RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 GRIPAP1Q4V328 841 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 USP17L6PQ6QN14 398 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 CREG2Q8IUH2 290 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 FAM133AQ8N9E0 248 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 KRT12Q99456 494 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 HYOU1Q9Y4L1 999 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 LMTK3Q96Q04 1460 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 A0A1B0GUA9 196 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 TMCO5BA8MYB1 307 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 OPLAHO14841 1288 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 FAM153BP0C7A2 387 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 CDC25CP30307 473 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 CARSP49589 748 aaKnown RBP13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 GNAQP50148 359 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 SMTNP53814 917 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 AMPD3Q01432 767 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 GRB10Q13322 594 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 SF3B3Q15393 1217 aaKnown RBP13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 SNCBQ16143 134 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 SPRED3Q2MJR0 410 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 NBPF20Q3BBV1 942 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 FAM153CQ494X1 144 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 MFSD14BQ5SR56 506 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 CNNM4Q6P4Q7 775 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 TBC1D31Q96DN5 1066 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 LSM14BQ9BX40 385 aaKnown RBP13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 FAM153AQ9UHL3 310 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 SNX12Q9UMY4 172 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 NID2Q14112 1375 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 A0A1W2PQC6 194 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 RTN2O75298 545 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 MCM3P25205 808 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 LLGL1Q15334 1064 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 ECM1Q16610 540 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 HERC4Q5GLZ8 1057 aaPredicted RBP13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 PAPD7Q5XG87 772 aaKnown RBP13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 DPP8Q6V1X1 898 aaPredicted RBP13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 ZNF483Q8TF39 744 aaPredicted RBP13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 TRIM31Q9BZY9 425 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 CCSER1Q9C0I3 900 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 HAUS2Q9NVX0 235 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 MYH3P11055 1940 aa13.7□□□□□ -0.22
PRPF40B-202ENST00000380281 GNA11P29992 359 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 MRPL12P52815 198 aaKnown RBP13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 IKQ13123 557 aaPredicted RBP13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 SHROOM1Q2M3G4 852 aaPredicted RBP13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 KRT79Q5XKE5 535 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 MAATS1Q7Z4T9 603 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 FAM114A1Q8IWE2 563 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 PARP9Q8IXQ6 854 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 EHBP1Q8NDI1 1231 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 RNPC3Q96LT9 517 aaKnown RBP13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 ALS2CR12Q96Q35 445 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 BLOC1S4Q9NUP1 217 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 CICQ96RK0 1608 aaPredicted RBP13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 FLT1P17948 1338 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 LRP6O75581 1613 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 SFI1A8K8P3 1242 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 KIF3CO14782 793 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 EZRP15311 586 aaKnown RBP13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 LSP1P33241 339 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 IRX1P78414 480 aaPredicted RBP13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 TCP10Q12799 353 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 KRT25Q7Z3Z0 450 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 DDX42Q86XP3 938 aaKnown RBP eCLIP13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 ZNF473Q8WTR7 871 aaKnown RBP13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 CCDC43Q96MW1 224 aaKnown RBP13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 IKZF4Q9H2S9 585 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 KIAA1024Q9UPX6 916 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 ENO4A6NNW6 628 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 PALMO75781 387 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 AP1G2O75843 785 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 KCNB1Q14721 858 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 KIAA0753Q2KHM9 967 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 ACCSLQ4AC99 568 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 DCAF17Q5H9S7 520 aaPredicted RBP13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 CYB5D1Q6P9G0 228 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 TRIM58Q8NG06 486 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 OR2W6PQ8NHA6 318 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 C8orf37Q96NL8 207 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 TTYH3Q9C0H2 523 aa13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 TPX2Q9ULW0 747 aaKnown RBP13.69□□□□□ -0.22
PRPF40B-202ENST00000380281 PARP4Q9UKK3 1724 aaKnown RBP13.68□□□□□ -0.22
PRPF40B-202ENST00000380281 GOLGA8KD6RF30 607 aa13.68□□□□□ -0.22
PRPF40B-202ENST00000380281 GLI1P08151 1106 aa13.68□□□□□ -0.22
PRPF40B-202ENST00000380281 FGRP09769 529 aa13.68□□□□□ -0.22
PRPF40B-202ENST00000380281 GTF2IP78347 998 aa13.68□□□□□ -0.22
PRPF40B-202ENST00000380281 CYP4A11Q02928 519 aa13.68□□□□□ -0.22
PRPF40B-202ENST00000380281 SPDL1Q96EA4 605 aa13.68□□□□□ -0.22
PRPF40B-202ENST00000380281 PNMA5Q96PV4 448 aa13.68□□□□□ -0.22
PRPF40B-202ENST00000380281 AP1M1Q9BXS5 423 aa13.68□□□□□ -0.22
PRPF40B-202ENST00000380281 FAM184BQ9ULE4 1060 aa13.68□□□□□ -0.22
PRPF40B-202ENST00000380281 UBR2Q8IWV8 1755 aa13.68□□□□□ -0.22
PRPF40B-202ENST00000380281 PALM3A6NDB9 673 aaPredicted RBP13.68□□□□□ -0.22
PRPF40B-202ENST00000380281 FECHP22830 423 aa13.68□□□□□ -0.22
PRPF40B-202ENST00000380281 NNTQ13423 1086 aa13.68□□□□□ -0.22
PRPF40B-202ENST00000380281 TMEM266Q2M3C6 531 aa13.68□□□□□ -0.22
PRPF40B-202ENST00000380281 PARD3BQ8TEW8 1205 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms