RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 THAP12O43422 761 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 IGKV5-2P06315 115 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 CACNB1Q02641 598 aaPredicted RBP16.2■□□□□ 0.18
SNPH-202ENST00000381873 BBS5Q8N3I7 341 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 SEPT10Q9P0V9 454 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 PNMA6FA0A0J9YX94 578 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 MEIS1O00470 390 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 C21orf2O43822 256 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 RASSF7Q02833 373 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 MTERF2Q49AM1 385 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 TBC1D10BQ4KMP7 808 aaPredicted RBP16.2■□□□□ 0.18
SNPH-202ENST00000381873 KAZNQ674X7 775 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 POTEDQ86YR6 584 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 PPP4R1Q8TF05 950 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 NUF2Q9BZD4 464 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 PARVGQ9HBI0 331 aa16.2■□□□□ 0.18
SNPH-202ENST00000381873 ATF2P15336 505 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 MAP7Q14244 749 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 METTL23Q86XA0 190 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 CHAMP1Q96JM3 812 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 ARHGAP23Q9P227 1491 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 EIF2AK2P19525 551 aaKnown RBP16.19■□□□□ 0.18
SNPH-202ENST00000381873 HLFQ16534 295 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 ZNF658Q5TYW1 1059 aaPredicted RBP16.19■□□□□ 0.18
SNPH-202ENST00000381873 BRIP1Q9BX63 1249 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 PLA2G12BQ9BX93 195 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 EMILIN3Q9NT22 766 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 PIM2Q9P1W9 311 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 ZNF215Q9UL58 517 aaPredicted RBP16.19■□□□□ 0.18
SNPH-202ENST00000381873 SPATA31A1Q5TZJ5 1347 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 PASKQ96RG2 1323 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 ZSCAN20P17040 1043 aaPredicted RBP16.19■□□□□ 0.18
SNPH-202ENST00000381873 OAS2P29728 719 aaKnown RBP16.19■□□□□ 0.18
SNPH-202ENST00000381873 LMNB2Q03252 620 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 TDRD7Q8NHU6 1098 aaKnown RBP16.19■□□□□ 0.18
SNPH-202ENST00000381873 SNX25Q9H3E2 840 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 CLIC2O15247 247 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 PCK1P35558 622 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 SEPT2Q15019 361 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 DPCR1Q3MIW9 517 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 NAA35Q5VZE5 725 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 SMYD4Q8IYR2 804 aaPredicted RBP16.19■□□□□ 0.18
SNPH-202ENST00000381873 PRPF31Q8WWY3 499 aaKnown RBP16.19■□□□□ 0.18
SNPH-202ENST00000381873 MAD1L1Q9Y6D9 718 aa16.19■□□□□ 0.18
SNPH-202ENST00000381873 ARHGEF37A1IGU5 675 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 GBP1P32455 592 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 RNASELQ05823 741 aaKnown RBP16.18■□□□□ 0.18
SNPH-202ENST00000381873 KIAA1841Q6NSI8 718 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 CAPN12Q6ZSI9 719 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 LRFN2Q9ULH4 789 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 GH2P01242 217 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 CCNE1P24864 410 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 RASSF2P50749 326 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 SF3A3Q12874 501 aaKnown RBP eCLIP16.18■□□□□ 0.18
SNPH-202ENST00000381873 PPP1R2P3Q6NXS1 205 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 C4orf50Q6ZRC1 276 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 MAGOHBQ96A72 148 aaKnown RBP16.18■□□□□ 0.18
SNPH-202ENST00000381873 TYW5A2RUC4 315 aaKnown RBP16.18■□□□□ 0.18
SNPH-202ENST00000381873 PSAPP07602 524 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 ARHGAP4P98171 946 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 PODNQ7Z5L7 613 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 CDKL2Q92772 493 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 ZNF653Q96CK0 615 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 PCIF1Q9H4Z3 704 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 NXF1Q9UBU9 619 aaKnown RBP16.18■□□□□ 0.18
SNPH-202ENST00000381873 MXI1P50539 228 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 ZNF341Q9BYN7 854 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 RASSF4Q9H2L5 321 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 CACYBPQ9HB71 228 aaKnown RBP16.18■□□□□ 0.18
SNPH-202ENST00000381873 PNMA3Q9UL41 463 aa16.18■□□□□ 0.18
SNPH-202ENST00000381873 SRPRBQ9Y5M8 271 aaKnown RBP16.18■□□□□ 0.18
SNPH-202ENST00000381873 EFCAB8A8MWE9 144 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 COBLO75128 1261 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 LRRN2O75325 713 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 PLA2G4BP0C869 781 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 HOXA7P31268 230 aaPredicted RBP16.17■□□□□ 0.18
SNPH-202ENST00000381873 MCAMP43121 646 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 GABPB1Q06547 395 aaPredicted RBP16.17■□□□□ 0.18
SNPH-202ENST00000381873 NECTIN1Q15223 517 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 SIRT2Q8IXJ6 389 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 CCDC13Q8IYE1 715 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 C7orf31Q8N865 590 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 BCAP29Q9UHQ4 241 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 UBE2SQ16763 222 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 TAB3Q8N5C8 712 aaPredicted RBP16.17■□□□□ 0.18
SNPH-202ENST00000381873 VCXQ9H320 206 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 MYO3BQ8WXR4 1341 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 ESYT2A0FGR8 921 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 PSMD2Q13200 908 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 NKX1-1Q15270 411 aaPredicted RBP16.17■□□□□ 0.18
SNPH-202ENST00000381873 ARL6IP4Q66PJ3 421 aaKnown RBP16.17■□□□□ 0.18
SNPH-202ENST00000381873 FAM71BQ8TC56 605 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 GPR101Q96P66 508 aaPredicted RBP16.17■□□□□ 0.18
SNPH-202ENST00000381873 MROH2AA6NES4 1674 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 MAPK4P31152 587 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 NLRP7Q8WX94 980 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 MTA3Q9BTC8 594 aa16.17■□□□□ 0.18
SNPH-202ENST00000381873 ZNF526Q8TF50 670 aaPredicted RBP16.16■□□□□ 0.18
SNPH-202ENST00000381873 KLHL14Q9P2G3 628 aa16.16■□□□□ 0.18
SNPH-202ENST00000381873 GOLGA8SH3BPF8 625 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms