RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 JAK3P52333 1124 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 CCNA1P78396 465 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 FOXP4Q8IVH2 680 aaPredicted RBP13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 CTAGE3PQ8IX95 158 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 ELOA2Q8IYF1 753 aaPredicted RBP13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 FRMPD2Q68DX3 1309 aaPredicted RBP13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 INHBAP08476 426 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 TOB2Q14106 344 aaPredicted RBP13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 FAM196AQ6ZSG2 479 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 TTLL11Q8NHH1 800 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 HVCN1Q96D96 273 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 PUS7LQ9H0K6 701 aaKnown RBP13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 NRXN1Q9ULB1 1477 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 ATP5HO75947 161 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 PFKFB3Q16875 520 aaPredicted RBP13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 PNPLA7Q6ZV29 1317 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 A6NJR5 290 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 DEUP1Q05D60 604 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 PSMD1Q99460 953 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 BMP3P12645 472 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 FBXO41Q8TF61 875 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 ZNF512BQ96KM6 892 aaPredicted RBP13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 GBP5Q96PP8 586 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 BUB1O43683 1085 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 GIMAP8Q8ND71 665 aaPredicted RBP13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 SERPINA10Q9UK55 444 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 MIS18BP1Q6P0N0 1132 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 COA1Q9GZY4 146 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 SLIT1O75093 1534 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 RPUSD2Q8IZ73 545 aaKnown RBP13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 MLXIPQ9HAP2 919 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 CLEC11AQ9Y240 323 aa13.04□□□□□ -0.32
CDC42BPA-203ENST00000366766 SMCR8Q8TEV9 937 aaPredicted RBP13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 ANKRD36BP1Q96IX9 119 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 ZNF148Q9UQR1 794 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 PFASO15067 1338 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 SETSIPP0DME0 302 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 MXI1P50539 228 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 SGO2Q562F6 1265 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 LCORLQ8N3X6 602 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 BAIAP2L1Q9UHR4 511 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 NRBP1Q9UHY1 535 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 PNMA6AP0CW24 399 aaPredicted RBP13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 MCAMP43121 646 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 FGFR1OP2Q9NVK5 253 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 TMEM179Q6ZVK1 233 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 FMR1NBQ8N0W7 255 aaPredicted RBP13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 ZBTB1Q9Y2K1 713 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 PCDHA13Q9Y5I0 950 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 MAPK4P31152 587 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 KCNB1Q14721 858 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 TTC25Q96NG3 672 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 PUS3Q9BZE2 481 aaKnown RBP13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 EMILIN3Q9NT22 766 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 HSPA2P54652 639 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 NR5A1Q13285 461 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 PRPSAP1Q14558 356 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 DBN1Q16643 649 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 FAM20AQ96MK3 541 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 FAM96AQ9H5X1 160 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 ABHD10Q9NUJ1 306 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 DLATP10515 647 aaKnown RBP13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 CLCN6P51797 869 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 CASP8Q14790 479 aa13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 SRRM1Q8IYB3 904 aaKnown RBP13.03□□□□□ -0.32
CDC42BPA-203ENST00000366766 PALM3A6NDB9 673 aaPredicted RBP13.02□□□□□ -0.32
CDC42BPA-203ENST00000366766 CMTR1Q8N1G2 835 aaKnown RBP13.02□□□□□ -0.32
CDC42BPA-203ENST00000366766 TTI1O43156 1089 aa13.02□□□□□ -0.32
CDC42BPA-203ENST00000366766 CCND2P30279 289 aa13.02□□□□□ -0.32
CDC42BPA-203ENST00000366766 TACO1Q9BSH4 297 aaKnown RBP13.02□□□□□ -0.32
CDC42BPA-203ENST00000366766 NACA2Q9H009 215 aa13.02□□□□□ -0.32
CDC42BPA-203ENST00000366766 PLA2G4BP0C869 781 aa13.02□□□□□ -0.32
CDC42BPA-203ENST00000366766 NPR1P16066 1061 aa13.02□□□□□ -0.32
CDC42BPA-203ENST00000366766 ZNF653Q96CK0 615 aa13.02□□□□□ -0.32
CDC42BPA-203ENST00000366766 ST7Q9NRC1 585 aa13.02□□□□□ -0.32
CDC42BPA-203ENST00000366766 GRAPQ13588 217 aa13.02□□□□□ -0.32
CDC42BPA-203ENST00000366766 MCPH1Q8NEM0 835 aa13.02□□□□□ -0.32
CDC42BPA-203ENST00000366766 GRAPLQ8TC17 118 aaPredicted RBP13.02□□□□□ -0.32
CDC42BPA-203ENST00000366766 CAPN9O14815 690 aa13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 ALAS1P13196 640 aa13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 NR1D1P20393 614 aa13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 EPB41L5Q9HCM4 733 aa13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 EIF4A3P38919 411 aaKnown RBP13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 RPS6KA2Q15349 733 aa13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 DRC3Q9H069 523 aa13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 ASAP1Q9ULH1 1129 aa13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 SYDE2Q5VT97 1194 aa13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 RCSD1Q6JBY9 416 aa13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 MAEAQ7L5Y9 396 aa13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 NOC2LQ9Y3T9 749 aaKnown RBP13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 ORC4O43929 436 aa13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 LDHAP00338 332 aaKnown RBP13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 ATP1A2P50993 1020 aa13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 MYO1EQ12965 1108 aa13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 TRPC5Q9UL62 973 aaPredicted RBP13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 MYCBPQ99417 103 aaPredicted RBP13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 PARD6BQ9BYG5 372 aa13.02□□□□□ -0.33
CDC42BPA-203ENST00000366766 LRRIQ4A6NIV6 560 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms