RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 A0A1B0GVG6 124 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 OPLAHO14841 1288 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 SMIM24O75264 130 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 KIF4AO95239 1232 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 IGHA2P01877 340 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 TOP1P11387 765 aaKnown RBP9.74□□□□□ -0.85
ATG4A-203ENST00000372232 NAT1P18440 290 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 LSP1P33241 339 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 IGHMBP2P38935 993 aaKnown RBP9.74□□□□□ -0.85
ATG4A-203ENST00000372232 CTCFP49711 727 aaPredicted RBP9.74□□□□□ -0.85
ATG4A-203ENST00000372232 ELF3P78545 371 aaPredicted RBP9.74□□□□□ -0.85
ATG4A-203ENST00000372232 CEBPZQ03701 1054 aaKnown RBP9.74□□□□□ -0.85
ATG4A-203ENST00000372232 MPP3Q13368 585 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 TMED1Q13445 227 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 ANKRD20A8PQ5CZ79 823 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 AKNAD1Q5T1N1 836 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 NUGGCQ68CJ6 796 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 CCDC73Q6ZRK6 1079 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 SAMD7Q7Z3H4 446 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 AIDAQ96BJ3 306 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 GMLQ99445 158 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 MRPL44Q9H9J2 332 aaKnown RBP9.74□□□□□ -0.85
ATG4A-203ENST00000372232 ANKIB1Q9P2G1 1089 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 DENND2AQ9ULE3 1009 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 GPR75-ASB3A0A0A6YYF3 556 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 A0A1B0GVL5 298 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 CTAGE9A4FU28 777 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 DNM1LO00429 736 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 ABLIM1O14639 778 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 CREB3O43889 395 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 KIF5CO60282 957 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 NPTXRO95502 500 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 EIF4BP23588 611 aaKnown RBP9.74□□□□□ -0.85
ATG4A-203ENST00000372232 RPL13P26373 211 aaKnown RBP9.74□□□□□ -0.85
ATG4A-203ENST00000372232 GJA8P48165 433 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 BCAMP50895 628 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 GUCY1B3Q02153 619 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 FAM160A1Q05DH4 1040 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 MAP3K12Q12852 859 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 DYNC1I2Q13409 638 aaKnown RBP9.74□□□□□ -0.85
ATG4A-203ENST00000372232 ALX1Q15699 326 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 DPCR1Q3MIW9 517 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 FAM114A1Q8IWE2 563 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 MAGEB6Q8N7X4 407 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 MYCBPAPQ8TBZ2 947 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 P3H4Q92791 437 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 TBC1D31Q96DN5 1066 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 USP28Q96RU2 1077 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 SELENOOQ9BVL4 669 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 FTOQ9C0B1 505 aaKnown RBP eCLIP9.74□□□□□ -0.85
ATG4A-203ENST00000372232 SAP130Q9H0E3 1048 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 ZWILCHQ9H900 591 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 METTL5Q9NRN9 209 aaKnown RBP9.74□□□□□ -0.85
ATG4A-203ENST00000372232 WDR35Q9P2L0 1181 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 ZNF652Q9Y2D9 606 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 ASB3Q9Y575 518 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 RREB1Q92766 1687 aa9.74□□□□□ -0.85
ATG4A-203ENST00000372232 RASSF10A6NK89 507 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 CCDC175P0C221 793 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 CNGA1P29973 690 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 INHBCP55103 352 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 PTK2Q05397 1052 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 PABPC4Q13310 644 aaKnown RBP eCLIP9.73□□□□□ -0.85
ATG4A-203ENST00000372232 PTGISQ16647 500 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 CLEC4GQ6UXB4 293 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 TEX9Q8N6V9 391 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 NKX2-3Q8TAU0 364 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 OSBPL7Q9BZF2 842 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 HSD3B7Q9H2F3 369 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 NOP53Q9NZM5 478 aaKnown RBP9.73□□□□□ -0.85
ATG4A-203ENST00000372232 ANGEL1Q9UNK9 670 aaKnown RBP9.73□□□□□ -0.85
ATG4A-203ENST00000372232 ZMYM6O95789 1325 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 CPLX1O14810 134 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 NDUFB5O43674 189 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 MYO1BO43795 1136 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 PARNO95453 639 aaKnown RBP9.73□□□□□ -0.85
ATG4A-203ENST00000372232 FAM107AO95990 144 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 SCTRP47872 440 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 GNAQP50148 359 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 UBASH3AP57075 661 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 CHRNDQ07001 517 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 RBL2Q08999 1139 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 GOLGA8FQ08AF8 430 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 GOLGA8DPQ0D2H9 430 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 PABPC1LQ4VXU2 614 aaKnown RBP9.73□□□□□ -0.85
ATG4A-203ENST00000372232 KDM7AQ6ZMT4 941 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 CYB5R4Q7L1T6 521 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 NLRP14Q86W24 1093 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 TEKT4Q8WW24 435 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 CCT8L2Q96SF2 557 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 SPATA7Q9P0W8 599 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 MAPK8IP1Q9UQF2 711 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 INPP5FQ9Y2H2 1132 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 MYH7P12883 1935 aa9.73□□□□□ -0.85
ATG4A-203ENST00000372232 MYH14Q7Z406 1995 aaKnown RBP9.72□□□□□ -0.85
ATG4A-203ENST00000372232 CICQ96RK0 1608 aaPredicted RBP9.72□□□□□ -0.85
ATG4A-203ENST00000372232 STXBP3O00186 592 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 SH2B2O14492 632 aaPredicted RBP9.72□□□□□ -0.85
ATG4A-203ENST00000372232 MBD4O95243 580 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 GHRP10912 638 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms