RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 FBXO11Q86XK2 927 aa14□□□□□ -0.17
PUDP-201ENST00000381077 TRIM59Q8IWR1 403 aa14□□□□□ -0.17
PUDP-201ENST00000381077 IFIH1Q9BYX4 1025 aaKnown RBP14□□□□□ -0.17
PUDP-201ENST00000381077 PSD3Q9NYI0 1048 aa14□□□□□ -0.17
PUDP-201ENST00000381077 ARHGAP20Q9P2F6 1191 aa14□□□□□ -0.17
PUDP-201ENST00000381077 RNF14Q9UBS8 474 aa14□□□□□ -0.17
PUDP-201ENST00000381077 KIAA1024Q9UPX6 916 aa14□□□□□ -0.17
PUDP-201ENST00000381077 PCDHA13Q9Y5I0 950 aa14□□□□□ -0.17
PUDP-201ENST00000381077 SPDYE3A6NKU9 549 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 TCP1P17987 556 aaKnown RBP13.99□□□□□ -0.17
PUDP-201ENST00000381077 ANXA13P27216 316 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 HSPA1LP34931 641 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 KLK7P49862 253 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 SPIRE1Q08AE8 756 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 ASTE1Q2TB18 679 aaPredicted RBP13.99□□□□□ -0.17
PUDP-201ENST00000381077 SLC9C1Q4G0N8 1177 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 SYDE2Q5VT97 1194 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 CCDC70Q6NSX1 233 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 C2CD5Q86YS7 1000 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 SYT2Q8N9I0 419 aaPredicted RBP13.99□□□□□ -0.17
PUDP-201ENST00000381077 HPS3Q969F9 1004 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 POLR3CQ9BUI4 534 aaPredicted RBP13.99□□□□□ -0.17
PUDP-201ENST00000381077 KCTD10Q9H3F6 313 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 DEF6Q9H4E7 631 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 MMRN2Q9H8L6 949 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 TRAF3IP3Q9Y228 551 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 PSME4Q14997 1843 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 DDTLA6NHG4 134 aaPredicted RBP13.99□□□□□ -0.17
PUDP-201ENST00000381077 H0YIN7 160 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 TRAF5O00463 557 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 ECE2O60344 883 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 ATP1A1P05023 1023 aaKnown RBP13.99□□□□□ -0.17
PUDP-201ENST00000381077 BMT2Q1RMZ1 405 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 CCDC40Q4G0X9 1142 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 CACNA2D4Q7Z3S7 1137 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 GPBP1Q86WP2 473 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 SIAH1Q8IUQ4 282 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 PNKPQ96T60 521 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 LACRTQ9GZZ8 138 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 EPC1Q9H2F5 836 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 EMILIN3Q9NT22 766 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 DNM3Q9UQ16 869 aa13.99□□□□□ -0.17
PUDP-201ENST00000381077 CETN3O15182 167 aa13.98□□□□□ -0.17
PUDP-201ENST00000381077 AKR1B10O60218 316 aa13.98□□□□□ -0.17
PUDP-201ENST00000381077 SERPING1P05155 500 aa13.98□□□□□ -0.17
PUDP-201ENST00000381077 BMP3P12645 472 aa13.98□□□□□ -0.17
PUDP-201ENST00000381077 C10orf76Q5T2E6 689 aa13.98□□□□□ -0.17
PUDP-201ENST00000381077 RBM26Q5T8P6 1007 aaKnown RBP13.98□□□□□ -0.17
PUDP-201ENST00000381077 FRMD5Q7Z6J6 570 aa13.98□□□□□ -0.17
PUDP-201ENST00000381077 ZSWIM4Q9H7M6 989 aa13.98□□□□□ -0.17
PUDP-201ENST00000381077 MED4Q9NPJ6 270 aa13.98□□□□□ -0.17
PUDP-201ENST00000381077 FAM207AQ9NSI2 230 aaPredicted RBP13.98□□□□□ -0.17
PUDP-201ENST00000381077 TRIM10Q9UDY6 481 aa13.98□□□□□ -0.17
PUDP-201ENST00000381077 SNX12Q9UMY4 172 aa13.98□□□□□ -0.17
PUDP-201ENST00000381077 LRRC53A6NM62 1247 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 USP17L15C9J2P7 530 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 USP17L13C9JLJ4 530 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 USP17L11C9JVI0 530 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 USP17L18D6R9N7 530 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 USP17L22D6RA61 530 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 USP17L17D6RBQ6 530 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 USP17L19D6RCP7 530 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 USP17L20D6RJB6 530 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 PLA2G6O60733 806 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 NDUFB10O96000 172 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 OAS2P29728 719 aaKnown RBP13.97□□□□□ -0.17
PUDP-201ENST00000381077 CYP2C19P33261 490 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 USP17L24Q0WX57 530 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 HERC4Q5GLZ8 1057 aaPredicted RBP13.97□□□□□ -0.17
PUDP-201ENST00000381077 USP17L6PQ6QN14 398 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 SH3BP5LQ7L8J4 393 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 ZFPM1Q8IX07 1006 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 DBNDD1Q9H9R9 158 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 PLCB1Q9NQ66 1216 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 FBXL5Q9UKA1 691 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.97□□□□□ -0.17
PUDP-201ENST00000381077 SCN9AQ15858 1988 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 KIF13BQ9NQT8 1826 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 POTEB3A0JP26 581 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 RCCD1A6NED2 376 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 POTECB2RU33 542 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 PDXKO00764 312 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 ZNF263O14978 683 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 VSNL1P62760 191 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 KCNMA1Q12791 1236 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 SLC15A2Q16348 729 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 NFIL3Q16649 462 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 NCAPH2Q6IBW4 605 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 POTEBQ6S5H4 581 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 RRAGAQ7L523 313 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 KIAA0825Q8IV33 1275 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 MMGT1Q8N4V1 131 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 SCFD1Q8WVM8 642 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 EXOC4Q96A65 974 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 LENG9Q96B70 501 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 METTL14Q9HCE5 456 aaKnown RBP13.97□□□□□ -0.17
PUDP-201ENST00000381077 AIPL1Q9NZN9 384 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 DAAM1Q9Y4D1 1078 aa13.97□□□□□ -0.17
PUDP-201ENST00000381077 E9PMD0 336 aa13.96□□□□□ -0.17
PUDP-201ENST00000381077 SLC16A3O15427 465 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms