RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 GSTO1P78417 241 aa23.12■■□□□ 1.29
COL23A1-201ENST00000390654 FAM26FQ5R3K3 315 aa23.12■■□□□ 1.29
COL23A1-201ENST00000390654 PVALEFA0A1B0GWK0 134 aa23.12■■□□□ 1.29
COL23A1-201ENST00000390654 DPP8Q6V1X1 898 aaPredicted RBP23.12■■□□□ 1.29
COL23A1-201ENST00000390654 C16orf86Q6ZW13 317 aa23.12■■□□□ 1.29
COL23A1-201ENST00000390654 KCTD1Q719H9 257 aa23.12■■□□□ 1.29
COL23A1-201ENST00000390654 DDX25Q9UHL0 483 aaKnown RBP23.12■■□□□ 1.29
COL23A1-201ENST00000390654 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.12■■□□□ 1.29
COL23A1-201ENST00000390654 SNED1Q8TER0 1413 aa23.12■■□□□ 1.29
COL23A1-201ENST00000390654 FGFR1OPO95684 399 aaKnown RBP23.12■■□□□ 1.29
COL23A1-201ENST00000390654 AKR1B1P15121 316 aa23.12■■□□□ 1.29
COL23A1-201ENST00000390654 LRRC63Q05C16 580 aa23.12■■□□□ 1.29
COL23A1-201ENST00000390654 HLTFQ14527 1009 aaKnown RBP eCLIP23.12■■□□□ 1.29
COL23A1-201ENST00000390654 CFAP58Q5T655 872 aa23.12■■□□□ 1.29
COL23A1-201ENST00000390654 PPM1EQ8WY54 764 aa23.12■■□□□ 1.29
COL23A1-201ENST00000390654 STK17AQ9UEE5 414 aa23.12■■□□□ 1.29
COL23A1-201ENST00000390654 POTEB3A0JP26 581 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 POTECB2RU33 542 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 NDUFAB1O14561 156 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 EIF3HO15372 352 aaKnown RBP eCLIP23.11■■□□□ 1.29
COL23A1-201ENST00000390654 OPA1O60313 960 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 KRT18P05783 430 aaKnown RBP23.11■■□□□ 1.29
COL23A1-201ENST00000390654 HPDP32754 393 aaPredicted RBP23.11■■□□□ 1.29
COL23A1-201ENST00000390654 FKBP3Q00688 224 aaKnown RBP23.11■■□□□ 1.29
COL23A1-201ENST00000390654 KLHL30Q0D2K2 578 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 POTEBQ6S5H4 581 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 DDX42Q86XP3 938 aaKnown RBP eCLIP23.11■■□□□ 1.29
COL23A1-201ENST00000390654 ZNF287Q9HBT7 754 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 SHTN1A0MZ66 631 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 USP17L15C9J2P7 530 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 USP17L13C9JLJ4 530 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 USP17L11C9JVI0 530 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 USP17L18D6R9N7 530 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 USP17L22D6RA61 530 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 USP17L17D6RBQ6 530 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 USP17L19D6RCP7 530 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 USP17L20D6RJB6 530 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 SHOX2O60902 331 aaPredicted RBP23.11■■□□□ 1.29
COL23A1-201ENST00000390654 LDHCP07864 332 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 PPP1R2P41236 205 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 USP17L24Q0WX57 530 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 USP17L6PQ6QN14 398 aa23.11■■□□□ 1.29
COL23A1-201ENST00000390654 FBXW10Q5XX13 1052 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 MAATS1Q7Z4T9 603 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 TADA2BQ86TJ2 420 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 OR2W6PQ8NHA6 318 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 HAS1Q92839 578 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 AP1M1Q9BXS5 423 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 RAB34Q9BZG1 259 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 BCAS3Q9H6U6 928 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 PCDHA12Q9UN75 941 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 GOLGA8KD6RF30 607 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 TULP1O00294 542 aaPredicted RBP23.1■■□□□ 1.29
COL23A1-201ENST00000390654 MEIS1O00470 390 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 KCNK3O14649 394 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 PPP1R11O60927 126 aaPredicted RBP23.1■■□□□ 1.29
COL23A1-201ENST00000390654 CASKIN2Q8WXE0 1202 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 DNAJC19Q96DA6 116 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 CNTNAP4Q9C0A0 1308 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 ZNF233A6NK53 670 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 LCA5LO95447 670 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 EMBQ6PCB8 327 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 BARGINQ6ZT62 677 aa23.1■■□□□ 1.29
COL23A1-201ENST00000390654 RNPC3Q96LT9 517 aaKnown RBP23.1■■□□□ 1.29
COL23A1-201ENST00000390654 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.09■■□□□ 1.29
COL23A1-201ENST00000390654 PRLRP16471 622 aa23.09■■□□□ 1.29
COL23A1-201ENST00000390654 FXR2P51116 673 aaKnown RBP eCLIP23.09■■□□□ 1.29
COL23A1-201ENST00000390654 SEC24CP53992 1094 aa23.09■■□□□ 1.29
COL23A1-201ENST00000390654 IFT20Q8IY31 132 aa23.09■■□□□ 1.29
COL23A1-201ENST00000390654 MYH1P12882 1939 aa23.09■■□□□ 1.29
COL23A1-201ENST00000390654 IRS2Q9Y4H2 1338 aa23.09■■□□□ 1.29
COL23A1-201ENST00000390654 LAMB1P07942 1786 aa23.09■■□□□ 1.29
COL23A1-201ENST00000390654 PPP4CP60510 307 aa23.09■■□□□ 1.29
COL23A1-201ENST00000390654 SNAP25P60880 206 aa23.09■■□□□ 1.29
COL23A1-201ENST00000390654 SLC9A1P19634 815 aa23.08■■□□□ 1.29
COL23A1-201ENST00000390654 CACNB3P54284 484 aa23.08■■□□□ 1.29
COL23A1-201ENST00000390654 ADAM9Q13443 819 aa23.08■■□□□ 1.29
COL23A1-201ENST00000390654 SHROOM1Q2M3G4 852 aaPredicted RBP23.08■■□□□ 1.29
COL23A1-201ENST00000390654 GPBP1Q86WP2 473 aa23.08■■□□□ 1.29
COL23A1-201ENST00000390654 ADGRF4Q8IZF3 695 aa23.08■■□□□ 1.29
COL23A1-201ENST00000390654 SH3GL2Q99962 352 aa23.08■■□□□ 1.29
COL23A1-201ENST00000390654 USP17L10C9JJH3 530 aa23.08■■□□□ 1.29
COL23A1-201ENST00000390654 RAD51CO43502 376 aa23.08■■□□□ 1.29
COL23A1-201ENST00000390654 SERPING1P05155 500 aa23.08■■□□□ 1.29
COL23A1-201ENST00000390654 PRR5LQ6MZQ0 368 aa23.08■■□□□ 1.29
COL23A1-201ENST00000390654 KAT2BQ92831 832 aa23.08■■□□□ 1.29
COL23A1-201ENST00000390654 GGA1Q9UJY5 639 aa23.08■■□□□ 1.29
COL23A1-201ENST00000390654 ATP6V0A2Q9Y487 856 aa23.08■■□□□ 1.29
COL23A1-201ENST00000390654 TAL1P17542 331 aaPredicted RBP23.07■■□□□ 1.28
COL23A1-201ENST00000390654 CEP72Q9P209 647 aa23.07■■□□□ 1.28
COL23A1-201ENST00000390654 POLLQ9UGP5 575 aa23.07■■□□□ 1.28
COL23A1-201ENST00000390654 ROBO3Q96MS0 1386 aa23.07■■□□□ 1.28
COL23A1-201ENST00000390654 PJA2O43164 708 aa23.07■■□□□ 1.28
COL23A1-201ENST00000390654 CASP5P51878 434 aa23.07■■□□□ 1.28
COL23A1-201ENST00000390654 DOK7Q18PE1 504 aa23.07■■□□□ 1.28
COL23A1-201ENST00000390654 DCAF17Q5H9S7 520 aaPredicted RBP23.07■■□□□ 1.28
COL23A1-201ENST00000390654 TCERG1LQ5VWI1 586 aa23.07■■□□□ 1.28
COL23A1-201ENST00000390654 EFCAB13Q8IY85 973 aa23.07■■□□□ 1.28
COL23A1-201ENST00000390654 RIOX1Q9H6W3 641 aa23.07■■□□□ 1.28
COL23A1-201ENST00000390654 BACH1O14867 736 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms