RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 PIK3CAP42336 1068 aa13.45□□□□□ -0.26
PTPRK-203ENST00000368207 PSMD2Q13200 908 aa13.45□□□□□ -0.26
PTPRK-203ENST00000368207 PPP2R5AQ15172 486 aa13.45□□□□□ -0.26
PTPRK-203ENST00000368207 GCNT4Q9P109 453 aa13.45□□□□□ -0.26
PTPRK-203ENST00000368207 GOLGA8IPA6NC78 632 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 GOLGA8JA6NMD2 632 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 GFPT2O94808 682 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 EIF4A3P38919 411 aaKnown RBP13.44□□□□□ -0.26
PTPRK-203ENST00000368207 PRCPP42785 496 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 SNX16P57768 344 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 YWHAEP62258 255 aaKnown RBP13.44□□□□□ -0.26
PTPRK-203ENST00000368207 ZBED6P86452 979 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 DPH5Q9H2P9 285 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 NKIRAS1Q9NYS0 192 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 EFCAB8A8MWE9 144 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 VIMP08670 466 aaKnown RBP13.44□□□□□ -0.26
PTPRK-203ENST00000368207 IREB2P48200 963 aaKnown RBP13.44□□□□□ -0.26
PTPRK-203ENST00000368207 MESDQ14696 234 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 MIS18BP1Q6P0N0 1132 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 FBF1Q8TES7 1133 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 PPP1R16BQ96T49 567 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 OSBPL5Q9H0X9 879 aaPredicted RBP13.44□□□□□ -0.26
PTPRK-203ENST00000368207 CDC23Q9UJX2 597 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 AKT3Q9Y243 479 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 KDM6AO15550 1401 aaPredicted RBP13.44□□□□□ -0.26
PTPRK-203ENST00000368207 MST1RQ04912 1400 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 GAS8O95995 478 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 LACTBP83111 547 aaPredicted RBP13.44□□□□□ -0.26
PTPRK-203ENST00000368207 Q3C1V9 767 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 SCYL2Q6P3W7 929 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 UNC13DQ70J99 1090 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 DEPDC5O75140 1603 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 OSBPP22059 807 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 OAS2P29728 719 aaKnown RBP13.44□□□□□ -0.26
PTPRK-203ENST00000368207 NSFP46459 744 aaKnown RBP13.44□□□□□ -0.26
PTPRK-203ENST00000368207 PTK2Q05397 1052 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 SF3A3Q12874 501 aaKnown RBP eCLIP13.44□□□□□ -0.261e-6■■■■□ 21.5
PTPRK-203ENST00000368207 KRT71Q3SY84 523 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 ANKS4BQ8N8V4 417 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 MTMR4Q9NYA4 1195 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 CNTNAP4Q9C0A0 1308 aa13.44□□□□□ -0.26
PTPRK-203ENST00000368207 FERP16591 822 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 MARK3P27448 753 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 STAT3P40763 770 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 PPM1FP49593 454 aaPredicted RBP13.43□□□□□ -0.26
PTPRK-203ENST00000368207 PEX3P56589 373 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 MXRA7P84157 204 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 LRRC63Q05C16 580 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 PPP2R5DQ14738 602 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 ARMC9Q7Z3E5 817 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 SREK1Q8WXA9 508 aaKnown RBP13.43□□□□□ -0.26
PTPRK-203ENST00000368207 SCAF8Q9UPN6 1271 aaKnown RBP13.43□□□□□ -0.26
PTPRK-203ENST00000368207 POTEFA5A3E0 1075 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 POTEIP0CG38 1075 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 FDPSP14324 419 aaKnown RBP13.43□□□□□ -0.26
PTPRK-203ENST00000368207 ATF7P17544 494 aaPredicted RBP13.43□□□□□ -0.26
PTPRK-203ENST00000368207 OSTNP61366 133 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 POTEGQ6S5H5 508 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 POTEEQ6S8J3 1075 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 CXCR5P32302 372 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 MTMR1Q13613 665 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 SNRNP48Q6IEG0 339 aaKnown RBP13.43□□□□□ -0.26
PTPRK-203ENST00000368207 SFR1Q86XK3 245 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 BANK1Q8NDB2 785 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 TMEM206Q9H813 350 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 MXI1P50539 228 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 MFAP3P55082 362 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 SBK1Q52WX2 424 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 CCDC121Q6ZUS5 278 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 TTLL3Q9Y4R7 772 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 ABCB11O95342 1321 aa13.43□□□□□ -0.26
PTPRK-203ENST00000368207 ARHGEF28Q8N1W1 1705 aaKnown RBP13.42□□□□□ -0.26
PTPRK-203ENST00000368207 NDUFAB1O14561 156 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 NDUFA10O95299 355 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 CTDNEP1O95476 244 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 STAMBPO95630 424 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 TFAMQ00059 246 aaKnown RBP13.42□□□□□ -0.26
PTPRK-203ENST00000368207 MB21D1Q8N884 522 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 PCDHB4Q9Y5E5 795 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 BZW2Q9Y6E2 419 aaKnown RBP13.42□□□□□ -0.26
PTPRK-203ENST00000368207 ATP2C1P98194 919 aaPredicted RBP13.42□□□□□ -0.26
PTPRK-203ENST00000368207 BRD3Q15059 726 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 STRIP1Q5VSL9 837 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 SARM1Q6SZW1 724 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 HACE1Q8IYU2 909 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 SLC10A4Q96EP9 437 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 NHEJ1Q9H9Q4 299 aaPredicted RBP13.42□□□□□ -0.26
PTPRK-203ENST00000368207 RNF146Q9NTX7 359 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 ADAMTS1Q9UHI8 967 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 SERPINA10Q9UK55 444 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 PABPN1LA6NDY0 278 aaKnown RBP13.42□□□□□ -0.26
PTPRK-203ENST00000368207 CDC42EP5Q6NZY7 148 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 USP49Q70CQ1 688 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 RAB17Q9H0T7 212 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 UBE2TQ9NPD8 197 aaPredicted RBP13.42□□□□□ -0.26
PTPRK-203ENST00000368207 SAMD15Q9P1V8 674 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 SUGT1Q9Y2Z0 365 aa13.42□□□□□ -0.26
PTPRK-203ENST00000368207 HGSO14964 777 aaPredicted RBP13.41□□□□□ -0.26
PTPRK-203ENST00000368207 ZMYND10O75800 440 aa13.41□□□□□ -0.26
PTPRK-203ENST00000368207 PSAPP07602 524 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms