RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 PCDHAC2Q9Y5I4 1007 aa12.32□□□□□ -0.44
RPRD1B-201ENST00000373433 PPP1R12BO60237 982 aaPredicted RBP12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 BMP15O95972 392 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 GPATCH4Q5T3I0 446 aaKnown RBP12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 TMTC3Q6ZXV5 915 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 CCDC13Q8IYE1 715 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 KIRREL3Q8IZU9 778 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 TMEM39BQ9GZU3 492 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 GOLGA6L7A0A1B0GV03 622 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 TRIM49BA6NDI0 452 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 LMNB1P20700 586 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 CLNS1AP54105 237 aaKnown RBP12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 ZNF473Q8WTR7 871 aaKnown RBP12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 DDX4Q9NQI0 724 aaKnown RBP12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 USP17L5A8MUK1 530 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 ENTPD3O75355 529 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 GUCY2FP51841 1108 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 SATB1Q01826 763 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 TMEM266Q2M3C6 531 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 ASPRV1Q53RT3 343 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 C8orf74Q6P047 294 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 CCDC121Q6ZUS5 278 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 NLGN2Q8NFZ4 835 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 ZNF384Q8TF68 577 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 RAB34Q9BZG1 259 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 FOXP1Q9H334 677 aaPredicted RBP12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 BAZ2BQ9UIF8 2168 aaKnown RBP12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 ZBTB21Q9ULJ3 1066 aa12.31□□□□□ -0.44
RPRD1B-201ENST00000373433 SPDYE2BA6NHP3 402 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 SPDYE6P0CI01 402 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 EEF2P13639 858 aaKnown RBP12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 RHBDL3P58872 404 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 EVX2Q03828 476 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 MAATS1Q7Z4T9 603 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 MIEF2Q96C03 454 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 PIGSQ96S52 555 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 MMRN2Q9H8L6 949 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 MAGEC2Q9UBF1 373 aaPredicted RBP12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 GDAQ9Y2T3 454 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 CSADQ9Y600 493 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 MYH3P11055 1940 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 NUP188Q5SRE5 1749 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 ESYT3A0FGR9 886 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 PAX7P23759 505 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 VAV2P52735 878 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 SPA17Q15506 151 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 NBPF9Q3BBW0 867 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 PRAMEF18Q5VWM3 479 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 CCDC174Q6PII3 467 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 SPATS2Q86XZ4 545 aaKnown RBP12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 STAG2Q8N3U4 1231 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 SPATA4Q8NEY3 305 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 SLC40A1Q9NP59 571 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 PRPF3O43395 683 aaKnown RBP12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 ASNSP08243 561 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 RPSAP08865 295 aaKnown RBP12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 PDHBP11177 359 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 NR1D1P20393 614 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 SUPT20HL1Q3ZLR7 823 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 KRT26Q7Z3Y9 468 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 BLIDQ8IZY5 108 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 REXO1Q8N1G1 1221 aaKnown RBP12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 CHURC1Q8WUH1 139 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 EPN3Q9H201 632 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 AGPAT5Q9NUQ2 364 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 MTMR4Q9NYA4 1195 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 TMOD4Q9NZQ9 345 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 LRWD1Q9UFC0 647 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 HERC5Q9UII4 1024 aaKnown RBP12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 MCM8Q9UJA3 840 aa12.3□□□□□ -0.44
RPRD1B-201ENST00000373433 DDTLA6NHG4 134 aaPredicted RBP12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 PAFAH1B1P43034 410 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 ADCY7P51828 1080 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 SKOR1P84550 965 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 NAA25Q14CX7 972 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 ALS2CLQ60I27 953 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 NFRKBQ6P4R8 1299 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 CCT8L2Q96SF2 557 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 VCPKMTQ9H867 229 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 NHEJ1Q9H9Q4 299 aaPredicted RBP12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 STIM2Q9P246 746 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 BIN2Q9UBW5 565 aaPredicted RBP12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 GAKO14976 1311 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 A6NNZ2 444 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 TACC1O75410 805 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 EZRP15311 586 aaKnown RBP12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 SNCBQ16143 134 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 TUBB8Q3ZCM7 444 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 TTC38Q5R3I4 469 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 WDR59Q6PJI9 974 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 MB21D1Q8N884 522 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 RASGRP4Q8TDF6 673 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 FAM151AQ8WW52 585 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 TRIM47Q96LD4 638 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 A1CFQ9NQ94 594 aaKnown RBP12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 RWDD2AQ9UIY3 292 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 PPP1R37O75864 691 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 BMP3P12645 472 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 PREPLQ4J6C6 727 aaPredicted RBP12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 EMBQ6PCB8 327 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms