RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 SETQ01105 290 aaPredicted RBP13.69□□□□□ -0.22
HDAC8-201ENST00000373554 SP4Q02446 784 aa13.69□□□□□ -0.22
HDAC8-201ENST00000373554 NBPF20Q3BBV1 942 aa13.69□□□□□ -0.22
HDAC8-201ENST00000373554 HABP4Q5JVS0 413 aaKnown RBP13.69□□□□□ -0.22
HDAC8-201ENST00000373554 NIPA1Q7RTP0 329 aa13.69□□□□□ -0.22
HDAC8-201ENST00000373554 SH3RF1Q7Z6J0 888 aa13.69□□□□□ -0.22
HDAC8-201ENST00000373554 CRYGNQ8WXF5 182 aa13.69□□□□□ -0.22
HDAC8-201ENST00000373554 ALG1Q9BT22 464 aa13.69□□□□□ -0.22
HDAC8-201ENST00000373554 PHF20Q9BVI0 1012 aa13.69□□□□□ -0.22
HDAC8-201ENST00000373554 COLQQ9Y215 455 aaPredicted RBP13.69□□□□□ -0.22
HDAC8-201ENST00000373554 DNAH12Q6ZR08 3092 aa13.69□□□□□ -0.22
HDAC8-201ENST00000373554 LTBP2Q14767 1821 aa13.69□□□□□ -0.22
HDAC8-201ENST00000373554 TRIM43BA6NCK2 446 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 B4GALT4O60513 344 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 DTNBO60941 627 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 ATP9AO75110 1047 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 CD4P01730 458 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 LGALS2P05162 132 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 SUPT20HL2P0C7V6 817 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 PTPN11Q06124 597 aaPredicted RBP13.68□□□□□ -0.22
HDAC8-201ENST00000373554 MFSD10Q14728 455 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 CCDC83Q8IWF9 413 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 CYP2W1Q8TAV3 490 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 KAT2BQ92831 832 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 TRIM43Q96BQ3 446 aaPredicted RBP13.68□□□□□ -0.22
HDAC8-201ENST00000373554 GPR20Q99678 358 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 GDF15Q99988 308 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 SDF4Q9BRK5 362 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 BCAS3Q9H6U6 928 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 JPH1Q9HDC5 661 aaPredicted RBP13.68□□□□□ -0.22
HDAC8-201ENST00000373554 TBX21Q9UL17 535 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 KCNJ14Q9UNX9 436 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 NOD1Q9Y239 953 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 SCN10AQ9Y5Y9 1956 aa13.68□□□□□ -0.22
HDAC8-201ENST00000373554 FAM86B1E9PN63 330 aa13.67□□□□□ -0.22
HDAC8-201ENST00000373554 MEIS1O00470 390 aa13.67□□□□□ -0.22
HDAC8-201ENST00000373554 JAK2O60674 1132 aa13.67□□□□□ -0.22
HDAC8-201ENST00000373554 FAM86B2P0C5J1 330 aa13.67□□□□□ -0.22
HDAC8-201ENST00000373554 FDPSP14324 419 aaKnown RBP13.67□□□□□ -0.22
HDAC8-201ENST00000373554 PSEN2P49810 448 aa13.67□□□□□ -0.22
HDAC8-201ENST00000373554 ST3GAL1Q11201 340 aa13.67□□□□□ -0.22
HDAC8-201ENST00000373554 TRIM29Q14134 588 aa13.67□□□□□ -0.22
HDAC8-201ENST00000373554 KIAA0753Q2KHM9 967 aa13.67□□□□□ -0.22
HDAC8-201ENST00000373554 KRT25Q7Z3Z0 450 aa13.67□□□□□ -0.22
HDAC8-201ENST00000373554 PLA2G4DQ86XP0 818 aa13.67□□□□□ -0.22
HDAC8-201ENST00000373554 C7orf31Q8N865 590 aa13.67□□□□□ -0.22
HDAC8-201ENST00000373554 LLPHQ9BRT6 129 aaKnown RBP13.67□□□□□ -0.22
HDAC8-201ENST00000373554 BACH2Q9BYV9 841 aa13.67□□□□□ -0.22
HDAC8-201ENST00000373554 UBE2OQ9C0C9 1292 aaKnown RBP13.67□□□□□ -0.22
HDAC8-201ENST00000373554 TRPV6Q9H1D0 765 aa13.67□□□□□ -0.22
HDAC8-201ENST00000373554 AGO4Q9HCK5 861 aaKnown RBP13.67□□□□□ -0.22
HDAC8-201ENST00000373554 BRMS1Q9HCU9 246 aa13.67□□□□□ -0.22
HDAC8-201ENST00000373554 ZNF215Q9UL58 517 aaPredicted RBP13.67□□□□□ -0.22
HDAC8-201ENST00000373554 NFASCO94856 1347 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 MYH7BA7E2Y1 1941 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 IGLV3-22A0A075B6J6 115 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 CCDC194A0A1B0GVG4 234 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 A0A1W2PPC1 479 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 H3BRB1 525 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 M0R2N6 131 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 ARP10275 920 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 BMP8BP34820 402 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 TCF7P36402 384 aaPredicted RBP13.66□□□□□ -0.22
HDAC8-201ENST00000373554 USP11P51784 963 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 NONOQ15233 471 aaKnown RBP eCLIP13.66□□□□□ -0.22
HDAC8-201ENST00000373554 NPY5RQ15761 445 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 PRR16Q569H4 304 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 SESTD1Q86VW0 696 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 TBCKQ8TEA7 893 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 PPP1R13LQ8WUF5 828 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 SEPT1Q8WYJ6 367 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 BADQ92934 168 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 C16orf70Q9BSU1 422 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 PRO3102Q9H379 93 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 HIPK3Q9H422 1215 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 TUT1Q9H6E5 874 aaKnown RBP13.66□□□□□ -0.22
HDAC8-201ENST00000373554 TRMT13Q9NUP7 481 aaKnown RBP13.66□□□□□ -0.22
HDAC8-201ENST00000373554 SLC9A2Q9UBY0 812 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 TCEAL9Q9UHQ7 104 aa13.66□□□□□ -0.22
HDAC8-201ENST00000373554 DOCK5Q9H7D0 1870 aa13.65□□□□□ -0.22
HDAC8-201ENST00000373554 HAS3O00219 553 aa13.65□□□□□ -0.22
HDAC8-201ENST00000373554 IPO5O00410 1097 aaKnown RBP13.65□□□□□ -0.22
HDAC8-201ENST00000373554 TIMP1P01033 207 aa13.65□□□□□ -0.22
HDAC8-201ENST00000373554 ITGB8P26012 769 aa13.65□□□□□ -0.22
HDAC8-201ENST00000373554 CIITAP33076 1130 aa13.65□□□□□ -0.22
HDAC8-201ENST00000373554 KRT2P35908 639 aa13.65□□□□□ -0.22
HDAC8-201ENST00000373554 MCM2P49736 904 aa13.65□□□□□ -0.22
HDAC8-201ENST00000373554 HMGN5P82970 282 aaKnown RBP13.65□□□□□ -0.22
HDAC8-201ENST00000373554 ITGB3BPQ13352 177 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-201ENST00000373554 UTP14CQ5TAP6 766 aaKnown RBP13.65□□□□□ -0.22
HDAC8-201ENST00000373554 TRIM50Q86XT4 487 aa13.65□□□□□ -0.22
HDAC8-201ENST00000373554 ZNF577Q9BSK1 485 aa13.65□□□□□ -0.22
HDAC8-201ENST00000373554 PPP1R12CQ9BZL4 782 aa13.65□□□□□ -0.22
HDAC8-201ENST00000373554 GJB4Q9NTQ9 266 aa13.65□□□□□ -0.22
HDAC8-201ENST00000373554 GTF2IRD1Q9UHL9 959 aa13.65□□□□□ -0.22
HDAC8-201ENST00000373554 FOSBP53539 338 aa13.64□□□□□ -0.23
HDAC8-201ENST00000373554 FPGSQ05932 587 aa13.64□□□□□ -0.23
HDAC8-201ENST00000373554 PTGISQ16647 500 aa13.64□□□□□ -0.23
HDAC8-201ENST00000373554 TDHQ8IZJ6 230 aa13.64□□□□□ -0.23
HDAC8-201ENST00000373554 TMEM199Q8N511 208 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms