RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 EXOC4Q96A65 974 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 DYNLL2Q96FJ2 89 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 CLIC6Q96NY7 704 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 PIM2Q9P1W9 311 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 SART1O43290 800 aaKnown RBP13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 ATF7P17544 494 aaPredicted RBP13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 TECP42680 631 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 KRT81Q14533 505 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 HAUS8Q9BT25 410 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 AZI2Q9H6S1 392 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 PANK4Q9NVE7 773 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 DDX25Q9UHL0 483 aaKnown RBP13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 CCDC151A5D8V7 595 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 RPSAP08865 295 aaKnown RBP13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 KRT3P12035 628 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 IFNAR2P48551 515 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 ST3GAL1Q11201 340 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 SP8Q8IXZ3 490 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 CNTNAP4Q9C0A0 1308 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 MMP1P03956 469 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 RGPD8O14715 1765 aaPredicted RBP13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 KRT26Q7Z3Y9 468 aa13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 BZW2Q9Y6E2 419 aaKnown RBP13.35□□□□□ -0.27
NPLOC4-202ENST00000374747 SPECC1L-ADORA2AF8WAN1 911 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 STAM2O75886 525 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 USP14P54578 494 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 LINC00116Q8NCU8 138 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 GSDMAQ96QA5 445 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 SPZ1Q9BXG8 430 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 MAGEF1Q9HAY2 307 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 C1orf112Q9NSG2 853 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 FAM170AA1A519 330 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 ENC1O14682 589 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 C21orf2O43822 256 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 PFDN1O60925 122 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 RASSF7Q02833 373 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 SUPT20HL1Q3ZLR7 823 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 ANKRD13CQ8N6S4 541 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 SYMPKQ92797 1274 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 FAM84BQ96KN1 310 aaPredicted RBP13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 AKAP12Q02952 1782 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 WDR46O15213 610 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 HEXIM1O94992 359 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 ARHGEF16Q5VV41 709 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 SH3RF3Q8TEJ3 882 aaPredicted RBP13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 TCP11Q8WWU5 503 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 NLRP7Q8WX94 980 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 ST7Q9NRC1 585 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 PCDHA5Q9Y5H7 936 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 E2F5Q15329 346 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 SMCR8Q8TEV9 937 aaPredicted RBP13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 CACTINQ8WUQ7 758 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 CNOT6LQ96LI5 555 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 HINFPQ9BQA5 517 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 RCOR1Q9UKL0 485 aa13.34□□□□□ -0.27
NPLOC4-202ENST00000374747 BFSP1Q12934 665 aa13.33□□□□□ -0.27
NPLOC4-202ENST00000374747 ADAM9Q13443 819 aa13.33□□□□□ -0.27
NPLOC4-202ENST00000374747 TUBGCP2Q9BSJ2 902 aa13.33□□□□□ -0.27
NPLOC4-202ENST00000374747 SLC39A2Q9NP94 309 aa13.33□□□□□ -0.27
NPLOC4-202ENST00000374747 CCPG1Q9ULG6 757 aa13.33□□□□□ -0.27
NPLOC4-202ENST00000374747 ZNF148Q9UQR1 794 aa13.33□□□□□ -0.27
NPLOC4-202ENST00000374747 BMP3P12645 472 aa13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 RCAN1P53805 252 aa13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 FAM26FQ5R3K3 315 aa13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 NAA35Q5VZE5 725 aa13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 OTUD6AQ7L8S5 288 aa13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 SDCCAG3Q96C92 435 aa13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 MEGF6O75095 1541 aa13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 ITPK1Q13572 414 aa13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 TBC1D10CQ8IV04 446 aa13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 CRAMP1Q96RY5 1269 aa13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 GINS2Q9Y248 185 aa13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 EEF1GP26641 437 aaKnown RBP13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 GPSM2P81274 684 aa13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 TOB2Q14106 344 aaPredicted RBP13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 RETREG2Q8NC44 543 aa13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 PRPF31Q8WWY3 499 aaKnown RBP13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 ZNF512BQ96KM6 892 aaPredicted RBP13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 RIOK1Q9BRS2 568 aaKnown RBP13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 EPB41L5Q9HCM4 733 aa13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 MROH7-TTC4A0A0A0MT08 1334 aa13.33□□□□□ -0.28
NPLOC4-202ENST00000374747 GCFC2P16383 781 aaKnown RBP13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 CRKP46108 304 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 LMNB2Q03252 620 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 SLFNL1Q499Z3 407 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 TRIM50Q86XT4 487 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 SCYL3Q8IZE3 742 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 ACTR5Q9H9F9 607 aaPredicted RBP13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 GDF11O95390 407 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 KLHL29Q96CT2 875 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 AK8Q96MA6 479 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 CUEDC2Q9H467 287 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 PNPLA7Q6ZV29 1317 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 GARSP41250 739 aaKnown RBP13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 EXOC3L4Q17RC7 722 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 PDZD8Q8NEN9 1154 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 DEPTORQ8TB45 409 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms