RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 FGAP02671 866 aa20.26■□□□□ 0.83
HMGN1-203ENST00000380748 HOXC8P31273 242 aa20.26■□□□□ 0.83
HMGN1-203ENST00000380748 BMPR1AP36894 532 aa20.26■□□□□ 0.83
HMGN1-203ENST00000380748 HAND2P61296 217 aa20.26■□□□□ 0.83
HMGN1-203ENST00000380748 CELF3Q5SZQ8 465 aaKnown RBP20.26■□□□□ 0.83
HMGN1-203ENST00000380748 ADGRF4Q8IZF3 695 aa20.26■□□□□ 0.83
HMGN1-203ENST00000380748 MIER1Q8N108 512 aa20.26■□□□□ 0.83
HMGN1-203ENST00000380748 C11orf84Q9BUA3 381 aaPredicted RBP20.26■□□□□ 0.83
HMGN1-203ENST00000380748 LMAN2LQ9H0V9 348 aa20.26■□□□□ 0.83
HMGN1-203ENST00000380748 FAM86C1Q9NVL1 165 aa20.26■□□□□ 0.83
HMGN1-203ENST00000380748 CD207Q9UJ71 328 aa20.26■□□□□ 0.83
HMGN1-203ENST00000380748 KMT2EQ8IZD2 1858 aa20.26■□□□□ 0.83
HMGN1-203ENST00000380748 SMIM10L2AP0DMW4 78 aa20.25■□□□□ 0.83
HMGN1-203ENST00000380748 SMIM10L2BP0DMW5 78 aa20.25■□□□□ 0.83
HMGN1-203ENST00000380748 QRICH1Q2TAL8 776 aa20.25■□□□□ 0.83
HMGN1-203ENST00000380748 MYH6P13533 1939 aa20.24■□□□□ 0.83
HMGN1-203ENST00000380748 CFBP00751 764 aa20.24■□□□□ 0.83
HMGN1-203ENST00000380748 RB1P06400 928 aa20.24■□□□□ 0.83
HMGN1-203ENST00000380748 SP2Q02086 613 aa20.24■□□□□ 0.83
HMGN1-203ENST00000380748 SUGP1Q8IWZ8 645 aaKnown RBP20.24■□□□□ 0.83
HMGN1-203ENST00000380748 ZKSCAN3Q9BRR0 538 aa20.24■□□□□ 0.83
HMGN1-203ENST00000380748 ALG13Q9NP73 1137 aaKnown RBP20.24■□□□□ 0.83
HMGN1-203ENST00000380748 MYO15AQ9UKN7 3530 aa20.24■□□□□ 0.83
HMGN1-203ENST00000380748 H3BRB1 525 aa20.23■□□□□ 0.83
HMGN1-203ENST00000380748 OPLAHO14841 1288 aa20.23■□□□□ 0.83
HMGN1-203ENST00000380748 GFRA3O60609 400 aa20.23■□□□□ 0.83
HMGN1-203ENST00000380748 CAND2O75155 1236 aa20.23■□□□□ 0.83
HMGN1-203ENST00000380748 HSPD1P10809 573 aaKnown RBP20.23■□□□□ 0.83
HMGN1-203ENST00000380748 MYCLP12524 364 aaPredicted RBP20.23■□□□□ 0.83
HMGN1-203ENST00000380748 UBA1P22314 1058 aaKnown RBP20.23■□□□□ 0.83
HMGN1-203ENST00000380748 ADAM15Q13444 863 aa20.23■□□□□ 0.83
HMGN1-203ENST00000380748 TBC1D10CQ8IV04 446 aa20.23■□□□□ 0.83
HMGN1-203ENST00000380748 APBB2Q92870 758 aa20.23■□□□□ 0.83
HMGN1-203ENST00000380748 GPKOWQ92917 476 aaPredicted RBP eCLIP20.23■□□□□ 0.832e-6■■■■□ 20.4
HMGN1-203ENST00000380748 PRRX2Q99811 253 aa20.23■□□□□ 0.83
HMGN1-203ENST00000380748 RNPEPQ9H4A4 650 aa20.23■□□□□ 0.83
HMGN1-203ENST00000380748 TUT1Q9H6E5 874 aaKnown RBP20.23■□□□□ 0.83
HMGN1-203ENST00000380748 RC3H2Q9HBD1 1191 aaKnown RBP20.23■□□□□ 0.83
HMGN1-203ENST00000380748 MRPL11Q9Y3B7 192 aaKnown RBP20.23■□□□□ 0.83
HMGN1-203ENST00000380748 ADGRA3Q8IWK6 1321 aa20.23■□□□□ 0.83
HMGN1-203ENST00000380748 ZXDAP98168 799 aa20.22■□□□□ 0.83
HMGN1-203ENST00000380748 IL31RAQ8NI17 732 aa20.22■□□□□ 0.83
HMGN1-203ENST00000380748 MSLNLQ96KJ4 702 aa20.22■□□□□ 0.83
HMGN1-203ENST00000380748 PDCD2LQ9BRP1 358 aa20.22■□□□□ 0.83
HMGN1-203ENST00000380748 RWDD3Q9Y3V2 267 aa20.22■□□□□ 0.83
HMGN1-203ENST00000380748 EYA4O95677 639 aa20.21■□□□□ 0.83
HMGN1-203ENST00000380748 MMP1P03956 469 aa20.21■□□□□ 0.83
HMGN1-203ENST00000380748 LGALS2P05162 132 aa20.21■□□□□ 0.83
HMGN1-203ENST00000380748 MX1P20591 662 aa20.21■□□□□ 0.83
HMGN1-203ENST00000380748 NDUFV1P49821 464 aa20.21■□□□□ 0.83
HMGN1-203ENST00000380748 HSD17B4P51659 736 aa20.21■□□□□ 0.83
HMGN1-203ENST00000380748 CAMK1Q14012 370 aa20.21■□□□□ 0.83
HMGN1-203ENST00000380748 PKN1Q16512 942 aa20.21■□□□□ 0.83
HMGN1-203ENST00000380748 MFSD6Q6ZSS7 791 aa20.21■□□□□ 0.83
HMGN1-203ENST00000380748 FBXL6Q8N531 539 aa20.21■□□□□ 0.83
HMGN1-203ENST00000380748 PNMA1Q8ND90 353 aa20.21■□□□□ 0.83
HMGN1-203ENST00000380748 CLP1Q92989 425 aaKnown RBP20.21■□□□□ 0.83
HMGN1-203ENST00000380748 ZFP91Q96JP5 570 aaPredicted RBP20.21■□□□□ 0.83
HMGN1-203ENST00000380748 FAM227BQ96M60 508 aa20.21■□□□□ 0.83
HMGN1-203ENST00000380748 BCAS3Q9H6U6 928 aa20.21■□□□□ 0.83
HMGN1-203ENST00000380748 HELLSQ9NRZ9 838 aa20.21■□□□□ 0.83
HMGN1-203ENST00000380748 NEDD4P46934 1319 aa20.21■□□□□ 0.83
HMGN1-203ENST00000380748 A0A0D9SFI3 127 aa20.2■□□□□ 0.82
HMGN1-203ENST00000380748 LOC730098B7Z3J9 87 aa20.2■□□□□ 0.82
HMGN1-203ENST00000380748 DHX16O60231 1041 aaKnown RBP20.2■□□□□ 0.82
HMGN1-203ENST00000380748 VCPP55072 806 aaKnown RBP20.2■□□□□ 0.82
HMGN1-203ENST00000380748 KCNV1Q6PIU1 500 aa20.2■□□□□ 0.82
HMGN1-203ENST00000380748 JMJD4Q9H9V9 463 aa20.2■□□□□ 0.82
HMGN1-203ENST00000380748 MLXIPQ9HAP2 919 aa20.2■□□□□ 0.82
HMGN1-203ENST00000380748 VAT1LQ9HCJ6 419 aa20.2■□□□□ 0.82
HMGN1-203ENST00000380748 SETD4Q9NVD3 440 aa20.2■□□□□ 0.82
HMGN1-203ENST00000380748 CLEC1BQ9P126 229 aa20.2■□□□□ 0.82
HMGN1-203ENST00000380748 CCDC171Q6TFL3 1326 aa20.2■□□□□ 0.82
HMGN1-203ENST00000380748 RRP1P56182 461 aaKnown RBP20.19■□□□□ 0.82
HMGN1-203ENST00000380748 FAM26DQ5JW98 314 aa20.19■□□□□ 0.82
HMGN1-203ENST00000380748 ADGRD2Q7Z7M1 963 aa20.19■□□□□ 0.82
HMGN1-203ENST00000380748 ZNF589Q86UQ0 364 aaPredicted RBP20.19■□□□□ 0.82
HMGN1-203ENST00000380748 VSIG10LQ86VR7 867 aa20.19■□□□□ 0.82
HMGN1-203ENST00000380748 DGKHQ86XP1 1220 aa20.19■□□□□ 0.82
HMGN1-203ENST00000380748 SMRP1Q8NCR6 262 aa20.19■□□□□ 0.82
HMGN1-203ENST00000380748 SUPT16HQ9Y5B9 1047 aaKnown RBP20.19■□□□□ 0.82
HMGN1-203ENST00000380748 ZMYM6O95789 1325 aa20.19■□□□□ 0.82
HMGN1-203ENST00000380748 PTPRZ1P23471 2315 aaPredicted RBP20.19■□□□□ 0.82
HMGN1-203ENST00000380748 GHRP10912 638 aa20.18■□□□□ 0.82
HMGN1-203ENST00000380748 DNAJB1P25685 340 aa20.18■□□□□ 0.82
HMGN1-203ENST00000380748 GHRHRQ02643 423 aa20.18■□□□□ 0.82
HMGN1-203ENST00000380748 BTG3Q14201 252 aaPredicted RBP20.18■□□□□ 0.82
HMGN1-203ENST00000380748 PGM5Q15124 567 aa20.18■□□□□ 0.82
HMGN1-203ENST00000380748 ASPRV1Q53RT3 343 aa20.18■□□□□ 0.82
HMGN1-203ENST00000380748 TRIM50Q86XT4 487 aa20.18■□□□□ 0.82
HMGN1-203ENST00000380748 PLAGL2Q9UPG8 496 aa20.18■□□□□ 0.82
HMGN1-203ENST00000380748 SALL3Q9BXA9 1300 aa20.18■□□□□ 0.82
HMGN1-203ENST00000380748 CHRNA1P02708 482 aa20.17■□□□□ 0.82
HMGN1-203ENST00000380748 TGFB3P10600 412 aa20.17■□□□□ 0.82
HMGN1-203ENST00000380748 PCP11498 1178 aaKnown RBP20.17■□□□□ 0.82
HMGN1-203ENST00000380748 HOXA13P31271 388 aaPredicted RBP20.17■□□□□ 0.82
HMGN1-203ENST00000380748 CBX2Q14781 532 aaPredicted RBP20.17■□□□□ 0.82
HMGN1-203ENST00000380748 MCMDC2Q4G0Z9 681 aa20.17■□□□□ 0.82
HMGN1-203ENST00000380748 STOX1Q6ZVD7 989 aa20.17■□□□□ 0.82
HMGN1-203ENST00000380748 ESR2Q92731 530 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms