RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 CD58P19256 250 aa24■■□□□ 1.43
TM9SF3-201ENST00000371142 CCNA1P78396 465 aa24■■□□□ 1.43
TM9SF3-201ENST00000371142 UBN2Q6ZU65 1347 aa24■■□□□ 1.43
TM9SF3-201ENST00000371142 BASP1P80723 227 aaKnown RBP24■■□□□ 1.43
TM9SF3-201ENST00000371142 DARS2Q6PI48 645 aaKnown RBP24■■□□□ 1.43
TM9SF3-201ENST00000371142 FNDC3AQ9Y2H6 1198 aaKnown RBP24■■□□□ 1.43
TM9SF3-201ENST00000371142 CD2BP2O95400 341 aaKnown RBP24■■□□□ 1.43
TM9SF3-201ENST00000371142 BBS5Q8N3I7 341 aa24■■□□□ 1.43
TM9SF3-201ENST00000371142 KCTD6Q8NC69 237 aa24■■□□□ 1.43
TM9SF3-201ENST00000371142 OSBP2Q969R2 916 aa24■■□□□ 1.43
TM9SF3-201ENST00000371142 SERPINB13Q9UIV8 391 aa24■■□□□ 1.43
TM9SF3-201ENST00000371142 TCP11X2Q5H9J9 407 aa24■■□□□ 1.43
TM9SF3-201ENST00000371142 DNAJC24Q6P3W2 148 aa24■■□□□ 1.43
TM9SF3-201ENST00000371142 MIGA2Q7L4E1 593 aa24■■□□□ 1.43
TM9SF3-201ENST00000371142 TMEM206Q9H813 350 aa24■■□□□ 1.43
TM9SF3-201ENST00000371142 IKBKBO14920 756 aa23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 GCFC2P16383 781 aaKnown RBP23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 MSH2P43246 934 aa23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 ZNF710Q8N1W2 664 aa23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 LINC00301Q8NCQ3 95 aa23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 CCDC197Q8NCU1 140 aa23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 TYW5A2RUC4 315 aaKnown RBP23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 PGRMC1O00264 195 aaKnown RBP23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 MGEA5O60502 916 aa23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 FKBP3Q00688 224 aaKnown RBP23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 IFT88Q13099 833 aa23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 NHEJ1Q9H9Q4 299 aaPredicted RBP23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 SPTLC3Q9NUV7 552 aa23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 TTC4O95801 387 aa23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 CACTINQ8WUQ7 758 aaKnown RBP23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 SPZ1Q9BXG8 430 aa23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 CALN1Q9BXU9 219 aa23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 TBK1Q9UHD2 729 aa23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 USP17L3A6NCW0 530 aa23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 USP17L4A6NCW7 530 aa23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 EPHB4P54760 987 aa23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 USP17L1Q7RTZ2 530 aa23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 NCAPGQ9BPX3 1015 aa23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 RWDD2AQ9UIY3 292 aa23.99■■□□□ 1.43
TM9SF3-201ENST00000371142 RAD17O75943 681 aa23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 SLFN14P0C7P3 912 aa23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 SLCO1A2P46721 670 aa23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 RNASELQ05823 741 aaKnown RBP23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 SCARA5Q6ZMJ2 495 aa23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 JPH2Q9BR39 696 aaPredicted RBP23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 EMILIN3Q9NT22 766 aa23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 PCDHB6Q9Y5E3 794 aa23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 PLCG1P19174 1290 aa23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 ADD3Q9UEY8 706 aaKnown RBP23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 ADGRL2O95490 1459 aa23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 SPECC1L-ADORA2AF8WAN1 911 aa23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 SNCBQ16143 134 aa23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 ZSWIM5Q9P217 1185 aa23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 LRFN2Q9ULH4 789 aa23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 ARHGEF18Q6ZSZ5 1173 aa23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 PARD3BQ8TEW8 1205 aa23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 EIF4A3P38919 411 aaKnown RBP23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 CC2D2BQ6DHV5 1058 aa23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 OR6B2Q6IFH4 312 aa23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 CFAP36Q96G28 342 aa23.98■■□□□ 1.43
TM9SF3-201ENST00000371142 MX2P20592 715 aa23.97■■□□□ 1.43
TM9SF3-201ENST00000371142 PLA2G4BP0C869 781 aa23.97■■□□□ 1.43
TM9SF3-201ENST00000371142 IQCB1Q15051 598 aa23.97■■□□□ 1.43
TM9SF3-201ENST00000371142 HOXA13P31271 388 aaPredicted RBP23.97■■□□□ 1.43
TM9SF3-201ENST00000371142 STX1BP61266 288 aa23.97■■□□□ 1.43
TM9SF3-201ENST00000371142 QTRT2Q9H974 415 aaKnown RBP23.97■■□□□ 1.43
TM9SF3-201ENST00000371142 ARL4AP40617 200 aa23.97■■□□□ 1.43
TM9SF3-201ENST00000371142 GOLGA8IPA6NC78 632 aa23.96■■□□□ 1.43
TM9SF3-201ENST00000371142 GOLGA8JA6NMD2 632 aa23.96■■□□□ 1.43
TM9SF3-201ENST00000371142 MED7O43513 233 aa23.96■■□□□ 1.43
TM9SF3-201ENST00000371142 SCYL3Q8IZE3 742 aa23.96■■□□□ 1.43
TM9SF3-201ENST00000371142 TMTC3Q6ZXV5 915 aa23.96■■□□□ 1.43
TM9SF3-201ENST00000371142 AIFM3Q96NN9 605 aa23.96■■□□□ 1.43
TM9SF3-201ENST00000371142 UBN1Q9NPG3 1134 aa23.96■■□□□ 1.43
TM9SF3-201ENST00000371142 SLC8A1P32418 973 aa23.96■■□□□ 1.43
TM9SF3-201ENST00000371142 CTTNQ14247 550 aaKnown RBP23.96■■□□□ 1.43
TM9SF3-201ENST00000371142 MKRN3Q13064 507 aaKnown RBP23.96■■□□□ 1.43
TM9SF3-201ENST00000371142 PAGE5Q96GU1 130 aa23.96■■□□□ 1.43
TM9SF3-201ENST00000371142 GPR101Q96P66 508 aaPredicted RBP23.96■■□□□ 1.43
TM9SF3-201ENST00000371142 OSBPL3Q9H4L5 887 aa23.96■■□□□ 1.43
TM9SF3-201ENST00000371142 PARVGQ9HBI0 331 aa23.96■■□□□ 1.43
TM9SF3-201ENST00000371142 TPX2Q9ULW0 747 aaKnown RBP23.96■■□□□ 1.43
TM9SF3-201ENST00000371142 FRMD3A2A2Y4 597 aa23.95■■□□□ 1.43
TM9SF3-201ENST00000371142 CDC37Q16543 378 aaPredicted RBP23.95■■□□□ 1.43
TM9SF3-201ENST00000371142 WDR17Q8IZU2 1322 aa23.95■■□□□ 1.42
TM9SF3-201ENST00000371142 LARGE1O95461 756 aa23.95■■□□□ 1.42
TM9SF3-201ENST00000371142 GCKP35557 465 aa23.95■■□□□ 1.42
TM9SF3-201ENST00000371142 PCDHA13Q9Y5I0 950 aa23.95■■□□□ 1.42
TM9SF3-201ENST00000371142 SPDYE2BA6NHP3 402 aa23.95■■□□□ 1.42
TM9SF3-201ENST00000371142 PRPF3O43395 683 aaKnown RBP23.95■■□□□ 1.42
TM9SF3-201ENST00000371142 SPDYE6P0CI01 402 aa23.95■■□□□ 1.42
TM9SF3-201ENST00000371142 MECOMQ03112 1051 aa23.95■■□□□ 1.42
TM9SF3-201ENST00000371142 DHX9Q08211 1270 aaKnown RBP23.95■■□□□ 1.42
TM9SF3-201ENST00000371142 THOC5Q13769 683 aaKnown RBP23.95■■□□□ 1.42
TM9SF3-201ENST00000371142 JRKLQ9Y4A0 524 aa23.95■■□□□ 1.42
TM9SF3-201ENST00000371142 ZSCAN20P17040 1043 aaPredicted RBP23.95■■□□□ 1.42
TM9SF3-201ENST00000371142 MARK3P27448 753 aa23.95■■□□□ 1.42
TM9SF3-201ENST00000371142 NLRP10Q86W26 655 aa23.95■■□□□ 1.42
TM9SF3-201ENST00000371142 MRPL47Q9HD33 250 aaKnown RBP23.95■■□□□ 1.42
TM9SF3-201ENST00000371142 ABCF3Q9NUQ8 709 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms