RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 MFSD10Q14728 455 aa13.04□□□□□ -0.32
IGHV4-28-201ENST00000390612 GDF6Q6KF10 455 aaPredicted RBP13.04□□□□□ -0.32
IGHV4-28-201ENST00000390612 CYFIP1Q7L576 1253 aa13.04□□□□□ -0.32
IGHV4-28-201ENST00000390612 TMEM199Q8N511 208 aa13.04□□□□□ -0.32
IGHV4-28-201ENST00000390612 GIMAP8Q8ND71 665 aaPredicted RBP13.04□□□□□ -0.32
IGHV4-28-201ENST00000390612 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.04□□□□□ -0.32
IGHV4-28-201ENST00000390612 MXRA8Q9BRK3 442 aa13.04□□□□□ -0.32
IGHV4-28-201ENST00000390612 LARP6Q9BRS8 491 aaKnown RBP13.04□□□□□ -0.32
IGHV4-28-201ENST00000390612 KATNAL1Q9BW62 490 aa13.04□□□□□ -0.32
IGHV4-28-201ENST00000390612 ANO3Q9BYT9 981 aa13.04□□□□□ -0.32
IGHV4-28-201ENST00000390612 TMEM260Q9NX78 707 aa13.04□□□□□ -0.32
IGHV4-28-201ENST00000390612 GTF2IRD1Q9UHL9 959 aa13.04□□□□□ -0.32
IGHV4-28-201ENST00000390612 MEIS1O00470 390 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 PITPNM1O00562 1244 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 EDIL3O43854 480 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 LGALS2P05162 132 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 CYP3A4P08684 503 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 ZNF286BP0CG31 522 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 RBL2Q08999 1139 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 HIC1Q14526 733 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 KIAA0753Q2KHM9 967 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 MCTP2Q6DN12 878 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 NIPA1Q7RTP0 329 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 CYP2W1Q8TAV3 490 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 SLC26A6Q9BXS9 759 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 EHMT1Q9H9B1 1298 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 IL23AQ9NPF7 189 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 SH3GLB2Q9NR46 395 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 HDAC6Q9UBN7 1215 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 TPCN1Q9ULQ1 816 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 TRANK1O15050 2925 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 A0A0C4DFX4 3053 aa13.03□□□□□ -0.32
IGHV4-28-201ENST00000390612 PRUNE2Q8WUY3 3088 aa13.02□□□□□ -0.32
IGHV4-28-201ENST00000390612 EVPLQ92817 2033 aa13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 GSTTP1A0A1W2PQM5 241 aa13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 H3BRB1 525 aa13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 SORBS3O60504 671 aa13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 PFKFB2O60825 505 aa13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 PPFIA3O75145 1194 aa13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 CCL23P55773 120 aa13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 ARHGAP4P98171 946 aa13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 AKAP17AQ02040 695 aaKnown RBP13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 SCRN1Q12765 414 aa13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 MTMR1Q13613 665 aa13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 TRIM71Q2Q1W2 868 aaKnown RBP13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 C8orf34Q49A92 452 aa13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 CEP55Q53EZ4 464 aa13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 FAM47CQ5HY64 1035 aa13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 FAM109BQ6ICB4 259 aaPredicted RBP13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 FAM177A1Q8N128 213 aaPredicted RBP13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 CCDC12Q8WUD4 166 aaPredicted RBP13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 DHX38Q92620 1227 aaKnown RBP13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 PGBD1Q96JS3 809 aa13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 TUT1Q9H6E5 874 aaKnown RBP13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 C6orf50Q9HD87 102 aa13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 KCNH7Q9NS40 1196 aa13.02□□□□□ -0.33
IGHV4-28-201ENST00000390612 IGLV3-22A0A075B6J6 115 aa13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 M0R2N6 131 aa13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 ARP10275 920 aa13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 ACRP10323 421 aa13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 GNA11P29992 359 aa13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 AK2P54819 239 aa13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 SMAD3P84022 425 aaKnown RBP13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 SSRP1Q08945 709 aaKnown RBP13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 GPNMBQ14956 572 aa13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 NPY5RQ15761 445 aa13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 PTGISQ16647 500 aa13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 JAKMIP3Q5VZ66 844 aa13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 ZNF365Q70YC5 407 aa13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 REXO1Q8N1G1 1221 aaKnown RBP13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 C7orf31Q8N865 590 aa13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 HERVK_113Q902F9 699 aa13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 ALG1Q9BT22 464 aa13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 NFASCO94856 1347 aa13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 PTPRSQ13332 1948 aa13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 LOXHD1Q8IVV2 1947 aa13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 EYSQ5T1H1 3165 aa13.01□□□□□ -0.33
IGHV4-28-201ENST00000390612 FAM86B1E9PN63 330 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 NOP56O00567 594 aaKnown RBP13□□□□□ -0.33
IGHV4-28-201ENST00000390612 DEXIO95424 95 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 CTDNEP1O95476 244 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 FAM86B2P0C5J1 330 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 IQCF3P0C7M6 154 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 CIITAP33076 1130 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 ADAM17P78536 824 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 ZNF200P98182 395 aaPredicted RBP13□□□□□ -0.33
IGHV4-28-201ENST00000390612 STK3Q13188 491 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 PTK7Q13308 1070 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 ITGB3BPQ13352 177 aaPredicted RBP13□□□□□ -0.33
IGHV4-28-201ENST00000390612 BFSP2Q13515 415 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 ANKRD1Q15327 319 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 PSRC1Q6PGN9 363 aaPredicted RBP13□□□□□ -0.33
IGHV4-28-201ENST00000390612 TRAF7Q6Q0C0 670 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 TRIM22Q8IYM9 498 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 CCDC148Q8NFR7 591 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 CAGE1Q8TC20 777 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 BICD2Q8TD16 824 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 SEPT1Q8WYJ6 367 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 SCLYQ96I15 445 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 RNPC3Q96LT9 517 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms