RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 LRRC47Q8N1G4 583 aaKnown RBP12.49□□□□□ -0.41
PTCH2-201ENST00000372192 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.49□□□□□ -0.41
PTCH2-201ENST00000372192 COA7Q96BR5 231 aa12.49□□□□□ -0.41
PTCH2-201ENST00000372192 FAM84BQ96KN1 310 aaPredicted RBP12.49□□□□□ -0.41
PTCH2-201ENST00000372192 PACSIN2Q9UNF0 486 aaPredicted RBP12.49□□□□□ -0.41
PTCH2-201ENST00000372192 GCFC2P16383 781 aaKnown RBP12.49□□□□□ -0.41
PTCH2-201ENST00000372192 BTDP43251 543 aa12.49□□□□□ -0.41
PTCH2-201ENST00000372192 MEA1Q16626 185 aa12.49□□□□□ -0.41
PTCH2-201ENST00000372192 GRIPAP1Q4V328 841 aa12.49□□□□□ -0.41
PTCH2-201ENST00000372192 CCDC105Q8IYK2 499 aa12.49□□□□□ -0.41
PTCH2-201ENST00000372192 NSUN4Q96CB9 384 aaKnown RBP12.49□□□□□ -0.41
PTCH2-201ENST00000372192 CCT8L2Q96SF2 557 aa12.49□□□□□ -0.41
PTCH2-201ENST00000372192 VEZTQ9HBM0 779 aa12.49□□□□□ -0.41
PTCH2-201ENST00000372192 HOMER3Q9NSC5 361 aa12.49□□□□□ -0.41
PTCH2-201ENST00000372192 NKIRAS1Q9NYS0 192 aa12.49□□□□□ -0.41
PTCH2-201ENST00000372192 DAAM1Q9Y4D1 1078 aa12.49□□□□□ -0.41
PTCH2-201ENST00000372192 SLIT3O75094 1523 aa12.49□□□□□ -0.41
PTCH2-201ENST00000372192 EIF3BP55884 814 aaKnown RBP12.48□□□□□ -0.41
PTCH2-201ENST00000372192 CACNB1Q02641 598 aaPredicted RBP12.48□□□□□ -0.41
PTCH2-201ENST00000372192 ITIH3Q06033 890 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 EZH2Q15910 746 aaKnown RBP12.48□□□□□ -0.41
PTCH2-201ENST00000372192 ASPRV1Q53RT3 343 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 RAD54LQ92698 747 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 HDAC9Q9UKV0 1011 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 RTCBQ9Y3I0 505 aaKnown RBP12.48□□□□□ -0.41
PTCH2-201ENST00000372192 SETD1AO15047 1707 aaKnown RBP12.48□□□□□ -0.41
PTCH2-201ENST00000372192 UFL1O94874 794 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 FERP16591 822 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 TRAF1Q13077 416 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 TMC4Q7Z404 712 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 ZNF473Q8WTR7 871 aaKnown RBP12.48□□□□□ -0.41
PTCH2-201ENST00000372192 ARL8AQ96BM9 186 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 FMO2Q99518 471 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 UBXN6Q9BZV1 441 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 POLD4Q9HCU8 107 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 INTS9Q9NV88 658 aaKnown RBP12.48□□□□□ -0.41
PTCH2-201ENST00000372192 PPP4R3CPQ6ZMV5 832 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 PAXIP1Q6ZW49 1069 aaPredicted RBP12.48□□□□□ -0.41
PTCH2-201ENST00000372192 CCDC63Q8NA47 563 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 TRIM7Q9C029 511 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 FANCGO15287 622 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 HNRNPH1P31943 449 aaKnown RBP12.48□□□□□ -0.41
PTCH2-201ENST00000372192 SLC18A3Q16572 532 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 SBK1Q52WX2 424 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 SLFN12Q8IYM2 578 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 EHD2Q9NZN4 543 aa12.48□□□□□ -0.41
PTCH2-201ENST00000372192 BAZ2BQ9UIF8 2168 aaKnown RBP12.48□□□□□ -0.41
PTCH2-201ENST00000372192 ATRNO75882 1429 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 CLTAP09496 248 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 HSPA2P54652 639 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 SETDB1Q15047 1291 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 DIXDC1Q155Q3 683 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 ARHGAP44Q17R89 818 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 BRINP3Q76B58 766 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 MYCT1Q8N699 235 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 MED15Q96RN5 788 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 RIOK1Q9BRS2 568 aaKnown RBP12.47□□□□□ -0.41
PTCH2-201ENST00000372192 RNF225M0QZC1 329 aaPredicted RBP12.47□□□□□ -0.41
PTCH2-201ENST00000372192 PLA2G4BP0C869 781 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 BCRP11274 1271 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 LMNB1P20700 586 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 ATP11AP98196 1134 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 COASYQ13057 564 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 E2F5Q15329 346 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 AENQ8WTP8 325 aaKnown RBP12.47□□□□□ -0.41
PTCH2-201ENST00000372192 LTN1O94822 1766 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 PPP2R2AP63151 447 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 RIC1Q4ADV7 1423 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 SLC44A5Q8NCS7 719 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 RNPC3Q96LT9 517 aaKnown RBP12.47□□□□□ -0.41
PTCH2-201ENST00000372192 DDX47Q9H0S4 455 aaKnown RBP12.47□□□□□ -0.41
PTCH2-201ENST00000372192 ARHGAP20Q9P2F6 1191 aa12.47□□□□□ -0.41
PTCH2-201ENST00000372192 GNPATO15228 680 aa12.46□□□□□ -0.41
PTCH2-201ENST00000372192 GBP1P32455 592 aa12.46□□□□□ -0.41
PTCH2-201ENST00000372192 PLTPP55058 493 aa12.46□□□□□ -0.41
PTCH2-201ENST00000372192 CCDC174Q6PII3 467 aa12.46□□□□□ -0.41
PTCH2-201ENST00000372192 MED1Q15648 1581 aaPredicted RBP12.46□□□□□ -0.41
PTCH2-201ENST00000372192 MYMKA6NI61 221 aa12.46□□□□□ -0.41
PTCH2-201ENST00000372192 EXOC3O60645 756 aa12.46□□□□□ -0.41
PTCH2-201ENST00000372192 CDK8P49336 464 aa12.46□□□□□ -0.41
PTCH2-201ENST00000372192 KCNH2Q12809 1159 aa12.46□□□□□ -0.41
PTCH2-201ENST00000372192 C12orf60Q5U649 245 aa12.46□□□□□ -0.41
PTCH2-201ENST00000372192 WDR59Q6PJI9 974 aa12.46□□□□□ -0.41
PTCH2-201ENST00000372192 ZNF662Q6ZS27 426 aa12.46□□□□□ -0.41
PTCH2-201ENST00000372192 INTS8Q75QN2 995 aaKnown RBP12.46□□□□□ -0.41
PTCH2-201ENST00000372192 UHMK1Q8TAS1 419 aaKnown RBP12.46□□□□□ -0.41
PTCH2-201ENST00000372192 NEK9Q8TD19 979 aa12.46□□□□□ -0.41
PTCH2-201ENST00000372192 GJA10Q969M2 543 aa12.46□□□□□ -0.41
PTCH2-201ENST00000372192 ASIC3Q9UHC3 531 aa12.46□□□□□ -0.41
PTCH2-201ENST00000372192 REXO2Q9Y3B8 237 aaKnown RBP12.46□□□□□ -0.41
PTCH2-201ENST00000372192 RGPD8O14715 1765 aaPredicted RBP12.46□□□□□ -0.42
PTCH2-201ENST00000372192 PDE2AO00408 941 aaPredicted RBP12.46□□□□□ -0.42
PTCH2-201ENST00000372192 MAGOHP61326 146 aaKnown RBP12.46□□□□□ -0.42
PTCH2-201ENST00000372192 PABPC4Q13310 644 aaKnown RBP eCLIP12.46□□□□□ -0.42
PTCH2-201ENST00000372192 DRP2Q13474 957 aa12.46□□□□□ -0.42
PTCH2-201ENST00000372192 PLS1Q14651 629 aa12.46□□□□□ -0.42
PTCH2-201ENST00000372192 PRR16Q569H4 304 aa12.46□□□□□ -0.42
PTCH2-201ENST00000372192 MFSD14BQ5SR56 506 aa12.46□□□□□ -0.42
PTCH2-201ENST00000372192 HIBCHQ6NVY1 386 aaPredicted RBP12.46□□□□□ -0.42
PTCH2-201ENST00000372192 KDM7AQ6ZMT4 941 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms