RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 NNTQ13423 1086 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 ZNF827Q17R98 1081 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 MCF2L2Q86YR7 1114 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 LARGE2Q8N3Y3 721 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 ANKRD36BP1Q96IX9 119 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 USP28Q96RU2 1077 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 HINFPQ9BQA5 517 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 RWDD2AQ9UIY3 292 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 hCG_1984214I3L0E3 225 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 MYO1CO00159 1063 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 PDE8AO60658 829 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 MESDQ14696 234 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 CASP8Q14790 479 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 RSRC2Q7L4I2 434 aaKnown RBP7.88□□□□□ -1.15
SYNE1-208ENST00000367256 ZNF713Q8N859 430 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-208ENST00000367256 NUDCD1Q96RS6 583 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 SNX25Q9H3E2 840 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 PYCARDQ9ULZ3 195 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 CARMIL3Q8ND23 1372 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 DR1Q01658 176 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 KIF19Q2TAC6 998 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 FMO2Q99518 471 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 ERBB4Q15303 1308 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 ENC1O14682 589 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 ATXN8OSP0DMR3 200 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 TNFAIP1Q13829 316 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 KRT39Q6A163 491 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 PDXDC1Q6P996 788 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 IP6K1Q92551 441 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 GJA10Q969M2 543 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 TEKT3Q9BXF9 490 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 STOML1Q9UBI4 398 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 MAGED2Q9UNF1 606 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-208ENST00000367256 TNNQ9UQP3 1299 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 POLR1AO95602 1720 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-208ENST00000367256 WDR64B1ANS9 1081 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 MT-ND3P03897 115 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 GAP43P17677 238 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 NEK8Q86SG6 692 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 CCDC127Q96BQ5 260 aa7.88□□□□□ -1.15
SYNE1-208ENST00000367256 BAZ2BQ9UIF8 2168 aaKnown RBP7.87□□□□□ -1.15
SYNE1-208ENST00000367256 PLTPP55058 493 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 OCRLQ01968 901 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 CAV1Q03135 178 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 TBCCQ15814 346 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 RNF207Q6ZRF8 634 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 PCGF5Q86SE9 256 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 ING2Q9H160 280 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 COG4Q9H9E3 785 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 TLK1Q9UKI8 766 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 ZMYND10O75800 440 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 BASP1P80723 227 aaKnown RBP7.87□□□□□ -1.15
SYNE1-208ENST00000367256 ZBED6P86452 979 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 PTK2Q05397 1052 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 SLC35F6Q8N357 371 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 RMDN2Q96LZ7 410 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 TUBGCP2Q9BSJ2 902 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 SCG2P13521 617 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 NEK2P51955 445 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 MFSD14BQ5SR56 506 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 PPP4R4Q6NUP7 873 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 FRA10AC1Q70Z53 315 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 PI4K2BQ8TCG2 481 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 EPB41L5Q9HCM4 733 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 ARHGEF5Q12774 1597 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 HLA-DPA1P20036 260 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 PRKG1Q13976 671 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 KRT24Q2M2I5 525 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 ARMCX5Q6P1M9 558 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 ENOX1Q8TC92 643 aaKnown RBP7.87□□□□□ -1.15
SYNE1-208ENST00000367256 PAGR1Q9BTK6 254 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 MYO1FO00160 1098 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 ZFXP17010 805 aaPredicted RBP7.87□□□□□ -1.15
SYNE1-208ENST00000367256 OCA2Q04671 838 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 MAN2A1Q16706 1144 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 SZRD1Q7Z422 152 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 DHX38Q92620 1227 aaKnown RBP7.87□□□□□ -1.15
SYNE1-208ENST00000367256 NT5C1BQ96P26 610 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 ZBTB18Q99592 522 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 TMEM60Q9H2L4 133 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 HACD3Q9P035 362 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 SEPT9Q9UHD8 586 aaPredicted RBP7.87□□□□□ -1.15
SYNE1-208ENST00000367256 ADAMTS12P58397 1594 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 MED7O43513 233 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 SERPINI2O75830 405 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 CDC37Q16543 378 aaPredicted RBP7.87□□□□□ -1.15
SYNE1-208ENST00000367256 CCNYQ8ND76 341 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 ANTXR1Q9H6X2 564 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 MRPL11Q9Y3B7 192 aaKnown RBP7.87□□□□□ -1.15
SYNE1-208ENST00000367256 SLFN14P0C7P3 912 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 TAC1P20366 129 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 NDUFA8P51970 172 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 TRIM60Q495X7 471 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 ODR4Q5SWX8 454 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 APLFQ8IW19 511 aaPredicted RBP7.87□□□□□ -1.15
SYNE1-208ENST00000367256 SUPT20HQ8NEM7 779 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 NEUROG2Q9H2A3 272 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 NR2F2P24468 414 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 POLA2Q14181 598 aa7.87□□□□□ -1.15
SYNE1-208ENST00000367256 ACBD5Q5T8D3 534 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms