RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CCDC170Q8IYT3 715 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 ETNPPLQ8TBG4 499 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 PANK4Q9NVE7 773 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 ZBTB21Q9ULJ3 1066 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 PRR12Q9ULL5 1215 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 RABGAP1Q9Y3P9 1069 aa15.57■□□□□ 0.08
USF1-202ENST00000368020 TTC26A0AVF1 554 aa15.56■□□□□ 0.08
USF1-202ENST00000368020 B4DLN1 442 aa15.56■□□□□ 0.08
USF1-202ENST00000368020 IPO7O95373 1038 aaKnown RBP15.56■□□□□ 0.08
USF1-202ENST00000368020 RPA1P27694 616 aa15.56■□□□□ 0.08
USF1-202ENST00000368020 CYLC1P35663 651 aaPredicted RBP15.56■□□□□ 0.08
USF1-202ENST00000368020 MAP3K9P80192 1104 aa15.56■□□□□ 0.08
USF1-202ENST00000368020 COASYQ13057 564 aa15.56■□□□□ 0.08
USF1-202ENST00000368020 MEA1Q16626 185 aa15.56■□□□□ 0.08
USF1-202ENST00000368020 NBPF12Q5TAG4 269 aaPredicted RBP15.56■□□□□ 0.08
USF1-202ENST00000368020 ZNF662Q6ZS27 426 aa15.56■□□□□ 0.08
USF1-202ENST00000368020 EHBP1Q8NDI1 1231 aa15.56■□□□□ 0.08
USF1-202ENST00000368020 DNAJC19Q96DA6 116 aa15.56■□□□□ 0.08
USF1-202ENST00000368020 CEP63Q96MT8 703 aa15.56■□□□□ 0.08
USF1-202ENST00000368020 DESI2Q9BSY9 194 aa15.56■□□□□ 0.08
USF1-202ENST00000368020 SEMA6BQ9H3T3 888 aa15.56■□□□□ 0.08
USF1-202ENST00000368020 GINM1Q9NU53 330 aa15.56■□□□□ 0.08
USF1-202ENST00000368020 SCAF8Q9UPN6 1271 aaKnown RBP15.56■□□□□ 0.08
USF1-202ENST00000368020 PLA2G4BP0C869 781 aa15.55■□□□□ 0.08
USF1-202ENST00000368020 MUTP22033 750 aa15.55■□□□□ 0.08
USF1-202ENST00000368020 FKBP3Q00688 224 aaKnown RBP15.55■□□□□ 0.08
USF1-202ENST00000368020 MTF1Q14872 753 aa15.55■□□□□ 0.08
USF1-202ENST00000368020 SHROOM1Q2M3G4 852 aaPredicted RBP15.55■□□□□ 0.08
USF1-202ENST00000368020 USH1GQ495M9 461 aa15.55■□□□□ 0.08
USF1-202ENST00000368020 PRR16Q569H4 304 aa15.55■□□□□ 0.08
USF1-202ENST00000368020 LDHDQ86WU2 507 aa15.55■□□□□ 0.08
USF1-202ENST00000368020 UBXN4Q92575 508 aa15.55■□□□□ 0.08
USF1-202ENST00000368020 KIFC2Q96AC6 838 aa15.55■□□□□ 0.08
USF1-202ENST00000368020 NUDT12Q9BQG2 462 aa15.55■□□□□ 0.08
USF1-202ENST00000368020 TTYH3Q9C0H2 523 aa15.55■□□□□ 0.08
USF1-202ENST00000368020 MRPL44Q9H9J2 332 aaKnown RBP15.55■□□□□ 0.08
USF1-202ENST00000368020 ARGLU1Q9NWB6 273 aaPredicted RBP15.55■□□□□ 0.08
USF1-202ENST00000368020 KIAA1024Q9UPX6 916 aa15.55■□□□□ 0.08
USF1-202ENST00000368020 DNM3Q9UQ16 869 aa15.55■□□□□ 0.08
USF1-202ENST00000368020 MRPL11Q9Y3B7 192 aaKnown RBP15.55■□□□□ 0.08
USF1-202ENST00000368020 ATAD5Q96QE3 1844 aa15.55■□□□□ 0.08
USF1-202ENST00000368020 PHF20L1A8MW92 1017 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 NDUFA10O95299 355 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 ASNSP08243 561 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 ERVK-24P63145 666 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 VWA3BQ502W6 1294 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 MIIPQ5JXC2 388 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 MIGA2Q7L4E1 593 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 KCNK18Q7Z418 384 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 UBE2Q2Q8WVN8 375 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 EDEM3Q9BZQ6 932 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 RANBP17Q9H2T7 1088 aaKnown RBP15.54■□□□□ 0.08
USF1-202ENST00000368020 HAUS4Q9H6D7 363 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 VCPKMTQ9H867 229 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 ZNF112Q9UJU3 913 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 FEM1BQ9UK73 627 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 MRFAP1Q9Y605 127 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 EPN1Q9Y6I3 576 aaPredicted RBP15.54■□□□□ 0.08
USF1-202ENST00000368020 A0A1W2PRG0 241 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 FRMD3A2A2Y4 597 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 SLURP2P0DP57 97 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 ZNF76P36508 570 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 SPIRE1Q08AE8 756 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 GPBP1Q86WP2 473 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 PCMTD1Q96MG8 357 aaPredicted RBP15.54■□□□□ 0.08
USF1-202ENST00000368020 WDR24Q96S15 920 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 POLR3CQ9BUI4 534 aaPredicted RBP15.54■□□□□ 0.08
USF1-202ENST00000368020 ZNF341Q9BYN7 854 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 NDST4Q9H3R1 872 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 NMRK2Q9NPI5 230 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 LZTFL1Q9NQ48 299 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 PNMA2Q9UL42 364 aa15.54■□□□□ 0.08
USF1-202ENST00000368020 CTAGE9A4FU28 777 aa15.53■□□□□ 0.08
USF1-202ENST00000368020 GCOM1H8Y6P7 765 aaPredicted RBP15.53■□□□□ 0.08
USF1-202ENST00000368020 CTNND1O60716 968 aaKnown RBP15.53■□□□□ 0.08
USF1-202ENST00000368020 KRT18P05783 430 aaKnown RBP15.53■□□□□ 0.08
USF1-202ENST00000368020 POLR2MP0CAP2 368 aa15.53■□□□□ 0.08
USF1-202ENST00000368020 CAP2P40123 477 aa15.53■□□□□ 0.08
USF1-202ENST00000368020 ELF2Q15723 593 aa15.53■□□□□ 0.08
USF1-202ENST00000368020 TXLNBQ8N3L3 684 aa15.53■□□□□ 0.08
USF1-202ENST00000368020 LENG9Q96B70 501 aa15.53■□□□□ 0.08
USF1-202ENST00000368020 NUCKS1Q9H1E3 243 aaKnown RBP15.53■□□□□ 0.08
USF1-202ENST00000368020 CLEC11AQ9Y240 323 aa15.53■□□□□ 0.08
USF1-202ENST00000368020 POTEB3A0JP26 581 aa15.52■□□□□ 0.08
USF1-202ENST00000368020 ADM5C9JUS6 153 aa15.52■□□□□ 0.08
USF1-202ENST00000368020 SSBP05455 408 aaKnown RBP eCLIP15.52■□□□□ 0.08
USF1-202ENST00000368020 HNRNPH3P31942 346 aaKnown RBP15.52■□□□□ 0.08
USF1-202ENST00000368020 NF2P35240 595 aa15.52■□□□□ 0.08
USF1-202ENST00000368020 SLC12A3P55017 1021 aa15.52■□□□□ 0.08
USF1-202ENST00000368020 MARSP56192 900 aaKnown RBP15.52■□□□□ 0.08
USF1-202ENST00000368020 SETQ01105 290 aaPredicted RBP15.52■□□□□ 0.08
USF1-202ENST00000368020 ECM1Q16610 540 aa15.52■□□□□ 0.08
USF1-202ENST00000368020 EDRF1Q3B7T1 1238 aa15.52■□□□□ 0.08
USF1-202ENST00000368020 ZCWPW2Q504Y3 356 aa15.52■□□□□ 0.08
USF1-202ENST00000368020 POTEBQ6S5H4 581 aa15.52■□□□□ 0.08
USF1-202ENST00000368020 LRRC55Q6ZSA7 311 aa15.52■□□□□ 0.08
USF1-202ENST00000368020 CEP112Q8N8E3 955 aa15.52■□□□□ 0.08
USF1-202ENST00000368020 SYT2Q8N9I0 419 aaPredicted RBP15.52■□□□□ 0.08
USF1-202ENST00000368020 FAM184BQ9ULE4 1060 aa15.52■□□□□ 0.08
USF1-202ENST00000368020 COL4A3BPQ9Y5P4 624 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms