RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CCDC151A5D8V7 595 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 POTECB2RU33 542 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 GUCY2CP25092 1073 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 MAGEA9P43362 315 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 MMP14P50281 582 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 TTC31Q49AM3 519 aaPredicted RBP15.5■□□□□ 0.07
MSH5-202ENST00000375740 KIAA1755Q5JYT7 1200 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 ZNF569Q5MCW4 686 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 POTEBQ6S5H4 581 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 MOXD1Q6UVY6 613 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 SLFN12Q8IYM2 578 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 RTKN2Q8IZC4 609 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 ACER1Q8TDN7 264 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 FAM151AQ8WW52 585 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 GOLGA1Q92805 767 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 PCMTD1Q96MG8 357 aaPredicted RBP15.5■□□□□ 0.07
MSH5-202ENST00000375740 GMLQ99445 158 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 NUP58Q9BVL2 599 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 BMP2KQ9NSY1 1161 aaPredicted RBP15.5■□□□□ 0.07
MSH5-202ENST00000375740 PANK4Q9NVE7 773 aa15.5■□□□□ 0.07
MSH5-202ENST00000375740 EPN1Q9Y6I3 576 aaPredicted RBP15.5■□□□□ 0.07
MSH5-202ENST00000375740 SPDYE3A6NKU9 549 aa15.49■□□□□ 0.07
MSH5-202ENST00000375740 OPLAHO14841 1288 aa15.49■□□□□ 0.07
MSH5-202ENST00000375740 PLA2G4BP0C869 781 aa15.49■□□□□ 0.07
MSH5-202ENST00000375740 COASYQ13057 564 aa15.49■□□□□ 0.07
MSH5-202ENST00000375740 TSR1Q2NL82 804 aaKnown RBP15.49■□□□□ 0.07
MSH5-202ENST00000375740 MCTP2Q6DN12 878 aa15.49■□□□□ 0.07
MSH5-202ENST00000375740 WDR59Q6PJI9 974 aa15.49■□□□□ 0.07
MSH5-202ENST00000375740 SECISBP2LQ93073 1101 aaKnown RBP15.49■□□□□ 0.07
MSH5-202ENST00000375740 TTYH3Q9C0H2 523 aa15.49■□□□□ 0.07
MSH5-202ENST00000375740 MED24O75448 989 aa15.49■□□□□ 0.07
MSH5-202ENST00000375740 FOSP01100 380 aaPredicted RBP15.49■□□□□ 0.07
MSH5-202ENST00000375740 TRIM21P19474 475 aaKnown RBP15.49■□□□□ 0.07
MSH5-202ENST00000375740 HOXA13P31271 388 aaPredicted RBP15.49■□□□□ 0.07
MSH5-202ENST00000375740 TEX2Q8IWB9 1127 aa15.49■□□□□ 0.07
MSH5-202ENST00000375740 ETNPPLQ8TBG4 499 aa15.49■□□□□ 0.07
MSH5-202ENST00000375740 HDAC9Q9UKV0 1011 aa15.49■□□□□ 0.07
MSH5-202ENST00000375740 PSME4Q14997 1843 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 NPHP3-ACAD11A0A0J9YXS1 232 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 NDUFA10O95299 355 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 ARHGAP25P42331 645 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 LRRC63Q05C16 580 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 Q4G0T1 1027 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 GRIPAP1Q4V328 841 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 OGFOD1Q8N543 542 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 RETREG2Q8NC44 543 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 ERGIC2Q96RQ1 377 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 PSMD1Q99460 953 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 ARHGEF10LQ9HCE6 1279 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 ABCB6Q9NP58 842 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 RGS17Q9UGC6 210 aaPredicted RBP15.48■□□□□ 0.07
MSH5-202ENST00000375740 FAM86B1E9PN63 330 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 FGFR1OPO95684 399 aaKnown RBP15.48■□□□□ 0.07
MSH5-202ENST00000375740 FAM86B2P0C5J1 330 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 SREBF1P36956 1147 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 VWA3BQ502W6 1294 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 FKBP15Q5T1M5 1219 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 POTEAQ6S8J7 498 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 LRRC31Q6UY01 552 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 MYOCDQ8IZQ8 938 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 TBC1D7Q9P0N9 293 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 SYNPO2Q9UMS6 1093 aa15.48■□□□□ 0.07
MSH5-202ENST00000375740 REXO2Q9Y3B8 237 aaKnown RBP15.48■□□□□ 0.07
MSH5-202ENST00000375740 CNTNAP1P78357 1384 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 CHRM1P11229 460 aaPredicted RBP15.47■□□□□ 0.07
MSH5-202ENST00000375740 DPEP1P16444 411 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 KCNA3P22001 575 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 HOXA7P31268 230 aaPredicted RBP15.47■□□□□ 0.07
MSH5-202ENST00000375740 SPIRE1Q08AE8 756 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 GPBP1Q86WP2 473 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 GOLGA6L1Q8N7Z2 621 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 LENG9Q96B70 501 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 VEZTQ9HBM0 779 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 TMX2Q9Y320 296 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 SMCHD1A6NHR9 2005 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 TBX3O15119 743 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 STAT2P52630 851 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 ZBED6P86452 979 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 CACNB1Q02641 598 aaPredicted RBP15.47■□□□□ 0.07
MSH5-202ENST00000375740 SPDYE2Q495Y8 402 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 FAM26FQ5R3K3 315 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 FAM83BQ5T0W9 1011 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 NCAPH2Q6IBW4 605 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 CATSPER3Q86XQ3 398 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 SLC35F6Q8N357 371 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 TSG101Q99816 390 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 FGFBP2Q9BYJ0 223 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 NDST4Q9H3R1 872 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 COL4A5P29400 1685 aa15.47■□□□□ 0.07
MSH5-202ENST00000375740 POTEFA5A3E0 1075 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 SLC26A4O43511 780 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 IVLP07476 585 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 POTEIP0CG38 1075 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 CYP11B2P19099 503 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 CHMP4BP1P59074 171 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 POTEGQ6S5H5 508 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 POTEEQ6S8J3 1075 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 LRRC55Q6ZSA7 311 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 CDAN1Q8IWY9 1227 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 CCDC65Q8IXS2 484 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms