RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 SLC1A4P43007 532 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 CCT5P48643 541 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 KCNB1Q14721 858 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 GMCL1P1Q8NEA9 526 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 BCAS4Q8TDM0 211 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 MAGEC2Q9UBF1 373 aaPredicted RBP9.89□□□□□ -0.83
GPNMB-202ENST00000381990 BIN2Q9UBW5 565 aaPredicted RBP9.89□□□□□ -0.83
GPNMB-202ENST00000381990 ATF5Q9Y2D1 282 aaPredicted RBP9.89□□□□□ -0.83
GPNMB-202ENST00000381990 BRCA1P38398 1863 aaKnown RBP9.89□□□□□ -0.83
GPNMB-202ENST00000381990 FER1L6Q2WGJ9 1857 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 USP17L10C9JJH3 530 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 ZEB2O60315 1214 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 TNFRSF8P28908 595 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 EPHB4P54760 987 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 SKOR1P84550 965 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 CXCL9Q07325 125 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 KIF5AQ12840 1032 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 FIGNQ5HY92 759 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 ADSSL1Q8N142 457 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 TBCKQ8TEA7 893 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 RIN2Q8WYP3 895 aaPredicted RBP9.89□□□□□ -0.83
GPNMB-202ENST00000381990 CAPZA3Q96KX2 299 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.89□□□□□ -0.83
GPNMB-202ENST00000381990 RIC8AQ9NPQ8 531 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 JADE2Q9NQC1 790 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 RNF216Q9NWF9 866 aaPredicted RBP9.89□□□□□ -0.83
GPNMB-202ENST00000381990 SYNPO2Q9UMS6 1093 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 ARFGEF1Q9Y6D6 1849 aa9.89□□□□□ -0.83
GPNMB-202ENST00000381990 PPP1R11O60927 126 aaPredicted RBP9.88□□□□□ -0.83
GPNMB-202ENST00000381990 SRGAP2O75044 1071 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 GH2P01242 217 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 OR52Z1P0C646 297 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 PRCPP42785 496 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 ZBED6P86452 979 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 NNTQ13423 1086 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 LETM2Q2VYF4 491 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 RPAINQ86UA6 219 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 IRF2BP1Q8IU81 584 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 SECISBP2LQ93073 1101 aaKnown RBP9.88□□□□□ -0.83
GPNMB-202ENST00000381990 GMCL1Q96IK5 515 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 DRC1Q96MC2 740 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 TTYH3Q9C0H2 523 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 BLZF1Q9H2G9 400 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 TAOK3Q9H2K8 898 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 PLEKHA4Q9H4M7 779 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 SNX12Q9UMY4 172 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 CNTNAP1P78357 1384 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 A0A1W2PQJ5 194 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 F5H6K3 240 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 PSMA7O14818 248 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 RAD21O60216 631 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 CCNT1O60563 726 aaKnown RBP9.88□□□□□ -0.83
GPNMB-202ENST00000381990 MYBL2P10244 700 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 TRIM21P19474 475 aaKnown RBP9.88□□□□□ -0.83
GPNMB-202ENST00000381990 VAV2P52735 878 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 MRPL12P52815 198 aaKnown RBP9.88□□□□□ -0.83
GPNMB-202ENST00000381990 APBA1Q02410 837 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 KLRC3Q07444 240 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 CIAPIN1Q6FI81 312 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 CUL5Q93034 780 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 RUFY1Q96T51 708 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 MTRQ99707 1265 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 TACO1Q9BSH4 297 aaKnown RBP9.88□□□□□ -0.83
GPNMB-202ENST00000381990 NHEJ1Q9H9Q4 299 aaPredicted RBP9.88□□□□□ -0.83
GPNMB-202ENST00000381990 TMEM260Q9NX78 707 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 GRIN2DO15399 1336 aa9.88□□□□□ -0.83
GPNMB-202ENST00000381990 USO1O60763 962 aaKnown RBP9.87□□□□□ -0.83
GPNMB-202ENST00000381990 TCP1P17987 556 aaKnown RBP9.87□□□□□ -0.83
GPNMB-202ENST00000381990 INPP5BP32019 993 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 PPP1R2P41236 205 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 JAG1P78504 1218 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 RRP1BQ14684 758 aaKnown RBP9.87□□□□□ -0.83
GPNMB-202ENST00000381990 FAM83AQ86UY5 434 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 FAM114A1Q8IWE2 563 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 JDP2Q8WYK2 163 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 CAVIN3Q969G5 261 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 ZBED3Q96IU2 234 aaPredicted RBP9.87□□□□□ -0.83
GPNMB-202ENST00000381990 AK8Q96MA6 479 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 CCSER1Q9C0I3 900 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 GLT8D2Q9H1C3 349 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 EXOC1Q9NV70 894 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 ANKRD65E5RJM6 399 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 TACC1O75410 805 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 NDUFB10O96000 172 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 UBA7P41226 1012 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 MMP14P50281 582 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 GSCP56915 257 aaPredicted RBP9.87□□□□□ -0.83
GPNMB-202ENST00000381990 SETQ01105 290 aaPredicted RBP9.87□□□□□ -0.83
GPNMB-202ENST00000381990 SPA17Q15506 151 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 GLE1Q53GS7 698 aaKnown RBP9.87□□□□□ -0.83
GPNMB-202ENST00000381990 YTHDF3Q7Z739 585 aaKnown RBP9.87□□□□□ -0.83
GPNMB-202ENST00000381990 CREG2Q8IUH2 290 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 CCDC155Q8N6L0 562 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 VEZTQ9HBM0 779 aa9.87□□□□□ -0.83
GPNMB-202ENST00000381990 PDE2AO00408 941 aaPredicted RBP9.86□□□□□ -0.83
GPNMB-202ENST00000381990 TBC1D12O60347 775 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 HSF2BPO75031 334 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 STAT6P42226 847 aa9.86□□□□□ -0.83
GPNMB-202ENST00000381990 CLK2P49760 499 aaKnown RBP9.86□□□□□ -0.83
GPNMB-202ENST00000381990 GNGT1P63211 74 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms