RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 MAPTP10636 758 aaKnown RBP9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 CASQ1P31415 396 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 ZNF76P36508 570 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 OAZ1P54368 228 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 EIF6P56537 245 aaKnown RBP9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 RBL2Q08999 1139 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 TBC1D8BQ0IIM8 1120 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 PPP2R5CQ13362 524 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 MEA1Q16626 185 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 VWA3BQ502W6 1294 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 MSL1Q68DK7 614 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 REXO1L1PQ8IX06 675 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 TRMT44Q8IYL2 757 aaKnown RBP9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 CEP112Q8N8E3 955 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 DDX12PQ92771 950 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 PKNOX2Q96KN3 472 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 PNMA5Q96PV4 448 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 KIAA1683Q9H0B3 1180 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 TAOK3Q9H2K8 898 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 AS3MTQ9HBK9 375 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 OLFML3Q9NRN5 406 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 TRAF3IP3Q9Y228 551 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 COL4A3BPQ9Y5P4 624 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 A0A087WWV3 80 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 MYMKA6NI61 221 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 TULP1O00294 542 aaPredicted RBP9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 PDXKO00764 312 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 EIF3DO15371 548 aaKnown RBP eCLIP9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 KRT86O43790 486 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 SLC37A4O43826 429 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 PPP1R12BO60237 982 aaPredicted RBP9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 STAM2O75886 525 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 TDP2O95551 362 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 GYPCP04921 128 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 ICAM1P05362 532 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 PLA2G4BP0C869 781 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 TRIM21P19474 475 aaKnown RBP9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 KCNA3P22001 575 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 MCM3P25205 808 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 CASP14P31944 242 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 KRT9P35527 623 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 MTIF2P46199 727 aaKnown RBP9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 STX17P56962 302 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 MAP3K9P80192 1104 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 STK4Q13043 487 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 RASA3Q14644 834 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 BMT2Q1RMZ1 405 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 ARHGAP29Q52LW3 1261 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 FAM26FQ5R3K3 315 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 C10orf76Q5T2E6 689 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 TTBK2Q6IQ55 1244 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 IRF2BP1Q8IU81 584 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 ZFPM1Q8IX07 1006 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 ZC3H3Q8IXZ2 948 aaKnown RBP9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 RDM1Q8NG50 284 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 DNAJC19Q96DA6 116 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 CALR3Q96L12 384 aaKnown RBP9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 NACC1Q96RE7 527 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 IWS1Q96ST2 819 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 DUSP9Q99956 384 aaKnown RBP9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 WDR18Q9BV38 432 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 NOC4LQ9BVI4 516 aaKnown RBP9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 MYOZ2Q9NPC6 264 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 TBC1D22BQ9NU19 505 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 PANK4Q9NVE7 773 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 TMEM260Q9NX78 707 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 FBXL5Q9UKA1 691 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 ODF2LQ9ULJ1 636 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 PLAGL2Q9UPG8 496 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 ADGRG1Q9Y653 693 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 BZW2Q9Y6E2 419 aaKnown RBP9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 SIPA1L1O43166 1804 aa9.67□□□□□ -0.86
SNRNP40-202ENST00000373720 ARFGEF1Q9Y6D6 1849 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 MYPNQ86TC9 1320 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 BAZ2BQ9UIF8 2168 aaKnown RBP9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 SSU72P8A0A1W2PR75 194 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 GTPBP10A4D1E9 387 aaKnown RBP9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 EIF3CLB5ME19 914 aaKnown RBP9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 C19orf81C9J6K1 198 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 CETN3O15182 167 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 SLC16A3O15427 465 aaKnown RBP9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 TEX33O43247 280 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 CALUO43852 315 aaPredicted RBP9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 USO1O60763 962 aaKnown RBP9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 EYA4O95677 639 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 DPEP1P16444 411 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 CDC25AP30304 524 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 SLC16A2P36021 539 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 HSD17B4P51659 736 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 ENPEPQ07075 957 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 SPIRE1Q08AE8 756 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 KIF4BQ2VIQ3 1234 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 TKFCQ3LXA3 575 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 CEP55Q53EZ4 464 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 ARSIQ5FYB1 569 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 ANKRD40Q6AI12 368 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 TRIM65Q6PJ69 517 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 FRMD5Q7Z6J6 570 aa9.66□□□□□ -0.86
SNRNP40-202ENST00000373720 APOBEC3FQ8IUX4 373 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms