RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 TRAF5O00463 557 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 USP2O75604 605 aaPredicted RBP11.85□□□□□ -0.51
TPM3-212ENST00000368533 POLR2MP0CAP2 368 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 GUCY2CP25092 1073 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 BACE1P56817 501 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 ASIC1P78348 528 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 MAP1SQ66K74 1059 aaPredicted RBP11.85□□□□□ -0.51
TPM3-212ENST00000368533 DPY19L2Q6NUT2 758 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 ENOX1Q8TC92 643 aaKnown RBP11.85□□□□□ -0.51
TPM3-212ENST00000368533 NCAPGQ9BPX3 1015 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 SH2D3AQ9BRG2 576 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 FEM1BQ9UK73 627 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 SSC5DA1L4H1 1573 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 POTEFA5A3E0 1075 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 FANCGO15287 622 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 FCER1AP12319 257 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 MYCLP12524 364 aaPredicted RBP11.85□□□□□ -0.51
TPM3-212ENST00000368533 CCT6AP40227 531 aaKnown RBP11.85□□□□□ -0.51
TPM3-212ENST00000368533 MMP14P50281 582 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 MAP3K10Q02779 954 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 GRB10Q13322 594 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 TTC31Q49AM3 519 aaPredicted RBP11.85□□□□□ -0.51
TPM3-212ENST00000368533 PPP1R18Q6NYC8 613 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 POTEGQ6S5H5 508 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 POTEEQ6S8J3 1075 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.85□□□□□ -0.51
TPM3-212ENST00000368533 PRPF38AQ8NAV1 312 aaKnown RBP11.85□□□□□ -0.51
TPM3-212ENST00000368533 FAM212AQ96EL1 285 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 RANBP17Q9H2T7 1088 aaKnown RBP11.85□□□□□ -0.51
TPM3-212ENST00000368533 ZSWIM4Q9H7M6 989 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 H3BQF6 201 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 TEX33O43247 280 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 TREML2Q5T2D2 321 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 GADL1Q6ZQY3 521 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 TOGARAM2Q6ZUX3 1019 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 CALML4Q96GE6 196 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 PNMA5Q96PV4 448 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 L2HGDHQ9H9P8 463 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 LZTFL1Q9NQ48 299 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 KIAA1024Q9UPX6 916 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 CEP350Q5VT06 3117 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 DNAH12Q6ZR08 3092 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 TULP1O00294 542 aaPredicted RBP11.84□□□□□ -0.51
TPM3-212ENST00000368533 ZBTB39O15060 712 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 RPN1P04843 607 aaKnown RBP11.84□□□□□ -0.51
TPM3-212ENST00000368533 EPHX2P34913 555 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 FAM193AP78312 1265 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 SP4Q02446 784 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 FILIP1LQ4L180 1135 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 KRT79Q5XKE5 535 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 BANK1Q8NDB2 785 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 KIAA1683Q9H0B3 1180 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 BCAS3Q9H6U6 928 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 BMP2KQ9NSY1 1161 aaPredicted RBP11.84□□□□□ -0.51
TPM3-212ENST00000368533 ARGLU1Q9NWB6 273 aaPredicted RBP11.84□□□□□ -0.51
TPM3-212ENST00000368533 RGL1Q9NZL6 768 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 SYNRGQ9UMZ2 1314 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 WDR46O15213 610 aaKnown RBP11.84□□□□□ -0.51
TPM3-212ENST00000368533 SARSP49591 514 aaKnown RBP11.84□□□□□ -0.51
TPM3-212ENST00000368533 DNAJC21Q5F1R6 531 aaKnown RBP11.84□□□□□ -0.51
TPM3-212ENST00000368533 SH3RF1Q7Z6J0 888 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 IGSF22Q8N9C0 903 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 GLIS3Q8NEA6 775 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 WDR18Q9BV38 432 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 SLC39A2Q9NP94 309 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 KCND1Q9NSA2 647 aa11.84□□□□□ -0.51
TPM3-212ENST00000368533 MSH4O15457 936 aa11.83□□□□□ -0.52
TPM3-212ENST00000368533 PSMC6P62333 389 aa11.83□□□□□ -0.52
TPM3-212ENST00000368533 MTF1Q14872 753 aa11.83□□□□□ -0.52
TPM3-212ENST00000368533 LRRC41Q15345 812 aa11.83□□□□□ -0.52
TPM3-212ENST00000368533 TRIML1Q8N9V2 468 aa11.83□□□□□ -0.52
TPM3-212ENST00000368533 PAGR1Q9BTK6 254 aa11.83□□□□□ -0.52
TPM3-212ENST00000368533 R3HDMLQ9H3Y0 253 aa11.83□□□□□ -0.52
TPM3-212ENST00000368533 CWC15Q9P013 229 aaKnown RBP11.83□□□□□ -0.52
TPM3-212ENST00000368533 AKR1B15C9JRZ8 316 aaPredicted RBP11.83□□□□□ -0.52
TPM3-212ENST00000368533 IRF6O14896 467 aa11.83□□□□□ -0.52
TPM3-212ENST00000368533 PHACTR2O75167 634 aa11.83□□□□□ -0.52
TPM3-212ENST00000368533 ARP10275 920 aa11.83□□□□□ -0.52
TPM3-212ENST00000368533 KCNJ6P48051 423 aa11.83□□□□□ -0.52
TPM3-212ENST00000368533 SUPT20HL1Q3ZLR7 823 aa11.83□□□□□ -0.52
TPM3-212ENST00000368533 SNRNP48Q6IEG0 339 aaKnown RBP11.83□□□□□ -0.52
TPM3-212ENST00000368533 FAM160B2Q86V87 743 aa11.83□□□□□ -0.52
TPM3-212ENST00000368533 TC2NQ8N9U0 490 aa11.83□□□□□ -0.52
TPM3-212ENST00000368533 VPS18Q9P253 973 aa11.83□□□□□ -0.52
TPM3-212ENST00000368533 MED24O75448 989 aa11.82□□□□□ -0.52
TPM3-212ENST00000368533 PRPHP41219 470 aa11.82□□□□□ -0.52
TPM3-212ENST00000368533 RPS6P62753 249 aaKnown RBP11.82□□□□□ -0.52
TPM3-212ENST00000368533 CTTNQ14247 550 aaKnown RBP11.82□□□□□ -0.52
TPM3-212ENST00000368533 GOLGA5Q8TBA6 731 aa11.82□□□□□ -0.52
TPM3-212ENST00000368533 LENG9Q96B70 501 aa11.82□□□□□ -0.52
TPM3-212ENST00000368533 TAAR1Q96RJ0 339 aa11.82□□□□□ -0.52
TPM3-212ENST00000368533 WDR24Q96S15 920 aa11.82□□□□□ -0.52
TPM3-212ENST00000368533 BLOC1S4Q9NUP1 217 aa11.82□□□□□ -0.52
TPM3-212ENST00000368533 PPP1R9AQ9ULJ8 1098 aa11.82□□□□□ -0.52
TPM3-212ENST00000368533 MRPL11Q9Y3B7 192 aaKnown RBP11.82□□□□□ -0.52
TPM3-212ENST00000368533 SNCAIPQ9Y6H5 919 aa11.82□□□□□ -0.52
TPM3-212ENST00000368533 SOWAHDA6NJG2 315 aa11.82□□□□□ -0.52
TPM3-212ENST00000368533 EML1O00423 815 aa11.82□□□□□ -0.52
TPM3-212ENST00000368533 LAD1O00515 517 aa11.82□□□□□ -0.52
TPM3-212ENST00000368533 GTPBP6O43824 516 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms