RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 ZNF365Q70YC5 407 aa17.62■□□□□ 0.41
RAB4B-202ENST00000378307 NLRX1Q86UT6 975 aa17.62■□□□□ 0.41
RAB4B-202ENST00000378307 GPRASP2Q96D09 838 aa17.62■□□□□ 0.41
RAB4B-202ENST00000378307 ZNF274Q96GC6 653 aaPredicted RBP17.62■□□□□ 0.41
RAB4B-202ENST00000378307 RNPC3Q96LT9 517 aaKnown RBP17.62■□□□□ 0.41
RAB4B-202ENST00000378307 SENP7Q9BQF6 1050 aa17.62■□□□□ 0.41
RAB4B-202ENST00000378307 JADE2Q9NQC1 790 aa17.62■□□□□ 0.41
RAB4B-202ENST00000378307 PKD2L1Q9P0L9 805 aa17.62■□□□□ 0.41
RAB4B-202ENST00000378307 GTF2IRD1Q9UHL9 959 aa17.62■□□□□ 0.41
RAB4B-202ENST00000378307 TET1Q8NFU7 2136 aa17.62■□□□□ 0.41
RAB4B-202ENST00000378307 LGALS2P05162 132 aa17.61■□□□□ 0.41
RAB4B-202ENST00000378307 FAM109BQ6ICB4 259 aaPredicted RBP17.61■□□□□ 0.41
RAB4B-202ENST00000378307 DHX38Q92620 1227 aaKnown RBP17.61■□□□□ 0.41
RAB4B-202ENST00000378307 WNT8BQ93098 351 aa17.61■□□□□ 0.41
RAB4B-202ENST00000378307 MXRA8Q9BRK3 442 aa17.61■□□□□ 0.41
RAB4B-202ENST00000378307 RNF26Q9BY78 433 aaPredicted RBP17.61■□□□□ 0.41
RAB4B-202ENST00000378307 ZMYND12Q9H0C1 365 aa17.61■□□□□ 0.41
RAB4B-202ENST00000378307 IL23AQ9NPF7 189 aa17.61■□□□□ 0.41
RAB4B-202ENST00000378307 ESYT2A0FGR8 921 aa17.6■□□□□ 0.41
RAB4B-202ENST00000378307 ARP10275 920 aa17.6■□□□□ 0.41
RAB4B-202ENST00000378307 MTMR1Q13613 665 aa17.6■□□□□ 0.41
RAB4B-202ENST00000378307 RASIP1Q5U651 963 aa17.6■□□□□ 0.41
RAB4B-202ENST00000378307 GPR153Q6NV75 609 aa17.6■□□□□ 0.41
RAB4B-202ENST00000378307 TRIM50Q86XT4 487 aa17.6■□□□□ 0.41
RAB4B-202ENST00000378307 C7orf31Q8N865 590 aa17.6■□□□□ 0.41
RAB4B-202ENST00000378307 RASGRP4Q8TDF6 673 aa17.6■□□□□ 0.41
RAB4B-202ENST00000378307 IL17RAQ96F46 866 aa17.6■□□□□ 0.41
RAB4B-202ENST00000378307 KATNAL1Q9BW62 490 aa17.6■□□□□ 0.41
RAB4B-202ENST00000378307 CXXC1Q9P0U4 656 aaPredicted RBP17.6■□□□□ 0.41
RAB4B-202ENST00000378307 VPS54Q9P1Q0 977 aa17.6■□□□□ 0.41
RAB4B-202ENST00000378307 TPCN1Q9ULQ1 816 aa17.6■□□□□ 0.41
RAB4B-202ENST00000378307 TANC1Q9C0D5 1861 aa17.59■□□□□ 0.41
RAB4B-202ENST00000378307 GSTTP1A0A1W2PQM5 241 aa17.59■□□□□ 0.41
RAB4B-202ENST00000378307 H3BRB1 525 aa17.59■□□□□ 0.41
RAB4B-202ENST00000378307 NOP56O00567 594 aaKnown RBP17.59■□□□□ 0.41
RAB4B-202ENST00000378307 FOSP01100 380 aaPredicted RBP17.59■□□□□ 0.41
RAB4B-202ENST00000378307 IQCF3P0C7M6 154 aa17.59■□□□□ 0.41
RAB4B-202ENST00000378307 SREBF1P36956 1147 aa17.59■□□□□ 0.41
RAB4B-202ENST00000378307 ANAPC15P60006 121 aa17.59■□□□□ 0.41
RAB4B-202ENST00000378307 SCRN1Q12765 414 aa17.59■□□□□ 0.41
RAB4B-202ENST00000378307 GPNMBQ14956 572 aa17.59■□□□□ 0.41
RAB4B-202ENST00000378307 DEFB123Q8N688 67 aa17.59■□□□□ 0.41
RAB4B-202ENST00000378307 CRYGNQ8WXF5 182 aa17.59■□□□□ 0.41
RAB4B-202ENST00000378307 AIFM3Q96NN9 605 aa17.59■□□□□ 0.41
RAB4B-202ENST00000378307 TUT1Q9H6E5 874 aaKnown RBP17.59■□□□□ 0.41
RAB4B-202ENST00000378307 KCNH7Q9NS40 1196 aa17.59■□□□□ 0.41
RAB4B-202ENST00000378307 GRXCR1A8MXD5 290 aa17.58■□□□□ 0.4
RAB4B-202ENST00000378307 EDIL3O43854 480 aa17.58■□□□□ 0.4
RAB4B-202ENST00000378307 AK2P54819 239 aa17.58■□□□□ 0.4
RAB4B-202ENST00000378307 AKAP17AQ02040 695 aaKnown RBP17.58■□□□□ 0.4
RAB4B-202ENST00000378307 AP3B2Q13367 1082 aa17.58■□□□□ 0.4
RAB4B-202ENST00000378307 CEP55Q53EZ4 464 aa17.58■□□□□ 0.4
RAB4B-202ENST00000378307 UTP14CQ5TAP6 766 aaKnown RBP17.58■□□□□ 0.4
RAB4B-202ENST00000378307 CDHR1Q96JP9 859 aa17.58■□□□□ 0.4
RAB4B-202ENST00000378307 NOD1Q9Y239 953 aa17.58■□□□□ 0.4
RAB4B-202ENST00000378307 FAM86B1E9PN63 330 aa17.57■□□□□ 0.4
RAB4B-202ENST00000378307 MEIS1O00470 390 aa17.57■□□□□ 0.4
RAB4B-202ENST00000378307 PITPNM1O00562 1244 aa17.57■□□□□ 0.4
RAB4B-202ENST00000378307 FGBP02675 491 aa17.57■□□□□ 0.4
RAB4B-202ENST00000378307 FAM86B2P0C5J1 330 aa17.57■□□□□ 0.4
RAB4B-202ENST00000378307 HOXC8P31273 242 aa17.57■□□□□ 0.4
RAB4B-202ENST00000378307 SMAD3P84022 425 aaKnown RBP17.57■□□□□ 0.4
RAB4B-202ENST00000378307 ARHGAP4P98171 946 aa17.57■□□□□ 0.4
RAB4B-202ENST00000378307 SSRP1Q08945 709 aaKnown RBP17.57■□□□□ 0.4
RAB4B-202ENST00000378307 ITGB3BPQ13352 177 aaPredicted RBP17.57■□□□□ 0.4
RAB4B-202ENST00000378307 TRIM71Q2Q1W2 868 aaKnown RBP17.57■□□□□ 0.4
RAB4B-202ENST00000378307 PSRC1Q6PGN9 363 aaPredicted RBP17.57■□□□□ 0.4
RAB4B-202ENST00000378307 OTOP2Q7RTS6 562 aa17.57■□□□□ 0.4
RAB4B-202ENST00000378307 DEFB128Q7Z7B8 93 aa17.57■□□□□ 0.4
RAB4B-202ENST00000378307 TEX2Q8IWB9 1127 aa17.57■□□□□ 0.4
RAB4B-202ENST00000378307 HERVK_113Q902F9 699 aa17.57■□□□□ 0.4
RAB4B-202ENST00000378307 UIMC1Q96RL1 719 aa17.57■□□□□ 0.4
RAB4B-202ENST00000378307 GLT8D2Q9H1C3 349 aa17.57■□□□□ 0.4
RAB4B-202ENST00000378307 RNPEPQ9H4A4 650 aa17.57■□□□□ 0.4
RAB4B-202ENST00000378307 EHMT1Q9H9B1 1298 aa17.57■□□□□ 0.4
RAB4B-202ENST00000378307 C6orf50Q9HD87 102 aa17.57■□□□□ 0.4
RAB4B-202ENST00000378307 MTMR10Q9NXD2 777 aa17.57■□□□□ 0.4
RAB4B-202ENST00000378307 EYSQ5T1H1 3165 aa17.57■□□□□ 0.4
RAB4B-202ENST00000378307 MAFGO15525 162 aa17.56■□□□□ 0.4
RAB4B-202ENST00000378307 LARGE1O95461 756 aa17.56■□□□□ 0.4
RAB4B-202ENST00000378307 SMIM10L2AP0DMW4 78 aa17.56■□□□□ 0.4
RAB4B-202ENST00000378307 SMIM10L2BP0DMW5 78 aa17.56■□□□□ 0.4
RAB4B-202ENST00000378307 TCF7P36402 384 aaPredicted RBP17.56■□□□□ 0.4
RAB4B-202ENST00000378307 C8orf34Q49A92 452 aa17.56■□□□□ 0.4
RAB4B-202ENST00000378307 TRAF7Q6Q0C0 670 aa17.56■□□□□ 0.4
RAB4B-202ENST00000378307 GIMAP8Q8ND71 665 aaPredicted RBP17.56■□□□□ 0.4
RAB4B-202ENST00000378307 FAM161BQ96MY7 647 aa17.56■□□□□ 0.4
RAB4B-202ENST00000378307 PCYT2Q99447 389 aa17.56■□□□□ 0.4
RAB4B-202ENST00000378307 AGO4Q9HCK5 861 aaKnown RBP17.56■□□□□ 0.4
RAB4B-202ENST00000378307 GBF1Q92538 1859 aa17.56■□□□□ 0.4
RAB4B-202ENST00000378307 KAT6AQ92794 2004 aa17.55■□□□□ 0.4
RAB4B-202ENST00000378307 IGLV3-22A0A075B6J6 115 aa17.55■□□□□ 0.4
RAB4B-202ENST00000378307 CPLX1O14810 134 aa17.55■□□□□ 0.4
RAB4B-202ENST00000378307 PFKFB2O60825 505 aa17.55■□□□□ 0.4
RAB4B-202ENST00000378307 CTDNEP1O95476 244 aa17.55■□□□□ 0.4
RAB4B-202ENST00000378307 CYP3A4P08684 503 aa17.55■□□□□ 0.4
RAB4B-202ENST00000378307 CKBP12277 381 aa17.55■□□□□ 0.4
RAB4B-202ENST00000378307 PBX2P40425 430 aa17.55■□□□□ 0.4
RAB4B-202ENST00000378307 BFSP2Q13515 415 aa17.55■□□□□ 0.4
RAB4B-202ENST00000378307 REXO1Q8N1G1 1221 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms