RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 RAD51CO43502 376 aa14.21□□□□□ -0.14
CHD1L-202ENST00000369258 PRPHP41219 470 aa14.21□□□□□ -0.14
CHD1L-202ENST00000369258 SKOR1P84550 965 aa14.21□□□□□ -0.14
CHD1L-202ENST00000369258 SPRED3Q2MJR0 410 aa14.21□□□□□ -0.14
CHD1L-202ENST00000369258 SOGA3Q5TF21 947 aa14.21□□□□□ -0.14
CHD1L-202ENST00000369258 CENPPQ6IPU0 288 aa14.21□□□□□ -0.14
CHD1L-202ENST00000369258 LRRC55Q6ZSA7 311 aa14.21□□□□□ -0.14
CHD1L-202ENST00000369258 B4GALNT4Q76KP1 1039 aa14.21□□□□□ -0.14
CHD1L-202ENST00000369258 IFT20Q8IY31 132 aa14.21□□□□□ -0.14
CHD1L-202ENST00000369258 CAVIN3Q969G5 261 aa14.21□□□□□ -0.14
CHD1L-202ENST00000369258 NOX5Q96PH1 765 aa14.21□□□□□ -0.14
CHD1L-202ENST00000369258 CAPN7Q9Y6W3 813 aa14.21□□□□□ -0.14
CHD1L-202ENST00000369258 KCNK3O14649 394 aa14.2□□□□□ -0.14
CHD1L-202ENST00000369258 SLC9A1P19634 815 aa14.2□□□□□ -0.14
CHD1L-202ENST00000369258 BTDP43251 543 aa14.2□□□□□ -0.14
CHD1L-202ENST00000369258 GNAQP50148 359 aa14.2□□□□□ -0.14
CHD1L-202ENST00000369258 CFAP221Q4G0U5 840 aa14.2□□□□□ -0.14
CHD1L-202ENST00000369258 FAM83BQ5T0W9 1011 aa14.2□□□□□ -0.14
CHD1L-202ENST00000369258 RNF187Q5TA31 235 aaPredicted RBP14.2□□□□□ -0.14
CHD1L-202ENST00000369258 CCDC84Q86UT8 332 aaPredicted RBP14.2□□□□□ -0.14
CHD1L-202ENST00000369258 AK8Q96MA6 479 aa14.2□□□□□ -0.14
CHD1L-202ENST00000369258 DDX47Q9H0S4 455 aaKnown RBP14.2□□□□□ -0.14
CHD1L-202ENST00000369258 POTEB3A0JP26 581 aa14.2□□□□□ -0.14
CHD1L-202ENST00000369258 POTECB2RU33 542 aa14.2□□□□□ -0.14
CHD1L-202ENST00000369258 GNPATO15228 680 aa14.2□□□□□ -0.14
CHD1L-202ENST00000369258 ITGA4P13612 1032 aa14.2□□□□□ -0.14
CHD1L-202ENST00000369258 MNAT1P51948 309 aa14.2□□□□□ -0.14
CHD1L-202ENST00000369258 KCNA1Q09470 495 aa14.2□□□□□ -0.14
CHD1L-202ENST00000369258 FAM98CQ17RN3 349 aaKnown RBP14.2□□□□□ -0.14
CHD1L-202ENST00000369258 POTEBQ6S5H4 581 aa14.2□□□□□ -0.14
CHD1L-202ENST00000369258 DGKHQ86XP1 1220 aa14.2□□□□□ -0.14
CHD1L-202ENST00000369258 CELF4Q9BZC1 486 aaKnown RBP14.2□□□□□ -0.14
CHD1L-202ENST00000369258 ZMYND12Q9H0C1 365 aa14.2□□□□□ -0.14
CHD1L-202ENST00000369258 NEUROG2Q9H2A3 272 aa14.2□□□□□ -0.14
CHD1L-202ENST00000369258 SEC63Q9UGP8 760 aaKnown RBP14.2□□□□□ -0.14
CHD1L-202ENST00000369258 H0YHG0 523 aa14.19□□□□□ -0.14
CHD1L-202ENST00000369258 HNRNPH1P31943 449 aaKnown RBP14.19□□□□□ -0.14
CHD1L-202ENST00000369258 HDLBPQ00341 1268 aaKnown RBP14.19□□□□□ -0.14
CHD1L-202ENST00000369258 MAN2A1Q16706 1144 aa14.19□□□□□ -0.14
CHD1L-202ENST00000369258 CEP85LQ5SZL2 805 aa14.19□□□□□ -0.14
CHD1L-202ENST00000369258 GALNT17Q6IS24 598 aa14.19□□□□□ -0.14
CHD1L-202ENST00000369258 KCNV1Q6PIU1 500 aa14.19□□□□□ -0.14
CHD1L-202ENST00000369258 SAMD1Q6SPF0 538 aaPredicted RBP14.19□□□□□ -0.14
CHD1L-202ENST00000369258 KSR1Q8IVT5 923 aa14.19□□□□□ -0.14
CHD1L-202ENST00000369258 OTUD6BQ8N6M0 293 aa14.19□□□□□ -0.14
CHD1L-202ENST00000369258 PIK3R5Q8WYR1 880 aa14.19□□□□□ -0.14
CHD1L-202ENST00000369258 SETDB2Q96T68 719 aa14.19□□□□□ -0.14
CHD1L-202ENST00000369258 KIAA1024Q9UPX6 916 aa14.19□□□□□ -0.14
CHD1L-202ENST00000369258 GLE1Q53GS7 698 aaKnown RBP14.19□□□□□ -0.14
CHD1L-202ENST00000369258 UHMK1Q8TAS1 419 aaKnown RBP14.19□□□□□ -0.14
CHD1L-202ENST00000369258 AJAP1Q9UKB5 411 aaPredicted RBP14.19□□□□□ -0.14
CHD1L-202ENST00000369258 SMIM23A6NLE4 172 aa14.19□□□□□ -0.14
CHD1L-202ENST00000369258 PPP1R11O60927 126 aaPredicted RBP14.19□□□□□ -0.14
CHD1L-202ENST00000369258 LCA5LO95447 670 aa14.19□□□□□ -0.14
CHD1L-202ENST00000369258 FGFR1OPO95684 399 aaKnown RBP14.19□□□□□ -0.14
CHD1L-202ENST00000369258 USP8P40818 1118 aa14.19□□□□□ -0.14
CHD1L-202ENST00000369258 PSMC6P62333 389 aa14.19□□□□□ -0.14
CHD1L-202ENST00000369258 PAK2Q13177 524 aa14.19□□□□□ -0.14
CHD1L-202ENST00000369258 SF3B2Q13435 895 aaKnown RBP14.19□□□□□ -0.14
CHD1L-202ENST00000369258 UBAP2Q5T6F2 1119 aaKnown RBP14.19□□□□□ -0.14
CHD1L-202ENST00000369258 PDXDC1Q6P996 788 aa14.19□□□□□ -0.14
CHD1L-202ENST00000369258 TEX11Q8IYF3 940 aa14.19□□□□□ -0.14
CHD1L-202ENST00000369258 LOC102724159A0A0B4J2E5 919 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 POLD1P28340 1107 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 CACNB3P54284 484 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 PWP2Q15269 919 aaKnown RBP14.18□□□□□ -0.14
CHD1L-202ENST00000369258 SF3B3Q15393 1217 aaKnown RBP14.18□□□□□ -0.14
CHD1L-202ENST00000369258 DCAF17Q5H9S7 520 aaPredicted RBP14.18□□□□□ -0.14
CHD1L-202ENST00000369258 TCERG1LQ5VWI1 586 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 DAGLBQ8NCG7 672 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 C6orf50Q9HD87 102 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 POTEFA5A3E0 1075 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 RIMBP2O15034 1052 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 POTEIP0CG38 1075 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 TNFRSF8P28908 595 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 CYP4A11Q02928 519 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 COASYQ13057 564 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 IFT88Q13099 833 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 HERC4Q5GLZ8 1057 aaPredicted RBP14.18□□□□□ -0.14
CHD1L-202ENST00000369258 POTEGQ6S5H5 508 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 POTEEQ6S8J3 1075 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 DPH5Q9H2P9 285 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 TSKSQ9UJT2 592 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 ZNF652Q9Y2D9 606 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 RTCBQ9Y3I0 505 aaKnown RBP14.18□□□□□ -0.14
CHD1L-202ENST00000369258 NR2E1Q9Y466 385 aa14.18□□□□□ -0.14
CHD1L-202ENST00000369258 CLIC2O15247 247 aa14.17□□□□□ -0.14
CHD1L-202ENST00000369258 PJA2O43164 708 aa14.17□□□□□ -0.14
CHD1L-202ENST00000369258 CEP104O60308 925 aa14.17□□□□□ -0.14
CHD1L-202ENST00000369258 SBK1Q52WX2 424 aa14.17□□□□□ -0.14
CHD1L-202ENST00000369258 ELMO3Q96BJ8 720 aa14.17□□□□□ -0.14
CHD1L-202ENST00000369258 CEP89Q96ST8 783 aa14.17□□□□□ -0.14
CHD1L-202ENST00000369258 E7EVH7 732 aa14.17□□□□□ -0.14
CHD1L-202ENST00000369258 MPHOSPH10O00566 681 aaKnown RBP14.17□□□□□ -0.14
CHD1L-202ENST00000369258 PTK2Q05397 1052 aa14.17□□□□□ -0.14
CHD1L-202ENST00000369258 ASTE1Q2TB18 679 aaPredicted RBP14.17□□□□□ -0.14
CHD1L-202ENST00000369258 KRT25Q7Z3Z0 450 aa14.17□□□□□ -0.14
CHD1L-202ENST00000369258 IQCKQ8N0W5 287 aa14.17□□□□□ -0.14
CHD1L-202ENST00000369258 RNF10Q8N5U6 811 aaKnown RBP14.17□□□□□ -0.14
CHD1L-202ENST00000369258 NCAPGQ9BPX3 1015 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms