RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 USP21Q9UK80 565 aa16.29■□□□□ 0.2
COL9A2-202ENST00000372748 CNTNAP4Q9C0A0 1308 aa16.29■□□□□ 0.2
COL9A2-202ENST00000372748 LAD1O00515 517 aa16.29■□□□□ 0.2
COL9A2-202ENST00000372748 RASA1P20936 1047 aa16.29■□□□□ 0.2
COL9A2-202ENST00000372748 SV2BQ7L1I2 683 aa16.29■□□□□ 0.2
COL9A2-202ENST00000372748 RNF10Q8N5U6 811 aaKnown RBP16.29■□□□□ 0.2
COL9A2-202ENST00000372748 AK8Q96MA6 479 aa16.29■□□□□ 0.2
COL9A2-202ENST00000372748 MAGEF1Q9HAY2 307 aa16.29■□□□□ 0.2
COL9A2-202ENST00000372748 BAG3O95817 575 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 SSBP05455 408 aaKnown RBP eCLIP16.28■□□□□ 0.2
COL9A2-202ENST00000372748 TMOD1P28289 359 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 GNAQP50148 359 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 POLR2FP61218 127 aaKnown RBP16.28■□□□□ 0.2
COL9A2-202ENST00000372748 SLC9C1Q4G0N8 1177 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 CCDC40Q4G0X9 1142 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 SPATS2Q86XZ4 545 aaKnown RBP16.28■□□□□ 0.2
COL9A2-202ENST00000372748 WDR66Q8TBY9 1149 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 IQCDQ96DY2 449 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 CALML4Q96GE6 196 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 ATXN2Q99700 1313 aaKnown RBP16.28■□□□□ 0.2
COL9A2-202ENST00000372748 ADAMTS1Q9UHI8 967 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 IRS2Q9Y4H2 1338 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 FAM107AO95990 144 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 KIAA0753Q2KHM9 967 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 SPRED3Q2MJR0 410 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 LRRC55Q6ZSA7 311 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 KLC4Q9NSK0 619 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 BLOC1S4Q9NUP1 217 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 TSKSQ9UJT2 592 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 RTCBQ9Y3I0 505 aaKnown RBP16.28■□□□□ 0.2
COL9A2-202ENST00000372748 NRAPQ86VF7 1730 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 A0A087X0T9 212 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 PALM3A6NDB9 673 aaPredicted RBP16.28■□□□□ 0.2
COL9A2-202ENST00000372748 SMCO2A6NFE2 343 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 GOLGA6L10A6NI86 522 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 FAM228BP0C875 321 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 ACTN3Q08043 901 aaPredicted RBP16.28■□□□□ 0.2
COL9A2-202ENST00000372748 SEMA3FQ13275 785 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 CDC37Q16543 378 aaPredicted RBP16.28■□□□□ 0.2
COL9A2-202ENST00000372748 FAM83BQ5T0W9 1011 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 SFMBT2Q5VUG0 894 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 MREGQ8N565 214 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 ANKS1AQ92625 1134 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 ZKSCAN4Q969J2 545 aaPredicted RBP16.28■□□□□ 0.2
COL9A2-202ENST00000372748 CYFIP2Q96F07 1278 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 INPP4AQ96PE3 977 aaPredicted RBP16.28■□□□□ 0.2
COL9A2-202ENST00000372748 UBA5Q9GZZ9 404 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 VCPKMTQ9H867 229 aa16.28■□□□□ 0.2
COL9A2-202ENST00000372748 HMGB1P1B2RPK0 211 aaPredicted RBP16.27■□□□□ 0.2
COL9A2-202ENST00000372748 ATP2C2O75185 946 aa16.27■□□□□ 0.2
COL9A2-202ENST00000372748 PPP1R2P41236 205 aa16.27■□□□□ 0.2
COL9A2-202ENST00000372748 ERVK-9P63128 1117 aa16.27■□□□□ 0.2
COL9A2-202ENST00000372748 GRB10Q13322 594 aa16.27■□□□□ 0.2
COL9A2-202ENST00000372748 NONOQ15233 471 aaKnown RBP eCLIP16.27■□□□□ 0.2
COL9A2-202ENST00000372748 BIN2Q9UBW5 565 aaPredicted RBP16.27■□□□□ 0.2
COL9A2-202ENST00000372748 CCNL1Q9UK58 526 aaPredicted RBP16.27■□□□□ 0.2
COL9A2-202ENST00000372748 SSU72P8A0A1W2PR75 194 aa16.27■□□□□ 0.19
COL9A2-202ENST00000372748 KCNK3O14649 394 aa16.27■□□□□ 0.19
COL9A2-202ENST00000372748 HSD17B3P37058 310 aa16.27■□□□□ 0.19
COL9A2-202ENST00000372748 RAPGEF1Q13905 1077 aa16.27■□□□□ 0.19
COL9A2-202ENST00000372748 NAB2Q15742 525 aa16.27■□□□□ 0.19
COL9A2-202ENST00000372748 YTHDF3Q7Z739 585 aaKnown RBP16.27■□□□□ 0.19
COL9A2-202ENST00000372748 CD302Q8IX05 232 aa16.27■□□□□ 0.19
COL9A2-202ENST00000372748 TBCKQ8TEA7 893 aa16.27■□□□□ 0.19
COL9A2-202ENST00000372748 WHAMMQ8TF30 809 aa16.27■□□□□ 0.19
COL9A2-202ENST00000372748 EYA3Q99504 573 aa16.27■□□□□ 0.19
COL9A2-202ENST00000372748 RNF14Q9UBS8 474 aa16.27■□□□□ 0.19
COL9A2-202ENST00000372748 POTEMA6NI47 508 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 NOL4O94818 638 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 BTDP43251 543 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 CDK8P49336 464 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 MEI1Q5TIA1 1274 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 DAGLBQ8NCG7 672 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 LSM14BQ9BX40 385 aaKnown RBP16.26■□□□□ 0.19
COL9A2-202ENST00000372748 AP1M1Q9BXS5 423 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 TMEM260Q9NX78 707 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 TBC1D7Q9P0N9 293 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 GCOM1H8Y6P7 765 aaPredicted RBP16.26■□□□□ 0.19
COL9A2-202ENST00000372748 MYZAPP0CAP1 466 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 QPCTQ16769 361 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 ODF2Q5BJF6 829 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 UNC13DQ70J99 1090 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 NEK8Q86SG6 692 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 FAM133AQ8N9E0 248 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 USP38Q8NB14 1042 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 CDK5RAP3Q96JB5 506 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 CCDC114Q96M63 670 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 PIGSQ96S52 555 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 NUDT12Q9BQG2 462 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 TMBIM4Q9HC24 238 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 SLC40A1Q9NP59 571 aa16.26■□□□□ 0.19
COL9A2-202ENST00000372748 GRID2IPA4D2P6 1211 aa16.25■□□□□ 0.19
COL9A2-202ENST00000372748 TRAF5O00463 557 aa16.25■□□□□ 0.19
COL9A2-202ENST00000372748 CCDC172P0C7W6 258 aa16.25■□□□□ 0.19
COL9A2-202ENST00000372748 CTNNA1P35221 906 aaKnown RBP16.25■□□□□ 0.19
COL9A2-202ENST00000372748 RDXP35241 583 aaKnown RBP16.25■□□□□ 0.19
COL9A2-202ENST00000372748 DDR1Q08345 913 aa16.25■□□□□ 0.19
COL9A2-202ENST00000372748 GUF1Q8N442 669 aaKnown RBP16.25■□□□□ 0.19
COL9A2-202ENST00000372748 LARP4BQ92615 738 aaKnown RBP16.25■□□□□ 0.19
COL9A2-202ENST00000372748 PNMA5Q96PV4 448 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms