RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 CDC27P30260 824 aa11.42□□□□□ -0.58
NUP188-201ENST00000372577 ADCY8P40145 1251 aa11.42□□□□□ -0.58
NUP188-201ENST00000372577 UBE2SQ16763 222 aa11.42□□□□□ -0.58
NUP188-201ENST00000372577 ABCB11O95342 1321 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 GRM1Q13255 1194 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 LRRC41Q15345 812 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 DALRD3Q5D0E6 543 aaKnown RBP11.41□□□□□ -0.58
NUP188-201ENST00000372577 CEP170P1Q96L14 293 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 VPS37BQ9H9H4 285 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 MRPL47Q9HD33 250 aaKnown RBP11.41□□□□□ -0.58
NUP188-201ENST00000372577 GCNT4Q9P109 453 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 DIS3Q9Y2L1 958 aaKnown RBP11.41□□□□□ -0.58
NUP188-201ENST00000372577 JCADQ9P266 1359 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 DCCP43146 1447 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 SETD1BQ9UPS6 1966 aaKnown RBP11.41□□□□□ -0.58
NUP188-201ENST00000372577 ATF2P15336 505 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 ARHGAP27Q6ZUM4 889 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 RIOK1Q9BRS2 568 aaKnown RBP11.41□□□□□ -0.58
NUP188-201ENST00000372577 GOLPH3LQ9H4A5 285 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 CD2APQ9Y5K6 639 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 CEP170BQ9Y4F5 1589 aaPredicted RBP11.41□□□□□ -0.58
NUP188-201ENST00000372577 CYP2D6P10635 497 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 KCNQ4P56696 695 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 RASA3Q14644 834 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.41□□□□□ -0.58
NUP188-201ENST00000372577 LCMT1Q9UIC8 334 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 RASSF2P50749 326 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 ATP2C1P98194 919 aaPredicted RBP11.41□□□□□ -0.58
NUP188-201ENST00000372577 SLFN12LQ6IEE8 588 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 GPIHBP1Q8IV16 184 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 CCHCR1Q8TD31 782 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 RAD54LQ92698 747 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 SPZ1Q9BXG8 430 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 SUGCTQ9HAC7 445 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 ODF2LQ9ULJ1 636 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 PCDHA6Q9UN73 950 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 PCDHA8Q9Y5H6 950 aa11.41□□□□□ -0.58
NUP188-201ENST00000372577 USP17L5A8MUK1 530 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 GUCY2FP51841 1108 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 CCDC62Q6P9F0 684 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 PALM2Q8IXS6 379 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 SYNE4Q8N205 404 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 CRAMP1Q96RY5 1269 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 SEL1LQ9UBV2 794 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 EIF4A3P38919 411 aaKnown RBP11.4□□□□□ -0.58
NUP188-201ENST00000372577 KRT12Q99456 494 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 ST7Q9NRC1 585 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 PCDHA13Q9Y5I0 950 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 PALM3A6NDB9 673 aaPredicted RBP11.4□□□□□ -0.58
NUP188-201ENST00000372577 MED7O43513 233 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 MXI1P50539 228 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 GTF2A1P52655 376 aaPredicted RBP11.4□□□□□ -0.58
NUP188-201ENST00000372577 VPS72Q15906 364 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 RINT1Q6NUQ1 792 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 C10orf67Q8IYJ2 551 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 TBC1D22BQ9NU19 505 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 CEP72Q9P209 647 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 SOWAHDA6NJG2 315 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 TLR3O15455 904 aaKnown RBP11.4□□□□□ -0.58
NUP188-201ENST00000372577 STX2P32856 288 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 CUL4BQ13620 913 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 C12orf60Q5U649 245 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 GIMAP8Q8ND71 665 aaPredicted RBP11.4□□□□□ -0.58
NUP188-201ENST00000372577 TBC1D31Q96DN5 1066 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 RSRC1Q96IZ7 334 aaKnown RBP11.4□□□□□ -0.58
NUP188-201ENST00000372577 ZNF277Q9NRM2 450 aaPredicted RBP11.4□□□□□ -0.58
NUP188-201ENST00000372577 FBXO40Q9UH90 709 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 PCDHB4Q9Y5E5 795 aa11.4□□□□□ -0.58
NUP188-201ENST00000372577 AFF2P51816 1311 aa11.4□□□□□ -0.59
NUP188-201ENST00000372577 LDHAP00338 332 aaKnown RBP11.4□□□□□ -0.59
NUP188-201ENST00000372577 TROVE2P10155 538 aaKnown RBP eCLIP11.4□□□□□ -0.591e-13■■□□□ 13.8
NUP188-201ENST00000372577 USP11P51784 963 aa11.4□□□□□ -0.59
NUP188-201ENST00000372577 BFSP1Q12934 665 aa11.4□□□□□ -0.59
NUP188-201ENST00000372577 KCNB1Q14721 858 aa11.4□□□□□ -0.59
NUP188-201ENST00000372577 BARGINQ6ZT62 677 aa11.4□□□□□ -0.59
NUP188-201ENST00000372577 STOX1Q6ZVD7 989 aa11.4□□□□□ -0.59
NUP188-201ENST00000372577 VSIG1Q86XK7 387 aa11.4□□□□□ -0.59
NUP188-201ENST00000372577 MAP3K14Q99558 947 aa11.4□□□□□ -0.59
NUP188-201ENST00000372577 CAPS2Q9BXY5 557 aa11.4□□□□□ -0.59
NUP188-201ENST00000372577 KIAA1586Q9HCI6 787 aa11.4□□□□□ -0.59
NUP188-201ENST00000372577 ANKFY1Q9P2R3 1169 aa11.4□□□□□ -0.59
NUP188-201ENST00000372577 CDC25AP30304 524 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 PRELPP51888 382 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 GUCY2DQ02846 1103 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 EAPPQ56P03 285 aaPredicted RBP11.39□□□□□ -0.59
NUP188-201ENST00000372577 ARMC9Q7Z3E5 817 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 TRIM50Q86XT4 487 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 VPS52Q8N1B4 723 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 NSUN4Q96CB9 384 aaKnown RBP11.39□□□□□ -0.59
NUP188-201ENST00000372577 CEP95Q96GE4 821 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 HERC5Q9UII4 1024 aaKnown RBP11.39□□□□□ -0.59
NUP188-201ENST00000372577 SLIT1O75093 1534 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 ANO9A1A5B4 782 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 RAD17O75943 681 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 GH2P01242 217 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 ATP1A3P13637 1013 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 IREB2P48200 963 aaKnown RBP11.39□□□□□ -0.59
NUP188-201ENST00000372577 RFX5P48382 616 aaPredicted RBP11.39□□□□□ -0.59
NUP188-201ENST00000372577 SLFNL1Q499Z3 407 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 CEP57Q86XR8 500 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms