RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 SBF2Q86WG5 1849 aa13.02□□□□□ -0.33
PDE6C-201ENST00000371447 CCDC51Q96ER9 411 aa13.02□□□□□ -0.33
PDE6C-201ENST00000371447 CDC23Q9UJX2 597 aa13.02□□□□□ -0.33
PDE6C-201ENST00000371447 PCDHB13Q9Y5F0 798 aa13.02□□□□□ -0.33
PDE6C-201ENST00000371447 ADAMTSL1Q8N6G6 1762 aa13.02□□□□□ -0.33
PDE6C-201ENST00000371447 MYH8P13535 1937 aa13.02□□□□□ -0.33
PDE6C-201ENST00000371447 ACTN1P12814 892 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 DPEP1P16444 411 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 SMARCA1P28370 1054 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 GFPT1Q06210 699 aaPredicted RBP13.01□□□□□ -0.33
PDE6C-201ENST00000371447 ADAM9Q13443 819 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 RAPGEF1Q13905 1077 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 PRKG1Q13976 671 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 SFR1Q86XK3 245 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 CCDC65Q8IXS2 484 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 FLAD1Q8NFF5 587 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 EMILIN3Q9NT22 766 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 DNM3Q9UQ16 869 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 SAMM50Q9Y512 469 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 MORC2Q9Y6X9 1032 aaPredicted RBP13.01□□□□□ -0.33
PDE6C-201ENST00000371447 ITIH6Q6UXX5 1313 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 EML1O00423 815 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 GCNT3O95395 438 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 PNMA6AP0CW24 399 aaPredicted RBP13.01□□□□□ -0.33
PDE6C-201ENST00000371447 CYLC1P35663 651 aaPredicted RBP13.01□□□□□ -0.33
PDE6C-201ENST00000371447 STAT2P52630 851 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 SP4Q02446 784 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 TRIM14Q14142 442 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 PDIA5Q14554 519 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 PPP4R3AQ6IN85 833 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 CENPPQ6IPU0 288 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 NEK11Q8NG66 645 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 LSM14BQ9BX40 385 aaKnown RBP13.01□□□□□ -0.33
PDE6C-201ENST00000371447 EHD2Q9NZN4 543 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 NYAP2Q9P242 653 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 CTAGE15A4D2H0 777 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 MOCS3O95396 460 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 MYL1P05976 194 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 CTAGE8P0CG41 777 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 MYBP10242 640 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 CTAGE6Q86UF2 777 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 CTAGE4Q8IX94 777 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 DNAJC19Q96DA6 116 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 IFIH1Q9BYX4 1025 aaKnown RBP13.01□□□□□ -0.33
PDE6C-201ENST00000371447 MYO6Q9UM54 1294 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.01□□□□□ -0.33
PDE6C-201ENST00000371447 LAMB1P07942 1786 aa13.01□□□□□ -0.33
PDE6C-201ENST00000371447 MSH4O15457 936 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 NCK2O43639 380 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 H2AFXP16104 143 aaPredicted RBP13□□□□□ -0.33
PDE6C-201ENST00000371447 CYP11B2P19099 503 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 CLK2P49760 499 aaKnown RBP13□□□□□ -0.33
PDE6C-201ENST00000371447 RASSF7Q02833 373 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 KIF5AQ12840 1032 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 ZNF772Q68DY9 489 aaPredicted RBP13□□□□□ -0.33
PDE6C-201ENST00000371447 GSPT2Q8IYD1 628 aaKnown RBP13□□□□□ -0.33
PDE6C-201ENST00000371447 TTLL6Q8N841 843 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 PNKPQ96T60 521 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 ZNF70Q9UC06 446 aaPredicted RBP13□□□□□ -0.33
PDE6C-201ENST00000371447 SERPINA10Q9UK55 444 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 EGFRP00533 1210 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 NR2F2P24468 414 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 NOVP48745 357 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 ZBED6P86452 979 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 BMS1Q14692 1282 aaKnown RBP13□□□□□ -0.33
PDE6C-201ENST00000371447 SKIDA1Q1XH10 827 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 SRGAP1Q7Z6B7 1085 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 DCAF4Q8WV16 495 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 AGBL1Q96MI9 1066 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 REEP2Q9BRK0 252 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 IDI2Q9BXS1 227 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 ARFGAP3Q9NP61 516 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 GJA3Q9Y6H8 435 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 UBR3Q6ZT12 1888 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 hCG_1984214I3L0E3 225 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 TUBB4AP04350 444 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 POLD1P28340 1107 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 FAM193AP78312 1265 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 ZC2HC1CQ53FD0 456 aaPredicted RBP13□□□□□ -0.33
PDE6C-201ENST00000371447 ZNF713Q8N859 430 aaPredicted RBP13□□□□□ -0.33
PDE6C-201ENST00000371447 MAGEF1Q9HAY2 307 aa13□□□□□ -0.33
PDE6C-201ENST00000371447 KRT86O43790 486 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 SASH3O75995 380 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 TNNT3P45378 269 aaPredicted RBP12.99□□□□□ -0.33
PDE6C-201ENST00000371447 FKBP3Q00688 224 aaKnown RBP12.99□□□□□ -0.33
PDE6C-201ENST00000371447 PPARDQ03181 441 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 MAN2A1Q16706 1144 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 ARSHQ5FYA8 562 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 GUF1Q8N442 669 aaKnown RBP12.99□□□□□ -0.33
PDE6C-201ENST00000371447 PURBQ96QR8 312 aaKnown RBP12.99□□□□□ -0.33
PDE6C-201ENST00000371447 RUSC1Q9BVN2 902 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 ARHGEF10LQ9HCE6 1279 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 ARHGAP20Q9P2F6 1191 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 SMCHD1A6NHR9 2005 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 PVALEFA0A1B0GWK0 134 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 ZNF263O14978 683 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 TBCAO75347 108 aaKnown RBP12.99□□□□□ -0.33
PDE6C-201ENST00000371447 MYCT1Q8N699 235 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 SCFD1Q8WVM8 642 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 MMS19Q96T76 1030 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms