RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 UBA7P41226 1012 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 ZCWPW2Q504Y3 356 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 TMEM53Q6P2H8 277 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 MGARPQ8TDB4 240 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 CCDC68Q9H2F9 335 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 IL1RAPL1Q9NZN1 696 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 RCOR1Q9UKL0 485 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 GLI2P10070 1586 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 SPDYE5A6NIY4 337 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 KLHL7Q8IXQ5 586 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 SH3GL2Q99962 352 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 Q9H521 79 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 TBC1D7Q9P0N9 293 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 PHF24Q9UPV7 400 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 LEMD3Q9Y2U8 911 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 TMEM98Q9Y2Y6 226 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 REREQ9P2R6 1566 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 TDRD12Q587J7 1177 aaKnown RBP12.76□□□□□ -0.37
NPHP4-202ENST00000378161 PATL1Q86TB9 770 aaKnown RBP12.76□□□□□ -0.37
NPHP4-202ENST00000378161 PLBD2Q8NHP8 589 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 KIFC2Q96AC6 838 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 SKA1Q96BD8 255 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 ZNF274Q96GC6 653 aaPredicted RBP12.76□□□□□ -0.37
NPHP4-202ENST00000378161 NUF2Q9BZD4 464 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 PANK4Q9NVE7 773 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 METP08581 1390 aa12.76□□□□□ -0.37
NPHP4-202ENST00000378161 CCDC169A6NNP5 214 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 ATP5DP30049 168 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 CASP14P31944 242 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 UBXN1Q04323 297 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 KIAA2013Q8IYS2 634 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 ESR2Q92731 530 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 NMD3Q96D46 503 aaKnown RBP12.75□□□□□ -0.37
NPHP4-202ENST00000378161 SEPT10Q9P0V9 454 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 PDLIM1O00151 329 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 ZCCHC18P0CG32 403 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 LMNB1P20700 586 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 EIF2B2P49770 351 aaKnown RBP12.75□□□□□ -0.37
NPHP4-202ENST00000378161 MAGOHP61326 146 aaKnown RBP12.75□□□□□ -0.37
NPHP4-202ENST00000378161 RBL2Q08999 1139 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 POLA2Q14181 598 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 MTF1Q14872 753 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 PI4K2BQ8TCG2 481 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 APPBP2Q92624 585 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 MAGOHBQ96A72 148 aaKnown RBP12.75□□□□□ -0.37
NPHP4-202ENST00000378161 EDC3Q96F86 508 aaKnown RBP12.75□□□□□ -0.37
NPHP4-202ENST00000378161 TSKSQ9UJT2 592 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 ATP6V0A2Q9Y487 856 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 ADGRB3O60242 1522 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 LRRC7Q96NW7 1537 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 A0A1B0GVG6 124 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 TBC1D12O60347 775 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 DDHD2O94830 711 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 GFAPP14136 432 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 MTIF2P46199 727 aaKnown RBP12.75□□□□□ -0.37
NPHP4-202ENST00000378161 ALDH5A1P51649 535 aaPredicted RBP12.75□□□□□ -0.37
NPHP4-202ENST00000378161 NDUFA8P51970 172 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 RRAGBQ5VZM2 374 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 COQ7Q99807 217 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 FHDC1Q9C0D6 1143 aaPredicted RBP12.75□□□□□ -0.37
NPHP4-202ENST00000378161 SLC5A4Q9NY91 659 aa12.75□□□□□ -0.37
NPHP4-202ENST00000378161 ANGEL1Q9UNK9 670 aaKnown RBP12.75□□□□□ -0.37
NPHP4-202ENST00000378161 TMEM247A6NEH6 219 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 GNAQP50148 359 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 RHBDL3P58872 404 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 RILPL1Q5EBL4 403 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 TRIM67Q6ZTA4 783 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 NLRP9Q7RTR0 991 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 TRMT44Q8IYL2 757 aaKnown RBP12.74□□□□□ -0.37
NPHP4-202ENST00000378161 SMYD1Q8NB12 490 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 TMEM87BQ96K49 555 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 KCNH3Q9ULD8 1083 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 QRICH2Q9H0J4 1663 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 TSPY2A6NKD2 308 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 NEURL1BA8MQ27 555 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 NDC80O14777 642 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 TAF5LO75529 589 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 TSPY3P0CV98 308 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 TSPY8P0CW00 308 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 EPB41P11171 864 aaKnown RBP12.74□□□□□ -0.37
NPHP4-202ENST00000378161 TMOD1P28289 359 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 IRX4P78413 519 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 TSPY1Q01534 308 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 PSMD6Q15008 389 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 OTUD7BQ6GQQ9 843 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 CCSAPQ6IQ19 270 aaPredicted RBP12.74□□□□□ -0.37
NPHP4-202ENST00000378161 ZNF570Q96NI8 536 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 ZNF287Q9HBT7 754 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 TCP11L1Q9NUJ3 509 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 IQGAP1P46940 1657 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 A0A1W2PQ27 194 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 A0A1W2PQ64 194 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 A0A1W2PQD8 194 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 LTKP29376 864 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 STX2P32856 288 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 COPS2P61201 443 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 DAB2IPQ5VWQ8 1189 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 LMBRD2Q68DH5 695 aaPredicted RBP12.74□□□□□ -0.37
NPHP4-202ENST00000378161 CCDC62Q6P9F0 684 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 CFAP61Q8NHU2 1237 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms