RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 PDE6AP16499 860 aa19.63■□□□□ 0.73
CHTOP-201ENST00000368686 RNASE9P60153 205 aaKnown RBP19.63■□□□□ 0.73
CHTOP-201ENST00000368686 EHHADHQ08426 723 aa19.63■□□□□ 0.73
CHTOP-201ENST00000368686 PDXDC1Q6P996 788 aa19.63■□□□□ 0.73
CHTOP-201ENST00000368686 DDX42Q86XP3 938 aaKnown RBP eCLIP19.63■□□□□ 0.73
CHTOP-201ENST00000368686 LRRC34Q8IZ02 419 aa19.63■□□□□ 0.73
CHTOP-201ENST00000368686 RPUSD2Q8IZ73 545 aaKnown RBP19.63■□□□□ 0.73
CHTOP-201ENST00000368686 GALNT15Q8N3T1 639 aa19.63■□□□□ 0.73
CHTOP-201ENST00000368686 BORCS6Q96GS4 357 aa19.63■□□□□ 0.73
CHTOP-201ENST00000368686 ZNF512BQ96KM6 892 aaPredicted RBP19.63■□□□□ 0.73
CHTOP-201ENST00000368686 FAM167BQ9BTA0 163 aa19.63■□□□□ 0.73
CHTOP-201ENST00000368686 ECT2Q9H8V3 914 aa19.63■□□□□ 0.73
CHTOP-201ENST00000368686 ANKIB1Q9P2G1 1089 aa19.63■□□□□ 0.73
CHTOP-201ENST00000368686 LRRD1A4D1F6 860 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 PRDM1O75626 825 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 UBOX5O94941 541 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 MCM7P33993 719 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 NAALADL2Q58DX5 795 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 SPICE1Q8N0Z3 855 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 BAP1Q92560 729 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 ELAC2Q9BQ52 826 aaKnown RBP19.62■□□□□ 0.73
CHTOP-201ENST00000368686 MMRN2Q9H8L6 949 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 ABCF3Q9NUQ8 709 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 PNMA2Q9UL42 364 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 WFS1O76024 890 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 PDE6BP35913 854 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 MMP13P45452 471 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 MAP3K12Q12852 859 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 TBC1D25Q3MII6 688 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 MTHFD1LQ6UB35 978 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 ARHGAP27Q6ZUM4 889 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 PRCCQ92733 491 aaPredicted RBP19.62■□□□□ 0.73
CHTOP-201ENST00000368686 EEF2KMTQ96G04 330 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 PBKQ96KB5 322 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 RAB17Q9H0T7 212 aa19.62■□□□□ 0.73
CHTOP-201ENST00000368686 PIH1D3Q9NQM4 214 aaKnown RBP19.62■□□□□ 0.73
CHTOP-201ENST00000368686 MYH1P12882 1939 aa19.61■□□□□ 0.73
CHTOP-201ENST00000368686 NPTXRO95502 500 aa19.61■□□□□ 0.73
CHTOP-201ENST00000368686 FLT3P36888 993 aa19.61■□□□□ 0.73
CHTOP-201ENST00000368686 MRPS35P82673 323 aaKnown RBP19.61■□□□□ 0.73
CHTOP-201ENST00000368686 PSMD2Q13200 908 aa19.61■□□□□ 0.73
CHTOP-201ENST00000368686 NPY5RQ15761 445 aa19.61■□□□□ 0.73
CHTOP-201ENST00000368686 GNPTABQ3T906 1256 aa19.61■□□□□ 0.73
CHTOP-201ENST00000368686 TTC5Q8N0Z6 440 aa19.61■□□□□ 0.73
CHTOP-201ENST00000368686 ACTRT1Q8TDG2 376 aa19.61■□□□□ 0.73
CHTOP-201ENST00000368686 KLHL29Q96CT2 875 aa19.61■□□□□ 0.73
CHTOP-201ENST00000368686 KBTBD4Q9NVX7 518 aa19.61■□□□□ 0.73
CHTOP-201ENST00000368686 TCRBV5S4A2TA0A5A2 114 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 MSH2P43246 934 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 DHX9Q08211 1270 aaKnown RBP19.6■□□□□ 0.73
CHTOP-201ENST00000368686 LAMB3Q13751 1172 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 GALNTL6Q49A17 601 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 TDRD12Q587J7 1177 aaKnown RBP19.6■□□□□ 0.73
CHTOP-201ENST00000368686 TMC4Q7Z404 712 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 CNKSR2Q8WXI2 1034 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 ARHGEF3Q9NR81 526 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 RGL1Q9NZL6 768 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 SPATA31A3Q5VYP0 1347 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 DPPA5A6NC42 116 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 CCDC188H7C350 402 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 KIF4AO95239 1232 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 VIMP08670 466 aaKnown RBP19.6■□□□□ 0.73
CHTOP-201ENST00000368686 CNGA1P29973 690 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 COPS2P61201 443 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 FUT2Q10981 343 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 SLC9C1Q4G0N8 1177 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 CCDC178Q5BJE1 867 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 HGSNATQ68CP4 663 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 LMNTD2Q8IXW0 634 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 SELENOSQ9BQE4 189 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 ADAM22Q9P0K1 906 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 PACSIN2Q9UNF0 486 aaPredicted RBP19.6■□□□□ 0.73
CHTOP-201ENST00000368686 ABCB11O95342 1321 aa19.6■□□□□ 0.73
CHTOP-201ENST00000368686 NUP188Q5SRE5 1749 aa19.59■□□□□ 0.73
CHTOP-201ENST00000368686 TTC36A6NLP5 189 aa19.59■□□□□ 0.73
CHTOP-201ENST00000368686 KLRC1P26715 233 aa19.59■□□□□ 0.73
CHTOP-201ENST00000368686 MXRA7P84157 204 aa19.59■□□□□ 0.73
CHTOP-201ENST00000368686 RPS6KA1Q15418 735 aa19.59■□□□□ 0.73
CHTOP-201ENST00000368686 MAN2A1Q16706 1144 aa19.59■□□□□ 0.73
CHTOP-201ENST00000368686 CMPK2Q5EBM0 449 aa19.59■□□□□ 0.73
CHTOP-201ENST00000368686 PGM2Q96G03 612 aa19.59■□□□□ 0.73
CHTOP-201ENST00000368686 FAM114A2Q9NRY5 505 aa19.59■□□□□ 0.73
CHTOP-201ENST00000368686 SLC4A4Q9Y6R1 1079 aa19.59■□□□□ 0.73
CHTOP-201ENST00000368686 V9GY48 417 aaPredicted RBP19.59■□□□□ 0.73
CHTOP-201ENST00000368686 KCNK3O14649 394 aa19.59■□□□□ 0.73
CHTOP-201ENST00000368686 KRT16P08779 473 aa19.59■□□□□ 0.73
CHTOP-201ENST00000368686 BNIP1Q12981 228 aa19.59■□□□□ 0.73
CHTOP-201ENST00000368686 LBRQ14739 615 aaKnown RBP19.59■□□□□ 0.73
CHTOP-201ENST00000368686 PIK3AP1Q6ZUJ8 805 aa19.59■□□□□ 0.73
CHTOP-201ENST00000368686 MAGEF1Q9HAY2 307 aa19.59■□□□□ 0.73
CHTOP-201ENST00000368686 INTS9Q9NV88 658 aaKnown RBP19.59■□□□□ 0.73
CHTOP-201ENST00000368686 PPFIA2O75334 1257 aa19.58■□□□□ 0.73
CHTOP-201ENST00000368686 PDE6CP51160 858 aa19.58■□□□□ 0.73
CHTOP-201ENST00000368686 SGSM1Q2NKQ1 1148 aa19.58■□□□□ 0.73
CHTOP-201ENST00000368686 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.58■□□□□ 0.73
CHTOP-201ENST00000368686 TEKT4Q8WW24 435 aa19.58■□□□□ 0.73
CHTOP-201ENST00000368686 SEC14L1Q92503 715 aa19.58■□□□□ 0.73
CHTOP-201ENST00000368686 PAIP2Q9BPZ3 127 aaKnown RBP19.58■□□□□ 0.73
CHTOP-201ENST00000368686 RNF41Q9H4P4 317 aaPredicted RBP19.58■□□□□ 0.73
CHTOP-201ENST00000368686 SLITRK6Q9H5Y7 841 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms