RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 SSU72P8A0A1W2PR75 194 aa15.37■□□□□ 0.05
CCDC57-203ENST00000392343 CEP104O60308 925 aa15.37■□□□□ 0.05
CCDC57-203ENST00000392343 SERPING1P05155 500 aa15.37■□□□□ 0.05
CCDC57-203ENST00000392343 PPP1R2P41236 205 aa15.37■□□□□ 0.05
CCDC57-203ENST00000392343 ODF2Q5BJF6 829 aa15.37■□□□□ 0.05
CCDC57-203ENST00000392343 REXO1Q8N1G1 1221 aaKnown RBP15.37■□□□□ 0.05
CCDC57-203ENST00000392343 INPP4AQ96PE3 977 aaPredicted RBP15.37■□□□□ 0.05
CCDC57-203ENST00000392343 NEUROG2Q9H2A3 272 aa15.37■□□□□ 0.05
CCDC57-203ENST00000392343 ZHX3Q9H4I2 956 aa15.37■□□□□ 0.05
CCDC57-203ENST00000392343 COL4A3BPQ9Y5P4 624 aa15.37■□□□□ 0.05
CCDC57-203ENST00000392343 FGFR1OPO95684 399 aaKnown RBP15.37■□□□□ 0.05
CCDC57-203ENST00000392343 GNA11P29992 359 aa15.37■□□□□ 0.05
CCDC57-203ENST00000392343 HSD17B3P37058 310 aa15.37■□□□□ 0.05
CCDC57-203ENST00000392343 SPRED3Q2MJR0 410 aa15.37■□□□□ 0.05
CCDC57-203ENST00000392343 TSG101Q99816 390 aa15.37■□□□□ 0.05
CCDC57-203ENST00000392343 LRRC4CQ9HCJ2 640 aa15.37■□□□□ 0.05
CCDC57-203ENST00000392343 SEC63Q9UGP8 760 aaKnown RBP15.37■□□□□ 0.05
CCDC57-203ENST00000392343 ATP6V0A2Q9Y487 856 aa15.37■□□□□ 0.05
CCDC57-203ENST00000392343 RASA1P20936 1047 aa15.36■□□□□ 0.05
CCDC57-203ENST00000392343 RPS8P62241 208 aaKnown RBP15.36■□□□□ 0.05
CCDC57-203ENST00000392343 CHADLQ6NUI6 762 aa15.36■□□□□ 0.05
CCDC57-203ENST00000392343 MYOCDQ8IZQ8 938 aa15.36■□□□□ 0.05
CCDC57-203ENST00000392343 USP38Q8NB14 1042 aa15.36■□□□□ 0.05
CCDC57-203ENST00000392343 RAD54LQ92698 747 aa15.36■□□□□ 0.05
CCDC57-203ENST00000392343 DDX47Q9H0S4 455 aaKnown RBP15.36■□□□□ 0.05
CCDC57-203ENST00000392343 CEP72Q9P209 647 aa15.36■□□□□ 0.05
CCDC57-203ENST00000392343 EIF6P56537 245 aaKnown RBP15.36■□□□□ 0.05
CCDC57-203ENST00000392343 LRRC63Q05C16 580 aa15.36■□□□□ 0.05
CCDC57-203ENST00000392343 SLC18A3Q16572 532 aa15.36■□□□□ 0.05
CCDC57-203ENST00000392343 QPCTQ16769 361 aa15.36■□□□□ 0.05
CCDC57-203ENST00000392343 UBLCP1Q8WVY7 318 aaPredicted RBP15.36■□□□□ 0.05
CCDC57-203ENST00000392343 TAF4BQ92750 862 aa15.36■□□□□ 0.05
CCDC57-203ENST00000392343 IQCDQ96DY2 449 aa15.36■□□□□ 0.05
CCDC57-203ENST00000392343 PVALEFA0A1B0GWK0 134 aa15.35■□□□□ 0.05
CCDC57-203ENST00000392343 GOLGA6L10A6NI86 522 aa15.35■□□□□ 0.05
CCDC57-203ENST00000392343 USP17L5A8MUK1 530 aa15.35■□□□□ 0.05
CCDC57-203ENST00000392343 DCDC2CA8MYV0 355 aa15.35■□□□□ 0.05
CCDC57-203ENST00000392343 MAP2K2P36507 400 aa15.35■□□□□ 0.05
CCDC57-203ENST00000392343 TNNI2P48788 182 aa15.35■□□□□ 0.05
CCDC57-203ENST00000392343 ACTN3Q08043 901 aaPredicted RBP15.35■□□□□ 0.05
CCDC57-203ENST00000392343 COASYQ13057 564 aa15.35■□□□□ 0.05
CCDC57-203ENST00000392343 SEMA3FQ13275 785 aa15.35■□□□□ 0.05
CCDC57-203ENST00000392343 UAP1Q16222 522 aaPredicted RBP15.35■□□□□ 0.05
CCDC57-203ENST00000392343 CCDC13Q8IYE1 715 aa15.35■□□□□ 0.05
CCDC57-203ENST00000392343 MTMR9Q96QG7 549 aa15.35■□□□□ 0.05
CCDC57-203ENST00000392343 TSKSQ9UJT2 592 aa15.35■□□□□ 0.05
CCDC57-203ENST00000392343 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.35■□□□□ 0.05
CCDC57-203ENST00000392343 TMCO5BA8MYB1 307 aa15.35■□□□□ 0.05
CCDC57-203ENST00000392343 EDIL3O43854 480 aa15.35■□□□□ 0.05
CCDC57-203ENST00000392343 FSBPO95073 299 aa15.35■□□□□ 0.05
CCDC57-203ENST00000392343 CTNNA1P35221 906 aaKnown RBP15.35■□□□□ 0.05
CCDC57-203ENST00000392343 FKBP3Q00688 224 aaKnown RBP15.35■□□□□ 0.05
CCDC57-203ENST00000392343 UBE2SQ16763 222 aa15.35■□□□□ 0.05
CCDC57-203ENST00000392343 KRT79Q5XKE5 535 aa15.35■□□□□ 0.05
CCDC57-203ENST00000392343 TAF1DQ9H5J8 278 aaPredicted RBP15.35■□□□□ 0.05
CCDC57-203ENST00000392343 TMBIM4Q9HC24 238 aa15.35■□□□□ 0.05
CCDC57-203ENST00000392343 MYH14Q7Z406 1995 aaKnown RBP15.35■□□□□ 0.05
CCDC57-203ENST00000392343 RBAK-RBAKDNI3L0D1 243 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 MARCH6O60337 910 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 ITGA4P13612 1032 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 USP8P40818 1118 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 SETQ01105 290 aaPredicted RBP15.34■□□□□ 0.05
CCDC57-203ENST00000392343 SF3B3Q15393 1217 aaKnown RBP15.34■□□□□ 0.05
CCDC57-203ENST00000392343 RPS6KA1Q15418 735 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 MICALCLQ6ZW33 695 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 WHAMMQ8TF30 809 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 CYFIP2Q96F07 1278 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 EYA3Q99504 573 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 TRIM31Q9BZY9 425 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 PANK4Q9NVE7 773 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 E9PMD0 336 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 GCOM1H8Y6P7 765 aaPredicted RBP15.34■□□□□ 0.05
CCDC57-203ENST00000392343 FAM107AO95990 144 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 LDHBP07195 334 aaKnown RBP15.34■□□□□ 0.05
CCDC57-203ENST00000392343 MYZAPP0CAP1 466 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 EPS15P42566 896 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 PTK2Q05397 1052 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 TMEM266Q2M3C6 531 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 CLEC10AQ8IUN9 316 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 ANKS1AQ92625 1134 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 RNF14Q9UBS8 474 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 HMGB1P1B2RPK0 211 aaPredicted RBP15.34■□□□□ 0.05
CCDC57-203ENST00000392343 SLC9A1P19634 815 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 ECHS1P30084 290 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 TNNC1P63316 161 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 COBLL1Q53SF7 1204 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 DHX37Q8IY37 1157 aaKnown RBP15.34■□□□□ 0.05
CCDC57-203ENST00000392343 CEP95Q96GE4 821 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 CELF4Q9BZC1 486 aaKnown RBP15.34■□□□□ 0.05
CCDC57-203ENST00000392343 CXorf56Q9H5V9 222 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 CNOT8Q9UFF9 292 aaKnown RBP15.34■□□□□ 0.05
CCDC57-203ENST00000392343 AMACRQ9UHK6 382 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 NOVA2Q9UNW9 492 aaKnown RBP15.34■□□□□ 0.05
CCDC57-203ENST00000392343 PCDHGC5Q9Y5F6 944 aa15.34■□□□□ 0.05
CCDC57-203ENST00000392343 GOLGB1Q14789 3259 aaKnown RBP15.33■□□□□ 0.04
CCDC57-203ENST00000392343 A6NNZ2 444 aa15.33■□□□□ 0.04
CCDC57-203ENST00000392343 ASIC2Q16515 512 aa15.33■□□□□ 0.04
CCDC57-203ENST00000392343 TUBB8Q3ZCM7 444 aa15.33■□□□□ 0.04
CCDC57-203ENST00000392343 TBC1D9BQ66K14 1250 aa15.33■□□□□ 0.04
CCDC57-203ENST00000392343 MREGQ8N565 214 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms