RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 FAM196AQ6ZSG2 479 aa19.67■□□□□ 0.74
SNX27-202ENST00000368841 KRT27Q7Z3Y8 459 aa19.67■□□□□ 0.74
SNX27-202ENST00000368841 MAP3K15Q6ZN16 1313 aa19.67■□□□□ 0.74
SNX27-202ENST00000368841 PI4K2BG5E9Z4 385 aa19.67■□□□□ 0.74
SNX27-202ENST00000368841 MCF2LO15068 1137 aa19.67■□□□□ 0.74
SNX27-202ENST00000368841 CMA1P23946 247 aa19.67■□□□□ 0.74
SNX27-202ENST00000368841 LONP1P36776 959 aaKnown RBP19.67■□□□□ 0.74
SNX27-202ENST00000368841 MSH2P43246 934 aa19.67■□□□□ 0.74
SNX27-202ENST00000368841 STAT2P52630 851 aa19.67■□□□□ 0.74
SNX27-202ENST00000368841 MAML1Q92585 1016 aa19.67■□□□□ 0.74
SNX27-202ENST00000368841 INTS9Q9NV88 658 aaKnown RBP19.67■□□□□ 0.74
SNX27-202ENST00000368841 SRP68Q9UHB9 627 aaKnown RBP19.67■□□□□ 0.74
SNX27-202ENST00000368841 PHLDB3Q6NSJ2 640 aa19.67■□□□□ 0.74
SNX27-202ENST00000368841 PDCD6IPQ8WUM4 868 aaKnown RBP19.67■□□□□ 0.74
SNX27-202ENST00000368841 LOC102724428A0A0B4J2F2 783 aa19.66■□□□□ 0.74
SNX27-202ENST00000368841 FMNL1O95466 1100 aaPredicted RBP19.66■□□□□ 0.74
SNX27-202ENST00000368841 TRAPPC10P48553 1259 aa19.66■□□□□ 0.74
SNX27-202ENST00000368841 SIK1P57059 783 aa19.66■□□□□ 0.74
SNX27-202ENST00000368841 DPCR1Q3MIW9 517 aa19.66■□□□□ 0.74
SNX27-202ENST00000368841 SLC7A3Q8WY07 619 aa19.66■□□□□ 0.74
SNX27-202ENST00000368841 FAF1Q9UNN5 650 aaPredicted RBP19.66■□□□□ 0.74
SNX27-202ENST00000368841 KITP10721 976 aa19.66■□□□□ 0.74
SNX27-202ENST00000368841 EIF2AK2P19525 551 aaKnown RBP19.66■□□□□ 0.74
SNX27-202ENST00000368841 STX1BP61266 288 aa19.66■□□□□ 0.74
SNX27-202ENST00000368841 PPP1R9AQ9ULJ8 1098 aa19.66■□□□□ 0.74
SNX27-202ENST00000368841 MAST1Q9Y2H9 1570 aa19.66■□□□□ 0.74
SNX27-202ENST00000368841 HIPK4Q8NE63 616 aa19.66■□□□□ 0.74
SNX27-202ENST00000368841 AMNQ9BXJ7 453 aa19.66■□□□□ 0.74
SNX27-202ENST00000368841 GOLGA8MH3BSY2 632 aa19.66■□□□□ 0.74
SNX27-202ENST00000368841 STMN1P16949 149 aa19.66■□□□□ 0.74
SNX27-202ENST00000368841 TMTC3Q6ZXV5 915 aa19.66■□□□□ 0.74
SNX27-202ENST00000368841 HAUS8Q9BT25 410 aa19.66■□□□□ 0.74
SNX27-202ENST00000368841 SYDE2Q5VT97 1194 aa19.65■□□□□ 0.74
SNX27-202ENST00000368841 MLH3Q9UHC1 1453 aa19.65■□□□□ 0.74
SNX27-202ENST00000368841 MAP3K21Q5TCX8 1036 aa19.65■□□□□ 0.74
SNX27-202ENST00000368841 RSBN1LQ6PCB5 846 aaPredicted RBP19.65■□□□□ 0.74
SNX27-202ENST00000368841 KDM5AP29375 1690 aaKnown RBP19.65■□□□□ 0.74
SNX27-202ENST00000368841 ANXA13P27216 316 aa19.65■□□□□ 0.74
SNX27-202ENST00000368841 SLMAPQ14BN4 828 aa19.65■□□□□ 0.74
SNX27-202ENST00000368841 DNAJC24Q6P3W2 148 aa19.65■□□□□ 0.74
SNX27-202ENST00000368841 PUS7LQ9H0K6 701 aaKnown RBP19.65■□□□□ 0.74
SNX27-202ENST00000368841 ITM2BQ9Y287 266 aa19.65■□□□□ 0.74
SNX27-202ENST00000368841 SIX6OS1Q8N1H7 587 aa19.65■□□□□ 0.74
SNX27-202ENST00000368841 FAM8A1Q9UBU6 413 aa19.65■□□□□ 0.74
SNX27-202ENST00000368841 XDHP47989 1333 aa19.65■□□□□ 0.74
SNX27-202ENST00000368841 EEF1B2P24534 225 aaKnown RBP19.65■□□□□ 0.74
SNX27-202ENST00000368841 AIFM3Q96NN9 605 aa19.65■□□□□ 0.74
SNX27-202ENST00000368841 GINM1Q9NU53 330 aa19.65■□□□□ 0.74
SNX27-202ENST00000368841 CCDC195A0A1B0GUA6 201 aa19.64■□□□□ 0.74
SNX27-202ENST00000368841 SERPINB2P05120 415 aa19.64■□□□□ 0.74
SNX27-202ENST00000368841 SNCBQ16143 134 aa19.64■□□□□ 0.74
SNX27-202ENST00000368841 MAP7D3Q8IWC1 876 aa19.64■□□□□ 0.74
SNX27-202ENST00000368841 LRRC4Q9HBW1 653 aa19.64■□□□□ 0.74
SNX27-202ENST00000368841 SAMSN1Q9NSI8 373 aaKnown RBP19.64■□□□□ 0.74
SNX27-202ENST00000368841 PPFIA2O75334 1257 aa19.64■□□□□ 0.74
SNX27-202ENST00000368841 FBXW4P57775 412 aa19.64■□□□□ 0.74
SNX27-202ENST00000368841 ZNF449Q6P9G9 518 aa19.64■□□□□ 0.73
SNX27-202ENST00000368841 DSTYKQ6XUX3 929 aa19.64■□□□□ 0.73
SNX27-202ENST00000368841 HOXB7P09629 217 aa19.64■□□□□ 0.73
SNX27-202ENST00000368841 IL9RQ01113 521 aa19.64■□□□□ 0.73
SNX27-202ENST00000368841 PIGOQ8TEQ8 1089 aa19.64■□□□□ 0.73
SNX27-202ENST00000368841 ZBTB1Q9Y2K1 713 aa19.64■□□□□ 0.73
SNX27-202ENST00000368841 NUP153P49790 1475 aaKnown RBP19.64■□□□□ 0.73
SNX27-202ENST00000368841 GOLGA8CPA6NN73 597 aa19.64■□□□□ 0.73
SNX27-202ENST00000368841 TCP11Q8WWU5 503 aa19.64■□□□□ 0.73
SNX27-202ENST00000368841 MAP2K2P36507 400 aa19.63■□□□□ 0.73
SNX27-202ENST00000368841 RPGRIP1Q96KN7 1286 aa19.63■□□□□ 0.73
SNX27-202ENST00000368841 CYTH2Q99418 400 aa19.63■□□□□ 0.73
SNX27-202ENST00000368841 LSG1Q9H089 658 aaKnown RBP19.63■□□□□ 0.73
SNX27-202ENST00000368841 SUCLA2Q9P2R7 463 aaPredicted RBP19.63■□□□□ 0.73
SNX27-202ENST00000368841 TRIM67Q6ZTA4 783 aa19.63■□□□□ 0.73
SNX27-202ENST00000368841 ABCC10Q5T3U5 1492 aa19.63■□□□□ 0.73
SNX27-202ENST00000368841 KIF19Q2TAC6 998 aa19.63■□□□□ 0.73
SNX27-202ENST00000368841 P2RX5Q93086 422 aa19.63■□□□□ 0.73
SNX27-202ENST00000368841 DBNLQ9UJU6 430 aaKnown RBP19.63■□□□□ 0.73
SNX27-202ENST00000368841 SUFUQ9UMX1 484 aa19.63■□□□□ 0.73
SNX27-202ENST00000368841 H0YCG3 227 aa19.63■□□□□ 0.73
SNX27-202ENST00000368841 ARL4AP40617 200 aa19.63■□□□□ 0.73
SNX27-202ENST00000368841 Q9H521 79 aa19.63■□□□□ 0.73
SNX27-202ENST00000368841 EVI5O60447 810 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 HADHAP40939 763 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 PPP2R5EQ16537 467 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 ZBED2Q9BTP6 218 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 NHEJ1Q9H9Q4 299 aaPredicted RBP19.62■□□□□ 0.73
SNX27-202ENST00000368841 KCNG1Q9UIX4 513 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 GDAQ9Y2T3 454 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 ORC6Q9Y5N6 252 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 RASIP1Q5U651 963 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 TEX2Q8IWB9 1127 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 OR6B3Q8NGW1 331 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 ZNF341Q9BYN7 854 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 PCDHA5Q9Y5H7 936 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 LRRD1A4D1F6 860 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 ECEL1O95672 775 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 PCCAP05165 728 aaPredicted RBP19.62■□□□□ 0.73
SNX27-202ENST00000368841 PRPSAP2O60256 369 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 PMLP29590 882 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 SLC12A6Q9UHW9 1150 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 SUGT1Q9Y2Z0 365 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 KCNA1Q09470 495 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms