RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 ASIC1P78348 528 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 PPP1R7Q15435 360 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 CCDC122Q5T0U0 273 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 RRAGBQ5VZM2 374 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 CATSPER4Q7RTX7 472 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 KRT25Q7Z3Z0 450 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 SCG3Q8WXD2 468 aaKnown RBP9.35□□□□□ -0.91
SYNE1-206ENST00000367253 STAMQ92783 540 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 RNF208Q9H0X6 261 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 STRIP2Q9ULQ0 834 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 USP17L12C9JPN9 530 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 USP17L21D6R901 530 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 DMWDQ09019 674 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 SLFN13Q68D06 897 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 CAPRIN2Q6IMN6 1127 aaKnown RBP9.35□□□□□ -0.91
SYNE1-206ENST00000367253 CEP70Q8NHQ1 597 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 TGFBRAP1Q8WUH2 860 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 CASP10Q92851 521 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 TEKT3Q9BXF9 490 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 CNOT7Q9UIV1 285 aaKnown RBP9.35□□□□□ -0.91
SYNE1-206ENST00000367253 PPP1R9AQ9ULJ8 1098 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 EXOC6BQ9Y2D4 811 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 NEXMIFQ5QGS0 1516 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 ROBO2Q9HCK4 1378 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 LIG4P49917 911 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 IFRD2Q12894 506 aaPredicted RBP9.35□□□□□ -0.91
SYNE1-206ENST00000367253 GRAPQ13588 217 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 FAM182BQ5T319 152 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 THNSL1Q8IYQ7 743 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 GRAPLQ8TC17 118 aaPredicted RBP9.35□□□□□ -0.91
SYNE1-206ENST00000367253 HVCN1Q96D96 273 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 CLMNQ96JQ2 1002 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 DNM3Q9UQ16 869 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 IBTKQ9P2D0 1353 aaPredicted RBP9.35□□□□□ -0.91
SYNE1-206ENST00000367253 USP17L15C9J2P7 530 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 USP17L13C9JLJ4 530 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 USP17L11C9JVI0 530 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 USP17L18D6R9N7 530 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 USP17L22D6RA61 530 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 USP17L17D6RBQ6 530 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 USP17L19D6RCP7 530 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 USP17L20D6RJB6 530 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 WDR46O15213 610 aaKnown RBP9.35□□□□□ -0.91
SYNE1-206ENST00000367253 SART1O43290 800 aaKnown RBP9.35□□□□□ -0.91
SYNE1-206ENST00000367253 P4HBP07237 508 aaKnown RBP9.35□□□□□ -0.91
SYNE1-206ENST00000367253 USP17L24Q0WX57 530 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 ASPHQ12797 758 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 MAP7D3Q8IWC1 876 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 TBC1D19Q8N5T2 526 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 TMEM169Q96HH4 297 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 TBC1D32Q96NH3 1257 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 CCSER2Q9H7U1 834 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 PARVBQ9HBI1 364 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 ATP6V0A2Q9Y487 856 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 PALLDQ8WX93 1383 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 RNF113AO15541 343 aaKnown RBP9.35□□□□□ -0.91
SYNE1-206ENST00000367253 SNUPNO95149 360 aaKnown RBP9.35□□□□□ -0.91
SYNE1-206ENST00000367253 PAX7P23759 505 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 NT5C2P49902 561 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 KCNH2Q12809 1159 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 USH1GQ495M9 461 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 ANKRD20A3Q5VUR7 823 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 ARMC6Q6NXE6 501 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 TMEM199Q8N511 208 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 MRPS27Q92552 414 aaKnown RBP9.35□□□□□ -0.91
SYNE1-206ENST00000367253 RPGRIP1Q96KN7 1286 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 EIF2AQ9BY44 585 aaKnown RBP9.35□□□□□ -0.91
SYNE1-206ENST00000367253 HMX1Q9NP08 348 aaPredicted RBP9.35□□□□□ -0.91
SYNE1-206ENST00000367253 LZTS1Q9Y250 596 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 PCDHB12Q9Y5F1 795 aa9.35□□□□□ -0.91
SYNE1-206ENST00000367253 PREX1Q8TCU6 1659 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 GOLGA8JA6NMD2 632 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 GOLGA8TH3BQL2 631 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 ACTN4O43707 911 aaKnown RBP9.34□□□□□ -0.91
SYNE1-206ENST00000367253 HOXC6P09630 235 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 GOLGA8HP0CJ92 632 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 SKIP12755 728 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 PMS1P54277 932 aaKnown RBP9.34□□□□□ -0.91
SYNE1-206ENST00000367253 TBC1D8BQ0IIM8 1120 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 SURF1Q15526 300 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 SNCBQ16143 134 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 GEN1Q17RS7 908 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 NECAB2Q7Z6G3 386 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 SNRNP27Q8WVK2 155 aaKnown RBP9.34□□□□□ -0.91
SYNE1-206ENST00000367253 OSBP2Q969R2 916 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 ACSF2Q96CM8 615 aaPredicted RBP9.34□□□□□ -0.91
SYNE1-206ENST00000367253 MMS19Q96T76 1030 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 YME1L1Q96TA2 773 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 PAG1Q9NWQ8 432 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 RNF123Q5XPI4 1314 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 ELF2Q15723 593 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 RILPL1Q5EBL4 403 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 MEI1Q5TIA1 1274 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 C8orf74Q6P047 294 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 DTHD1Q6ZMT9 781 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 TSGA10Q9BZW7 698 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 DACT1Q9NYF0 836 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 SBNO1A3KN83 1393 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 E2F6O75461 281 aa9.34□□□□□ -0.91
SYNE1-206ENST00000367253 ARPC4P59998 168 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms