RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 USP50Q70EL3 339 aaPredicted RBP14.07□□□□□ -0.16
CLCN6-206ENST00000376496 LRRC8AQ8IWT6 810 aa14.07□□□□□ -0.16
CLCN6-206ENST00000376496 SLC5A5Q92911 643 aa14.07□□□□□ -0.16
CLCN6-206ENST00000376496 EHMT1Q9H9B1 1298 aa14.07□□□□□ -0.16
CLCN6-206ENST00000376496 KCNH7Q9NS40 1196 aa14.07□□□□□ -0.16
CLCN6-206ENST00000376496 TAB2Q9NYJ8 693 aa14.07□□□□□ -0.16
CLCN6-206ENST00000376496 WRAP73Q9P2S5 460 aaPredicted RBP14.07□□□□□ -0.16
CLCN6-206ENST00000376496 WDR90Q96KV7 1748 aa14.06□□□□□ -0.16
CLCN6-206ENST00000376496 MYL1P05976 194 aa14.06□□□□□ -0.16
CLCN6-206ENST00000376496 IREB2P48200 963 aaKnown RBP14.06□□□□□ -0.16
CLCN6-206ENST00000376496 ARSHQ5FYA8 562 aa14.06□□□□□ -0.16
CLCN6-206ENST00000376496 NT5C3AQ9H0P0 336 aa14.06□□□□□ -0.16
CLCN6-206ENST00000376496 VPS16Q9H269 839 aa14.06□□□□□ -0.16
CLCN6-206ENST00000376496 RPTORQ8N122 1335 aa14.06□□□□□ -0.16
CLCN6-206ENST00000376496 KDM3AQ9Y4C1 1321 aa14.06□□□□□ -0.16
CLCN6-206ENST00000376496 CYP11B2P19099 503 aa14.06□□□□□ -0.16
CLCN6-206ENST00000376496 PGM5Q15124 567 aa14.06□□□□□ -0.16
CLCN6-206ENST00000376496 ANKRD40Q6AI12 368 aa14.06□□□□□ -0.16
CLCN6-206ENST00000376496 UNC13DQ70J99 1090 aa14.06□□□□□ -0.16
CLCN6-206ENST00000376496 TRIM47Q96LD4 638 aa14.06□□□□□ -0.16
CLCN6-206ENST00000376496 SRRTQ9BXP5 876 aaKnown RBP14.06□□□□□ -0.16
CLCN6-206ENST00000376496 BHMT2Q9H2M3 363 aa14.06□□□□□ -0.16
CLCN6-206ENST00000376496 KRT18P05783 430 aaKnown RBP14.05□□□□□ -0.16
CLCN6-206ENST00000376496 RPA1P27694 616 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 ITGB3BPQ13352 177 aaPredicted RBP14.05□□□□□ -0.16
CLCN6-206ENST00000376496 TKFCQ3LXA3 575 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 ARHGEF16Q5VV41 709 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 HAUS3Q68CZ6 603 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 IRF2BP1Q8IU81 584 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 BANK1Q8NDB2 785 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 ERMNQ8TAM6 284 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 ADAMTS5Q9UNA0 930 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 TESPA1A2RU30 521 aaPredicted RBP14.05□□□□□ -0.16
CLCN6-206ENST00000376496 ATP9AO75110 1047 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 SLC12A3P55017 1021 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 COASYQ13057 564 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 MKRN3Q13064 507 aaKnown RBP14.05□□□□□ -0.16
CLCN6-206ENST00000376496 KRT31Q15323 416 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 VSTM4Q8IW00 320 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 CCDC47Q96A33 483 aaKnown RBP14.05□□□□□ -0.16
CLCN6-206ENST00000376496 DUSP9Q99956 384 aaKnown RBP14.05□□□□□ -0.16
CLCN6-206ENST00000376496 SH2D3AQ9BRG2 576 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 PAGR1Q9BTK6 254 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 SEMA6BQ9H3T3 888 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 PXMP2Q9NR77 195 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 PANK4Q9NVE7 773 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 BTBD7Q9P203 1132 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 PTPRFP10586 1907 aa14.05□□□□□ -0.16
CLCN6-206ENST00000376496 RSPH10B2B2RC85 870 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 PSMA7O14818 248 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 CBFA2T2O43439 604 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 SLITRK3O94933 977 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 RSPH10BP0C881 870 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 TTI2Q6NXR4 508 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 KIAA1524Q8TCG1 905 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 PDCD2LQ9BRP1 358 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 TELO2Q9Y4R8 837 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 SFI1A8K8P3 1242 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 KCNJ18B7U540 433 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 ZNF500O60304 480 aaPredicted RBP14.04□□□□□ -0.16
CLCN6-206ENST00000376496 FSTL1Q12841 308 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 KCNJ12Q14500 433 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 SH3D19Q5HYK7 790 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 RUSC1Q9BVN2 902 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 TEX13BQ9BXU2 312 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 A1CFQ9NQ94 594 aaKnown RBP14.04□□□□□ -0.16
CLCN6-206ENST00000376496 DNM3Q9UQ16 869 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 NF2P35240 595 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 STIM1Q13586 685 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 MTMR1Q13613 665 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 CNNM4Q6P4Q7 775 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 NELFCDQ8IXH7 590 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 ANKRD13AQ8IZ07 590 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 P2RX5Q93086 422 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 OPTNQ96CV9 577 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 HSD17B14Q9BPX1 270 aa14.04□□□□□ -0.16
CLCN6-206ENST00000376496 SKILP12757 684 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 CCZ1BP86790 482 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 CCZ1P86791 482 aaPredicted RBP14.03□□□□□ -0.16
CLCN6-206ENST00000376496 NR1I3Q14994 352 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 PCNX4Q63HM2 1172 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 CEP135Q66GS9 1140 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 CSGALNACT2Q8N6G5 542 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 RBM46Q8TBY0 533 aaKnown RBP14.03□□□□□ -0.16
CLCN6-206ENST00000376496 CPLX3Q8WVH0 158 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 TEKT3Q9BXF9 490 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 HOXC10Q9NYD6 342 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 ADD3Q9UEY8 706 aaKnown RBP14.03□□□□□ -0.16
CLCN6-206ENST00000376496 UBIAD1Q9Y5Z9 338 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 PAPPA2Q9BXP8 1791 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 A0A1B0GTH6 734 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 PVALEFA0A1B0GWK0 134 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 TMEM150BA6NC51 233 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 PES1O00541 588 aaKnown RBP14.03□□□□□ -0.16
CLCN6-206ENST00000376496 TPM3P06753 285 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 ADKP55263 362 aaKnown RBP14.03□□□□□ -0.16
CLCN6-206ENST00000376496 CNTN2Q02246 1040 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 PPP2R5CQ13362 524 aa14.03□□□□□ -0.16
CLCN6-206ENST00000376496 NOLC1Q14978 699 aaKnown RBP eCLIP14.03□□□□□ -0.16
CLCN6-206ENST00000376496 HERC4Q5GLZ8 1057 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms