RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 TTC28Q96AY4 2481 aa14.95□□□□□ -0.02
RPAIN-202ENST00000381208 ABHD14A-ACY1A0A1B0GW23 586 aa14.95□□□□□ -0.02
RPAIN-202ENST00000381208 SPATA31C2B4DYI2 1134 aa14.95□□□□□ -0.02
RPAIN-202ENST00000381208 H3BRB1 525 aa14.95□□□□□ -0.02
RPAIN-202ENST00000381208 RABGGTBP53611 331 aa14.95□□□□□ -0.02
RPAIN-202ENST00000381208 SP2Q02086 613 aa14.95□□□□□ -0.02
RPAIN-202ENST00000381208 HERC6Q8IVU3 1022 aa14.95□□□□□ -0.02
RPAIN-202ENST00000381208 CTAGE1Q96RT6 745 aa14.95□□□□□ -0.02
RPAIN-202ENST00000381208 C16orf70Q9BSU1 422 aa14.95□□□□□ -0.02
RPAIN-202ENST00000381208 TUT1Q9H6E5 874 aaKnown RBP14.95□□□□□ -0.02
RPAIN-202ENST00000381208 PSTPIP2Q9H939 334 aa14.95□□□□□ -0.02
RPAIN-202ENST00000381208 ZNF215Q9UL58 517 aaPredicted RBP14.95□□□□□ -0.02
RPAIN-202ENST00000381208 C17orf102A2RUQ5 167 aa14.94□□□□□ -0.02
RPAIN-202ENST00000381208 CAND2O75155 1236 aa14.94□□□□□ -0.02
RPAIN-202ENST00000381208 IGFBP4P22692 258 aa14.94□□□□□ -0.02
RPAIN-202ENST00000381208 MRPS9P82933 396 aaKnown RBP14.94□□□□□ -0.02
RPAIN-202ENST00000381208 TJAP1Q5JTD0 557 aa14.94□□□□□ -0.02
RPAIN-202ENST00000381208 SRBD1Q8N5C6 995 aaKnown RBP14.94□□□□□ -0.02
RPAIN-202ENST00000381208 PPP1R13LQ8WUF5 828 aa14.94□□□□□ -0.02
RPAIN-202ENST00000381208 ATXN2LQ8WWM7 1075 aaKnown RBP14.94□□□□□ -0.02
RPAIN-202ENST00000381208 PIBF1Q8WXW3 757 aa14.94□□□□□ -0.02
RPAIN-202ENST00000381208 DHX38Q92620 1227 aaKnown RBP14.94□□□□□ -0.02
RPAIN-202ENST00000381208 MYL10Q9BUA6 226 aa14.94□□□□□ -0.02
RPAIN-202ENST00000381208 EHMT1Q9H9B1 1298 aa14.94□□□□□ -0.02
RPAIN-202ENST00000381208 RBM28Q9NW13 759 aaKnown RBP14.94□□□□□ -0.02
RPAIN-202ENST00000381208 MEIS2O14770 477 aa14.93□□□□□ -0.02
RPAIN-202ENST00000381208 MAFGO15525 162 aa14.93□□□□□ -0.02
RPAIN-202ENST00000381208 GTPBP6O43824 516 aaPredicted RBP14.93□□□□□ -0.02
RPAIN-202ENST00000381208 CA3P07451 260 aa14.93□□□□□ -0.02
RPAIN-202ENST00000381208 IKBKEQ14164 716 aa14.93□□□□□ -0.02
RPAIN-202ENST00000381208 ADGRE1Q14246 886 aa14.93□□□□□ -0.02
RPAIN-202ENST00000381208 KRT32Q14532 448 aa14.93□□□□□ -0.02
RPAIN-202ENST00000381208 USP17L6PQ6QN14 398 aa14.93□□□□□ -0.02
RPAIN-202ENST00000381208 SERINC5Q86VE9 423 aa14.93□□□□□ -0.02
RPAIN-202ENST00000381208 FANCBQ8NB91 859 aa14.93□□□□□ -0.02
RPAIN-202ENST00000381208 GPRASP2Q96D09 838 aa14.93□□□□□ -0.02
RPAIN-202ENST00000381208 THEGQ9P2T0 379 aa14.93□□□□□ -0.02
RPAIN-202ENST00000381208 TANC1Q9C0D5 1861 aa14.93□□□□□ -0.02
RPAIN-202ENST00000381208 PRUNE2Q8WUY3 3088 aa14.92□□□□□ -0.02
RPAIN-202ENST00000381208 SPDYE3A6NKU9 549 aa14.92□□□□□ -0.02
RPAIN-202ENST00000381208 TLL1O43897 1013 aa14.92□□□□□ -0.02
RPAIN-202ENST00000381208 PLEKHA8P1O95397 391 aa14.92□□□□□ -0.02
RPAIN-202ENST00000381208 LGALS2P05162 132 aa14.92□□□□□ -0.02
RPAIN-202ENST00000381208 POU3F3P20264 500 aaPredicted RBP14.92□□□□□ -0.02
RPAIN-202ENST00000381208 HOXC8P31273 242 aa14.92□□□□□ -0.02
RPAIN-202ENST00000381208 WDR5P61964 334 aaKnown RBP14.92□□□□□ -0.02
RPAIN-202ENST00000381208 TRIM71Q2Q1W2 868 aaKnown RBP14.92□□□□□ -0.02
RPAIN-202ENST00000381208 TSGA10IPQ3SY00 556 aa14.92□□□□□ -0.02
RPAIN-202ENST00000381208 TMTC3Q6ZXV5 915 aa14.92□□□□□ -0.02
RPAIN-202ENST00000381208 CYFIP1Q7L576 1253 aa14.92□□□□□ -0.02
RPAIN-202ENST00000381208 USP38Q8NB14 1042 aa14.92□□□□□ -0.02
RPAIN-202ENST00000381208 ATP6V0A1Q93050 837 aa14.92□□□□□ -0.02
RPAIN-202ENST00000381208 NEK1Q96PY6 1258 aa14.92□□□□□ -0.02
RPAIN-202ENST00000381208 RSPH10B2B2RC85 870 aa14.91□□□□□ -0.02
RPAIN-202ENST00000381208 hCG_1984214I3L0E3 225 aa14.91□□□□□ -0.02
RPAIN-202ENST00000381208 NBNO60934 754 aa14.91□□□□□ -0.02
RPAIN-202ENST00000381208 LGR5O75473 907 aa14.91□□□□□ -0.02
RPAIN-202ENST00000381208 HMGB1P09429 215 aaKnown RBP14.91□□□□□ -0.02
RPAIN-202ENST00000381208 RSPH10BP0C881 870 aa14.91□□□□□ -0.02
RPAIN-202ENST00000381208 SMIM10L2AP0DMW4 78 aa14.91□□□□□ -0.02
RPAIN-202ENST00000381208 SMIM10L2BP0DMW5 78 aa14.91□□□□□ -0.02
RPAIN-202ENST00000381208 MYOGP15173 224 aa14.91□□□□□ -0.02
RPAIN-202ENST00000381208 RCAN1P53805 252 aa14.91□□□□□ -0.02
RPAIN-202ENST00000381208 GPNMBQ14956 572 aa14.91□□□□□ -0.02
RPAIN-202ENST00000381208 MICU3Q86XE3 530 aa14.91□□□□□ -0.02
RPAIN-202ENST00000381208 ZNF713Q8N859 430 aaPredicted RBP14.91□□□□□ -0.02
RPAIN-202ENST00000381208 GPKOWQ92917 476 aaPredicted RBP eCLIP14.91□□□□□ -0.02
RPAIN-202ENST00000381208 GPR20Q99678 358 aa14.91□□□□□ -0.02
RPAIN-202ENST00000381208 ZBED2Q9BTP6 218 aa14.91□□□□□ -0.02
RPAIN-202ENST00000381208 GLT8D2Q9H1C3 349 aa14.91□□□□□ -0.02
RPAIN-202ENST00000381208 RTEL1Q9NZ71 1219 aa14.91□□□□□ -0.02
RPAIN-202ENST00000381208 MYH7BA7E2Y1 1941 aa14.91□□□□□ -0.02
RPAIN-202ENST00000381208 TRIP12Q14669 1992 aaPredicted RBP14.91□□□□□ -0.02
RPAIN-202ENST00000381208 TET1Q8NFU7 2136 aa14.91□□□□□ -0.02
RPAIN-202ENST00000381208 EYSQ5T1H1 3165 aa14.9□□□□□ -0.02
RPAIN-202ENST00000381208 SORBS3O60504 671 aa14.9□□□□□ -0.02
RPAIN-202ENST00000381208 CDC45O75419 566 aa14.9□□□□□ -0.02
RPAIN-202ENST00000381208 SEMA3FQ13275 785 aa14.9□□□□□ -0.02
RPAIN-202ENST00000381208 ZNF618Q5T7W0 954 aa14.9□□□□□ -0.02
RPAIN-202ENST00000381208 PPP1R18Q6NYC8 613 aa14.9□□□□□ -0.02
RPAIN-202ENST00000381208 DHX32Q7L7V1 743 aaKnown RBP14.9□□□□□ -0.02
RPAIN-202ENST00000381208 PPM1EQ8WY54 764 aa14.9□□□□□ -0.02
RPAIN-202ENST00000381208 ZFP91Q96JP5 570 aaPredicted RBP14.9□□□□□ -0.02
RPAIN-202ENST00000381208 RAD9AQ99638 391 aa14.9□□□□□ -0.02
RPAIN-202ENST00000381208 NRCAMQ92823 1304 aa14.9□□□□□ -0.02
RPAIN-202ENST00000381208 SCN5AQ14524 2016 aa14.9□□□□□ -0.02
RPAIN-202ENST00000381208 CHD9Q3L8U1 2897 aa14.9□□□□□ -0.02
RPAIN-202ENST00000381208 GJB5O95377 273 aa14.89□□□□□ -0.03
RPAIN-202ENST00000381208 FOSP01100 380 aaPredicted RBP14.89□□□□□ -0.03
RPAIN-202ENST00000381208 RPLP2P05387 115 aaKnown RBP14.89□□□□□ -0.03
RPAIN-202ENST00000381208 RXRAP19793 462 aa14.89□□□□□ -0.03
RPAIN-202ENST00000381208 THPOP40225 353 aa14.89□□□□□ -0.03
RPAIN-202ENST00000381208 MRPS5P82675 430 aaKnown RBP14.89□□□□□ -0.03
RPAIN-202ENST00000381208 ZNF200P98182 395 aaPredicted RBP14.89□□□□□ -0.03
RPAIN-202ENST00000381208 TAP1Q03518 808 aa14.89□□□□□ -0.03
RPAIN-202ENST00000381208 AAK1Q2M2I8 961 aa14.89□□□□□ -0.03
RPAIN-202ENST00000381208 TRAF7Q6Q0C0 670 aa14.89□□□□□ -0.03
RPAIN-202ENST00000381208 APOA5Q6Q788 366 aa14.89□□□□□ -0.03
RPAIN-202ENST00000381208 IL27Q8NEV9 243 aa14.89□□□□□ -0.03
RPAIN-202ENST00000381208 TNPO1Q92973 898 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms