RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 FTOQ9C0B1 505 aaKnown RBP eCLIP10.84□□□□□ -0.67
ITM2A-201ENST00000373298 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.84□□□□□ -0.67
ITM2A-201ENST00000373298 RNF208Q9H0X6 261 aa10.84□□□□□ -0.67
ITM2A-201ENST00000373298 PAK6Q9NQU5 681 aaPredicted RBP10.84□□□□□ -0.67
ITM2A-201ENST00000373298 MRVI1Q9Y6F6 885 aa10.84□□□□□ -0.67
ITM2A-201ENST00000373298 RBM47A0AV96 593 aaKnown RBP10.83□□□□□ -0.68
ITM2A-201ENST00000373298 RBAK-RBAKDNI3L0D1 243 aa10.83□□□□□ -0.68
ITM2A-201ENST00000373298 MEIS1O00470 390 aa10.83□□□□□ -0.68
ITM2A-201ENST00000373298 CTAGE5O15320 804 aa10.83□□□□□ -0.68
ITM2A-201ENST00000373298 STX6O43752 255 aa10.83□□□□□ -0.68
ITM2A-201ENST00000373298 PGK1P00558 417 aa10.83□□□□□ -0.68
ITM2A-201ENST00000373298 UBA1P22314 1058 aaKnown RBP10.83□□□□□ -0.68
ITM2A-201ENST00000373298 DDIT3P35638 169 aa10.83□□□□□ -0.68
ITM2A-201ENST00000373298 RESTQ13127 1097 aa10.83□□□□□ -0.68
ITM2A-201ENST00000373298 ITGB3BPQ13352 177 aaPredicted RBP10.83□□□□□ -0.68
ITM2A-201ENST00000373298 BECN1Q14457 450 aa10.83□□□□□ -0.68
ITM2A-201ENST00000373298 LETM2Q2VYF4 491 aa10.83□□□□□ -0.68
ITM2A-201ENST00000373298 FOXD4L6Q3SYB3 417 aaPredicted RBP10.83□□□□□ -0.68
ITM2A-201ENST00000373298 CEP55Q53EZ4 464 aa10.83□□□□□ -0.68
ITM2A-201ENST00000373298 PRR16Q569H4 304 aa10.83□□□□□ -0.68
ITM2A-201ENST00000373298 FOXD4L3Q6VB84 417 aaPredicted RBP10.83□□□□□ -0.68
ITM2A-201ENST00000373298 KRT25Q7Z3Z0 450 aa10.83□□□□□ -0.68
ITM2A-201ENST00000373298 TRMT44Q8IYL2 757 aaKnown RBP10.83□□□□□ -0.68
ITM2A-201ENST00000373298 FAM177A1Q8N128 213 aaPredicted RBP10.83□□□□□ -0.68
ITM2A-201ENST00000373298 ABHD8Q96I13 439 aa10.83□□□□□ -0.68
ITM2A-201ENST00000373298 MXRA8Q9BRK3 442 aa10.83□□□□□ -0.68
ITM2A-201ENST00000373298 FOXP1Q9H334 677 aaPredicted RBP10.83□□□□□ -0.68
ITM2A-201ENST00000373298 HMX1Q9NP08 348 aaPredicted RBP10.83□□□□□ -0.68
ITM2A-201ENST00000373298 VTA1Q9NP79 307 aa10.83□□□□□ -0.68
ITM2A-201ENST00000373298 KCNH7Q9NS40 1196 aa10.83□□□□□ -0.68
ITM2A-201ENST00000373298 DDX41Q9UJV9 622 aaKnown RBP10.83□□□□□ -0.68
ITM2A-201ENST00000373298 GNEQ9Y223 722 aaKnown RBP10.83□□□□□ -0.68
ITM2A-201ENST00000373298 SPATA31C2B4DYI2 1134 aa10.82□□□□□ -0.68
ITM2A-201ENST00000373298 SEPT4O43236 478 aa10.82□□□□□ -0.68
ITM2A-201ENST00000373298 TXNP10599 105 aaKnown RBP10.82□□□□□ -0.68
ITM2A-201ENST00000373298 KCNA2P16389 499 aa10.82□□□□□ -0.68
ITM2A-201ENST00000373298 CIITAP33076 1130 aa10.82□□□□□ -0.68
ITM2A-201ENST00000373298 BEX3Q00994 111 aa10.82□□□□□ -0.68
ITM2A-201ENST00000373298 SAFBQ15424 915 aaKnown RBP eCLIP10.82□□□□□ -0.68
ITM2A-201ENST00000373298 NEK8Q86SG6 692 aa10.82□□□□□ -0.68
ITM2A-201ENST00000373298 PTCD2Q8WV60 388 aaKnown RBP10.82□□□□□ -0.68
ITM2A-201ENST00000373298 TMEM60Q9H2L4 133 aa10.82□□□□□ -0.68
ITM2A-201ENST00000373298 JADE2Q9NQC1 790 aa10.82□□□□□ -0.68
ITM2A-201ENST00000373298 PCDHB6Q9Y5E3 794 aa10.82□□□□□ -0.68
ITM2A-201ENST00000373298 MYH15Q9Y2K3 1946 aa10.81□□□□□ -0.68
ITM2A-201ENST00000373298 LOC102724159A0A0B4J2E5 919 aa10.81□□□□□ -0.68
ITM2A-201ENST00000373298 MSH4O15457 936 aa10.81□□□□□ -0.68
ITM2A-201ENST00000373298 CCNT1O60563 726 aaKnown RBP10.81□□□□□ -0.68
ITM2A-201ENST00000373298 AKR1A1P14550 325 aa10.81□□□□□ -0.68
ITM2A-201ENST00000373298 ANP32AP39687 249 aaKnown RBP10.81□□□□□ -0.68
ITM2A-201ENST00000373298 TNFAIP2Q03169 654 aa10.81□□□□□ -0.68
ITM2A-201ENST00000373298 MTMR1Q13613 665 aa10.81□□□□□ -0.68
ITM2A-201ENST00000373298 PWP2Q15269 919 aaKnown RBP10.81□□□□□ -0.68
ITM2A-201ENST00000373298 ZNF174Q15697 407 aa10.81□□□□□ -0.68
ITM2A-201ENST00000373298 DMRTA1Q5VZB9 504 aa10.81□□□□□ -0.68
ITM2A-201ENST00000373298 PLA2G4DQ86XP0 818 aa10.81□□□□□ -0.68
ITM2A-201ENST00000373298 SCFD2Q8WU76 684 aa10.81□□□□□ -0.68
ITM2A-201ENST00000373298 PPP1R13LQ8WUF5 828 aa10.81□□□□□ -0.68
ITM2A-201ENST00000373298 MBOAT7Q96N66 472 aa10.81□□□□□ -0.68
ITM2A-201ENST00000373298 AGO4Q9HCK5 861 aaKnown RBP10.81□□□□□ -0.68
ITM2A-201ENST00000373298 BRMS1Q9HCU9 246 aa10.81□□□□□ -0.68
ITM2A-201ENST00000373298 DDX20Q9UHI6 824 aaKnown RBP10.81□□□□□ -0.68
ITM2A-201ENST00000373298 KIF3AQ9Y496 699 aa10.81□□□□□ -0.68
ITM2A-201ENST00000373298 SYNRGQ9UMZ2 1314 aa10.81□□□□□ -0.68
ITM2A-201ENST00000373298 TCHHQ07283 1943 aa10.81□□□□□ -0.68
ITM2A-201ENST00000373298 CYP3A7-CYP3A51PA0A087WV96 503 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 DHX15O43143 795 aaKnown RBP10.8□□□□□ -0.68
ITM2A-201ENST00000373298 DYNC1LI2O43237 492 aaPredicted RBP10.8□□□□□ -0.68
ITM2A-201ENST00000373298 ADAMTS4O75173 837 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 EN2P19622 333 aaPredicted RBP10.8□□□□□ -0.68
ITM2A-201ENST00000373298 PDCP20941 246 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 CYP3A7P24462 503 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 ICAM3P32942 547 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 ZNF76P36508 570 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 USP11P51784 963 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 ARHGAP1Q07960 439 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 GNL2Q13823 731 aaKnown RBP10.8□□□□□ -0.68
ITM2A-201ENST00000373298 HSDL1Q3SXM5 330 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 DUSP28Q4G0W2 176 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 WDR81Q562E7 1941 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 IQSEC1Q6DN90 963 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 XRRA1Q6P2D8 792 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 CYFIP1Q7L576 1253 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 TEX2Q8IWB9 1127 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 TNS4Q8IZW8 715 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 U2AF1L4Q8WU68 220 aaKnown RBP10.8□□□□□ -0.68
ITM2A-201ENST00000373298 HAS1Q92839 578 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 FAM184BQ9ULE4 1060 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 DDX39AO00148 427 aaKnown RBP10.8□□□□□ -0.68
ITM2A-201ENST00000373298 FIBPO43427 364 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 GGPS1O95749 300 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 MCM7P33993 719 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 SP4Q02446 784 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 TTLL4Q14679 1199 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 MYSM1Q5VVJ2 828 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 TLK2Q86UE8 772 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 C4orf32Q8N8J7 132 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 ETNPPLQ8TBG4 499 aa10.8□□□□□ -0.68
ITM2A-201ENST00000373298 DIS3LQ8TF46 1054 aaKnown RBP10.8□□□□□ -0.68
ITM2A-201ENST00000373298 EHMT1Q9H9B1 1298 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms