00000392542 ASTE1Q2TB18 679 aaPredicted RBP13.61□□□□□ -0.23
RFC5-201ENST00000392542 MCTP2Q6DN12 878 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 IQCEQ6IPM2 695 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 CRYGNQ8WXF5 182 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 UIMC1Q96RL1 719 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 KCNQ5Q9NR82 932 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 FAM198AQ9UFP1 575 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 PCDHAC2Q9Y5I4 1007 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 NPHP3-ACAD11A0A0J9YXS1 232 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 FRMD3A2A2Y4 597 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 MOCS3O95396 460 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 STAT3P40763 770 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 HDLBPQ00341 1268 aaKnown RBP13.6□□□□□ -0.23
RFC5-201ENST00000392542 MAP9Q49MG5 647 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 HERC4Q5GLZ8 1057 aaPredicted RBP13.6□□□□□ -0.23
RFC5-201ENST00000392542 HGSNATQ68CP4 663 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 HAUS3Q68CZ6 603 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 SH3BP5LQ7L8J4 393 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 KRT27Q7Z3Y8 459 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 KIAA0825Q8IV33 1275 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 NELFCDQ8IXH7 590 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 ZC3H3Q8IXZ2 948 aaKnown RBP13.6□□□□□ -0.23
RFC5-201ENST00000392542 TXLNBQ8N3L3 684 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 SCFD1Q8WVM8 642 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 EXOC4Q96A65 974 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 TRIM34Q9BYJ4 488 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 NUCKS1Q9H1E3 243 aaKnown RBP13.6□□□□□ -0.23
RFC5-201ENST00000392542 KCTD10Q9H3F6 313 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 ACBD3Q9H3P7 528 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 PSD3Q9NYI0 1048 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 MYH10P35580 1976 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 PITPNM2Q9BZ72 1349 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 ZNF646O15015 1829 aaPredicted RBP13.6□□□□□ -0.23
RFC5-201ENST00000392542 EP400Q96L91 3159 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 LRRIQ3A6PVS8 624 aaPredicted RBP13.6□□□□□ -0.23
RFC5-201ENST00000392542 PRLRP16471 622 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 SLC12A3P55017 1021 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 ARHGAP4P98171 946 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
RFC5-201ENST00000392542 ICA1Q05084 483 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 TATDN1Q6P1N9 297 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 COL23A1Q86Y22 540 aaPredicted RBP13.6□□□□□ -0.23
RFC5-201ENST00000392542 SIAH1Q8IUQ4 282 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 TRIM59Q8IWR1 403 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 ETNPPLQ8TBG4 499 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 SYN2Q92777 582 aaPredicted RBP13.6□□□□□ -0.23
RFC5-201ENST00000392542 ALS2CR12Q96Q35 445 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 LSM14BQ9BX40 385 aaKnown RBP13.6□□□□□ -0.23
RFC5-201ENST00000392542 AMNQ9BXJ7 453 aa13.6□□□□□ -0.23
RFC5-201ENST00000392542 QTRT2Q9H974 415 aaKnown RBP13.6□□□□□ -0.23
RFC5-201ENST00000392542 TBX3O15119 743 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 NPM3O75607 178 aaKnown RBP13.59□□□□□ -0.23
RFC5-201ENST00000392542 NOL4O94818 638 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 KRT18P05783 430 aaKnown RBP13.59□□□□□ -0.23
RFC5-201ENST00000392542 SPIRE1Q08AE8 756 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 Q4G0T1 1027 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 STRIP1Q5VSL9 837 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 PPP4R3CPQ6ZMV5 832 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 TMEM179Q6ZVK1 233 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 ZNF572Q7Z3I7 529 aaPredicted RBP13.59□□□□□ -0.23
RFC5-201ENST00000392542 CREG2Q8IUH2 290 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 GPIHBP1Q8IV16 184 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 P2RX7Q99572 595 aaKnown RBP13.59□□□□□ -0.23
RFC5-201ENST00000392542 VIPAS39Q9H9C1 493 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 EMILIN3Q9NT22 766 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 ADAM21Q9UKJ8 722 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 FAM184BQ9ULE4 1060 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 SCN9AQ15858 1988 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 POTEFA5A3E0 1075 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 POTEIP0CG38 1075 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 RBM5P52756 815 aaKnown RBP eCLIP13.59□□□□□ -0.23
RFC5-201ENST00000392542 GYS2P54840 703 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 C2orf54Q08AI8 447 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 ARSHQ5FYA8 562 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 DACT2Q5SW24 774 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 FAM83BQ5T0W9 1011 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 SFMBT2Q5VUG0 894 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 POTEGQ6S5H5 508 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 POTEEQ6S8J3 1075 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 GMCL1P1Q8NEA9 526 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms