RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 DHX36Q9H2U1 1008 aaKnown RBP26.4■■□□□ 1.82
CDK9-201ENST00000373264 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.4■■□□□ 1.82
CDK9-201ENST00000373264 OPLAHO14841 1288 aa26.4■■□□□ 1.82
CDK9-201ENST00000373264 KIF11P52732 1056 aa26.4■■□□□ 1.82
CDK9-201ENST00000373264 SPIRE1Q08AE8 756 aa26.4■■□□□ 1.82
CDK9-201ENST00000373264 CATSPER3Q86XQ3 398 aa26.4■■□□□ 1.82
CDK9-201ENST00000373264 SCFD1Q8WVM8 642 aa26.4■■□□□ 1.82
CDK9-201ENST00000373264 MYH10P35580 1976 aa26.39■■□□□ 1.82
CDK9-201ENST00000373264 ZMYND10O75800 440 aa26.39■■□□□ 1.82
CDK9-201ENST00000373264 IPO7O95373 1038 aaKnown RBP26.39■■□□□ 1.82
CDK9-201ENST00000373264 VAV2P52735 878 aa26.39■■□□□ 1.82
CDK9-201ENST00000373264 TUBB2AQ13885 445 aa26.39■■□□□ 1.82
CDK9-201ENST00000373264 HYIQ5T013 277 aa26.39■■□□□ 1.82
CDK9-201ENST00000373264 CRYGNQ8WXF5 182 aa26.39■■□□□ 1.82
CDK9-201ENST00000373264 LENG9Q96B70 501 aa26.39■■□□□ 1.82
CDK9-201ENST00000373264 TUBB2BQ9BVA1 445 aa26.39■■□□□ 1.82
CDK9-201ENST00000373264 SALL4Q9UJQ4 1053 aa26.39■■□□□ 1.82
CDK9-201ENST00000373264 PSMD2Q13200 908 aa26.39■■□□□ 1.81
CDK9-201ENST00000373264 PABPC4Q13310 644 aaKnown RBP eCLIP26.39■■□□□ 1.811e-6■■■□□ 18.4
CDK9-201ENST00000373264 CCDC40Q4G0X9 1142 aa26.39■■□□□ 1.81
CDK9-201ENST00000373264 PAPD7Q5XG87 772 aaKnown RBP26.39■■□□□ 1.81
CDK9-201ENST00000373264 ETNPPLQ8TBG4 499 aa26.39■■□□□ 1.81
CDK9-201ENST00000373264 ZFP91Q96JP5 570 aaPredicted RBP26.39■■□□□ 1.81
CDK9-201ENST00000373264 IFIH1Q9BYX4 1025 aaKnown RBP26.39■■□□□ 1.81
CDK9-201ENST00000373264 PCDHA13Q9Y5I0 950 aa26.39■■□□□ 1.81
CDK9-201ENST00000373264 MOCS3O95396 460 aa26.38■■□□□ 1.81
CDK9-201ENST00000373264 ECE1P42892 770 aa26.38■■□□□ 1.81
CDK9-201ENST00000373264 CYP4A11Q02928 519 aa26.38■■□□□ 1.81
CDK9-201ENST00000373264 GFPT1Q06210 699 aaPredicted RBP26.38■■□□□ 1.81
CDK9-201ENST00000373264 KIAA1755Q5JYT7 1200 aa26.38■■□□□ 1.81
CDK9-201ENST00000373264 PURBQ96QR8 312 aaKnown RBP26.38■■□□□ 1.81
CDK9-201ENST00000373264 PSMB7Q99436 277 aa26.38■■□□□ 1.81
CDK9-201ENST00000373264 TSG101Q99816 390 aa26.38■■□□□ 1.81
CDK9-201ENST00000373264 COL4A3BPQ9Y5P4 624 aa26.38■■□□□ 1.81
CDK9-201ENST00000373264 MAP2K7O14733 419 aa26.37■■□□□ 1.81
CDK9-201ENST00000373264 N4BP1O75113 896 aaKnown RBP26.37■■□□□ 1.81
CDK9-201ENST00000373264 HNRNPH3P31942 346 aaKnown RBP26.37■■□□□ 1.81
CDK9-201ENST00000373264 USP11P51784 963 aa26.37■■□□□ 1.81
CDK9-201ENST00000373264 SLC12A3P55017 1021 aa26.37■■□□□ 1.81
CDK9-201ENST00000373264 KIF5AQ12840 1032 aa26.37■■□□□ 1.81
CDK9-201ENST00000373264 PKNOX2Q96KN3 472 aa26.37■■□□□ 1.81
CDK9-201ENST00000373264 ATP8B1O43520 1251 aa26.37■■□□□ 1.81
CDK9-201ENST00000373264 NOL4O94818 638 aa26.37■■□□□ 1.81
CDK9-201ENST00000373264 CDK17Q00537 523 aa26.37■■□□□ 1.81
CDK9-201ENST00000373264 FKBP3Q00688 224 aaKnown RBP26.37■■□□□ 1.81
CDK9-201ENST00000373264 SPA17Q15506 151 aa26.37■■□□□ 1.81
CDK9-201ENST00000373264 TMEM179Q6ZVK1 233 aa26.37■■□□□ 1.81
CDK9-201ENST00000373264 TBC1D5Q92609 795 aa26.37■■□□□ 1.81
CDK9-201ENST00000373264 AMNQ9BXJ7 453 aa26.37■■□□□ 1.81
CDK9-201ENST00000373264 NT5C3AQ9H0P0 336 aa26.37■■□□□ 1.81
CDK9-201ENST00000373264 DEF6Q9H4E7 631 aa26.37■■□□□ 1.81
CDK9-201ENST00000373264 JADE2Q9NQC1 790 aa26.37■■□□□ 1.81
CDK9-201ENST00000373264 KRT18P05783 430 aaKnown RBP26.36■■□□□ 1.81
CDK9-201ENST00000373264 SPATA31C1P0DKV0 1188 aa26.36■■□□□ 1.81
CDK9-201ENST00000373264 SECISBP2LQ93073 1101 aaKnown RBP26.36■■□□□ 1.81
CDK9-201ENST00000373264 LRRC27Q9C0I9 530 aa26.36■■□□□ 1.81
CDK9-201ENST00000373264 KCTD10Q9H3F6 313 aa26.36■■□□□ 1.81
CDK9-201ENST00000373264 PDE11AQ9HCR9 933 aa26.36■■□□□ 1.81
CDK9-201ENST00000373264 SMARCAL1Q9NZC9 954 aa26.36■■□□□ 1.81
CDK9-201ENST00000373264 KDM3AQ9Y4C1 1321 aa26.36■■□□□ 1.81
CDK9-201ENST00000373264 CYP3A7-CYP3A51PA0A087WV96 503 aa26.36■■□□□ 1.81
CDK9-201ENST00000373264 YDJCA8MPS7 323 aa26.36■■□□□ 1.81
CDK9-201ENST00000373264 AKR1B10O60218 316 aa26.36■■□□□ 1.81
CDK9-201ENST00000373264 CYP3A7P24462 503 aa26.36■■□□□ 1.81
CDK9-201ENST00000373264 MRPS25P82663 173 aaKnown RBP26.36■■□□□ 1.81
CDK9-201ENST00000373264 FBXO11Q86XK2 927 aa26.36■■□□□ 1.81
CDK9-201ENST00000373264 BMP2KQ9NSY1 1161 aaPredicted RBP26.36■■□□□ 1.81
CDK9-201ENST00000373264 L1RE1Q9UN81 338 aa26.36■■□□□ 1.81
CDK9-201ENST00000373264 ZNF646O15015 1829 aaPredicted RBP26.35■■□□□ 1.81
CDK9-201ENST00000373264 RSPH10B2B2RC85 870 aa26.35■■□□□ 1.81
CDK9-201ENST00000373264 H0YIN7 160 aa26.35■■□□□ 1.81
CDK9-201ENST00000373264 TLR2O60603 784 aa26.35■■□□□ 1.81
CDK9-201ENST00000373264 RSPH10BP0C881 870 aa26.35■■□□□ 1.81
CDK9-201ENST00000373264 ENOX2Q16206 610 aaKnown RBP26.35■■□□□ 1.81
CDK9-201ENST00000373264 SYDE2Q5VT97 1194 aa26.35■■□□□ 1.81
CDK9-201ENST00000373264 ZNF662Q6ZS27 426 aa26.35■■□□□ 1.81
CDK9-201ENST00000373264 MBOAT7Q96N66 472 aa26.35■■□□□ 1.81
CDK9-201ENST00000373264 EMILIN3Q9NT22 766 aa26.35■■□□□ 1.81
CDK9-201ENST00000373264 FGFR1OPO95684 399 aaKnown RBP26.34■■□□□ 1.81
CDK9-201ENST00000373264 POLD1P28340 1107 aa26.34■■□□□ 1.81
CDK9-201ENST00000373264 HGSNATQ68CP4 663 aa26.34■■□□□ 1.81
CDK9-201ENST00000373264 PDXDC1Q6P996 788 aa26.34■■□□□ 1.81
CDK9-201ENST00000373264 SAMD1Q6SPF0 538 aaPredicted RBP26.34■■□□□ 1.81
CDK9-201ENST00000373264 CACNA2D4Q7Z3S7 1137 aa26.34■■□□□ 1.81
CDK9-201ENST00000373264 CCDC84Q86UT8 332 aaPredicted RBP26.34■■□□□ 1.81
CDK9-201ENST00000373264 CCDC65Q8IXS2 484 aa26.34■■□□□ 1.81
CDK9-201ENST00000373264 NEK11Q8NG66 645 aa26.34■■□□□ 1.81
CDK9-201ENST00000373264 GDAP1L1Q96MZ0 367 aa26.34■■□□□ 1.81
CDK9-201ENST00000373264 CSRNP1Q96S65 589 aa26.34■■□□□ 1.81
CDK9-201ENST00000373264 IKZF4Q9H2S9 585 aa26.34■■□□□ 1.81
CDK9-201ENST00000373264 CLRN2A0PK11 232 aa26.34■■□□□ 1.81
CDK9-201ENST00000373264 TCP10L2B9ZVM9 353 aa26.34■■□□□ 1.81
CDK9-201ENST00000373264 CXCR5P32302 372 aa26.34■■□□□ 1.81
CDK9-201ENST00000373264 CDAN1Q8IWY9 1227 aa26.34■■□□□ 1.81
CDK9-201ENST00000373264 COG1Q8WTW3 980 aa26.34■■□□□ 1.81
CDK9-201ENST00000373264 HNRNPLLQ8WVV9 542 aaKnown RBP26.34■■□□□ 1.81
CDK9-201ENST00000373264 LSM14BQ9BX40 385 aaKnown RBP26.34■■□□□ 1.81
CDK9-201ENST00000373264 EHD2Q9NZN4 543 aa26.34■■□□□ 1.81
CDK9-201ENST00000373264 ARID5AQ03989 594 aa26.33■■□□□ 1.81
CDK9-201ENST00000373264 C2orf54Q08AI8 447 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms