RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ERVK-24P63145 666 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 ATP2C1P98194 919 aaPredicted RBP12.85□□□□□ -0.35
USF1-201ENST00000368019 AKAP17AQ02040 695 aaKnown RBP12.85□□□□□ -0.35
USF1-201ENST00000368019 GRIN1Q05586 938 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 SEC23AQ15436 765 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 HSP90B2PQ58FF3 399 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 MORN1Q5T089 497 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 USP17L2Q6R6M4 530 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 SLC35F6Q8N357 371 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 NOC3LQ8WTT2 800 aaKnown RBP12.85□□□□□ -0.35
USF1-201ENST00000368019 SOCS4Q8WXH5 440 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 BBXQ8WY36 941 aaPredicted RBP12.85□□□□□ -0.35
USF1-201ENST00000368019 C12orf42Q96LP6 360 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 GDF15Q99988 308 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 NUDT12Q9BQG2 462 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 EHD4Q9H223 541 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 PORCNQ9H237 461 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 A0A0C4DFX4 3053 aa12.85□□□□□ -0.35
USF1-201ENST00000368019 SOX1O00570 391 aaPredicted RBP12.84□□□□□ -0.35
USF1-201ENST00000368019 DDAH1O94760 285 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 CLSTN1O94985 981 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 MBD4O95243 580 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 GH2P01242 217 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 FGRP09769 529 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 PRKAR2AP13861 404 aaKnown RBP12.84□□□□□ -0.35
USF1-201ENST00000368019 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
USF1-201ENST00000368019 CASP14P31944 242 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 GUCY1A2P33402 732 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 PPP1R2P41236 205 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 CASP8Q14790 479 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 MTF1Q14872 753 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 E2F4Q16254 413 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 ZNF658Q5TYW1 1059 aaPredicted RBP12.84□□□□□ -0.35
USF1-201ENST00000368019 ARL6IP4Q66PJ3 421 aaKnown RBP12.84□□□□□ -0.35
USF1-201ENST00000368019 TRAPPC11Q7Z392 1133 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 CERS3Q8IU89 383 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 CCDC148Q8NFR7 591 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 GTF3C2Q8WUA4 911 aaPredicted RBP12.84□□□□□ -0.35
USF1-201ENST00000368019 ESR2Q92731 530 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 TNFRSF25Q93038 417 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 TRIM34Q9BYJ4 488 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 EPC1Q9H2F5 836 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 ABCB6Q9NP58 842 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 MYO6Q9UM54 1294 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 KCNJ14Q9UNX9 436 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 RLFQ13129 1914 aa12.84□□□□□ -0.35
USF1-201ENST00000368019 NAV1Q8NEY1 1877 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 ANO9A1A5B4 782 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 MYO1CO00159 1063 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 CNMDO75829 334 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 LMAN1P49257 510 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 USP14P54578 494 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 ITIH3Q06033 890 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 CACNB2Q08289 660 aaPredicted RBP12.83□□□□□ -0.36
USF1-201ENST00000368019 FUT2Q10981 343 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 PAK1Q13153 545 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 KCNB1Q14721 858 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 KRT31Q15323 416 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 PAPD7Q5XG87 772 aaKnown RBP12.83□□□□□ -0.36
USF1-201ENST00000368019 GPR142Q7Z601 462 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 MAGEB6Q8N7X4 407 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 GOLGA6L1Q8N7Z2 621 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 MIGA1Q8NAN2 632 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 RETREG2Q8NC44 543 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 PNKPQ96T60 521 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 RIOK1Q9BRS2 568 aaKnown RBP12.83□□□□□ -0.36
USF1-201ENST00000368019 UBAC1Q9BSL1 405 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 MYL10Q9BUA6 226 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 FAM107BQ9H098 131 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 PDE11AQ9HCR9 933 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 CABP5Q9NP86 173 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 LZTFL1Q9NQ48 299 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 SERPINB13Q9UIV8 391 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 RABGAP1Q9Y3P9 1069 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 PFASO15067 1338 aa12.83□□□□□ -0.36
USF1-201ENST00000368019 LAMA2P24043 3122 aaKnown RBP12.82□□□□□ -0.36
USF1-201ENST00000368019 N4BP3O15049 544 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 COL6A1P12109 1028 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 EEF1GP26641 437 aaKnown RBP12.82□□□□□ -0.36
USF1-201ENST00000368019 TDO2P48775 406 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 KRT83P78385 493 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 CDK17Q00537 523 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 CTDSPL2Q05D32 466 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 PPARAQ07869 468 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 NR5A1Q13285 461 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 PKN1Q16512 942 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 CCL14Q16627 93 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 SPECC1Q5M775 1068 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 TTC38Q5R3I4 469 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 LHX8Q68G74 356 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 IQCEQ6IPM2 695 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 LBX2Q6XYB7 198 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 CATSPERGQ6ZRH7 1159 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 PLEKHH3Q7Z736 793 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 C7orf61Q8IZ16 206 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 SYMPKQ92797 1274 aaKnown RBP12.82□□□□□ -0.36
USF1-201ENST00000368019 NUP58Q9BVL2 599 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 KIAA1683Q9H0B3 1180 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 C11orf49Q9H6J7 331 aa12.82□□□□□ -0.36
USF1-201ENST00000368019 MAGEF1Q9HAY2 307 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms